Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2V:B30:B60
Extra
PDB:
ATOM 1 O3' G A 29 -15.752 37.748 2.671 1.00 35.48 O
ATOM 2 P A A 30 -15.066 36.476 3.352 1.00 41.05 P
ATOM 3 OP1 A A 30 -16.142 35.511 3.667 1.00 37.29 O
ATOM 4 OP2 A A 30 -14.154 36.957 4.414 1.00 32.67 O
ATOM 5 O5' A A 30 -14.193 35.853 2.168 1.00 37.65 O
ATOM 6 C5' A A 30 -14.828 35.381 0.989 1.00 36.77 C
ATOM 7 C4' A A 30 -13.908 34.401 0.289 1.00 37.22 C
ATOM 8 O4' A A 30 -12.653 35.059 -0.023 1.00 33.47 O
ATOM 9 C3' A A 30 -13.546 33.182 1.134 1.00 34.02 C
ATOM 10 O3' A A 30 -13.877 31.980 0.448 1.00 41.85 O
ATOM 11 C2' A A 30 -12.042 33.307 1.358 1.00 37.40 C
ATOM 12 O2' A A 30 -11.390 32.050 1.388 1.00 43.32 O
ATOM 13 C1' A A 30 -11.634 34.096 0.123 1.00 36.78 C
ATOM 14 N9 A A 30 -10.338 34.753 0.254 1.00 34.45 N
ATOM 15 C8 A A 30 -9.715 35.122 1.411 1.00 33.89 C
ATOM 16 N7 A A 30 -8.547 35.689 1.223 1.00 35.69 N
ATOM 17 C5 A A 30 -8.395 35.694 -0.155 1.00 35.51 C
ATOM 18 C6 A A 30 -7.364 36.158 -0.998 1.00 32.06 C
ATOM 19 N6 A A 30 -6.245 36.734 -0.549 1.00 30.81 N
ATOM 20 N1 A A 30 -7.530 36.004 -2.329 1.00 31.52 N
ATOM 21 C2 A A 30 -8.650 35.424 -2.777 1.00 34.69 C
ATOM 22 N3 A A 30 -9.684 34.949 -2.084 1.00 33.39 N
ATOM 23 C4 A A 30 -9.491 35.116 -0.767 1.00 33.45 C
ATOM 24 P A A 31 -15.213 31.193 0.842 1.00 46.67 P
ATOM 25 OP1 A A 31 -15.294 31.172 2.320 1.00 41.91 O
ATOM 26 OP2 A A 31 -15.233 29.923 0.084 1.00 47.71 O
ATOM 27 O5' A A 31 -16.382 32.147 0.306 1.00 43.64 O
TER
ATOM 1 O3' G B 59 -1.738 38.632 -3.143 1.00 30.34 O
ATOM 2 P C B 60 -2.508 37.597 -2.204 1.00 31.51 P
ATOM 3 OP1 C B 60 -2.320 36.244 -2.773 1.00 35.57 O
ATOM 4 OP2 C B 60 -3.871 38.131 -1.995 1.00 28.46 O
ATOM 5 O5' C B 60 -1.684 37.664 -0.832 1.00 32.43 O
ATOM 6 C5' C B 60 -2.253 38.260 0.330 1.00 32.57 C
ATOM 7 C4' C B 60 -1.212 39.056 1.097 1.00 32.40 C
ATOM 8 O4' C B 60 -0.038 38.242 1.341 1.00 32.16 O
ATOM 9 C3' C B 60 -0.684 40.267 0.345 1.00 30.27 C
ATOM 10 O3' C B 60 -1.544 41.374 0.550 1.00 31.35 O
ATOM 11 C2' C B 60 0.674 40.475 1.003 1.00 34.03 C
ATOM 12 O2' C B 60 0.583 41.149 2.244 1.00 37.00 O
ATOM 13 C1' C B 60 1.130 39.034 1.208 1.00 34.15 C
ATOM 14 N1 C B 60 1.937 38.525 0.067 1.00 33.64 N
ATOM 15 C2 C B 60 3.228 39.027 -0.127 1.00 36.22 C
ATOM 16 O2 C B 60 3.667 39.878 0.657 1.00 36.20 O
ATOM 17 N3 C B 60 3.962 38.564 -1.167 1.00 31.60 N
ATOM 18 C4 C B 60 3.451 37.646 -1.990 1.00 32.33 C
ATOM 19 N4 C B 60 4.217 37.225 -3.001 1.00 29.84 N
ATOM 20 C5 C B 60 2.136 37.124 -1.811 1.00 28.51 C
ATOM 21 C6 C B 60 1.420 37.588 -0.780 1.00 32.93 C
ATOM 22 P C B 61 -1.642 42.523 -0.561 1.00 31.40 P
ATOM 23 OP1 C B 61 -2.712 43.446 -0.134 1.00 29.04 O
ATOM 24 OP2 C B 61 -1.702 41.894 -1.898 1.00 32.27 O
ATOM 25 O5' C B 61 -0.241 43.277 -0.431 1.00 35.04 O
TER
ATOM 2 P A A 30 -15.066 36.476 3.352 1.00 41.05 P
ATOM 3 OP1 A A 30 -16.142 35.511 3.667 1.00 37.29 O
ATOM 4 OP2 A A 30 -14.154 36.957 4.414 1.00 32.67 O
ATOM 5 O5' A A 30 -14.193 35.853 2.168 1.00 37.65 O
ATOM 6 C5' A A 30 -14.828 35.381 0.989 1.00 36.77 C
ATOM 7 C4' A A 30 -13.908 34.401 0.289 1.00 37.22 C
ATOM 8 O4' A A 30 -12.653 35.059 -0.023 1.00 33.47 O
ATOM 9 C3' A A 30 -13.546 33.182 1.134 1.00 34.02 C
ATOM 10 O3' A A 30 -13.877 31.980 0.448 1.00 41.85 O
ATOM 11 C2' A A 30 -12.042 33.307 1.358 1.00 37.40 C
ATOM 12 O2' A A 30 -11.390 32.050 1.388 1.00 43.32 O
ATOM 13 C1' A A 30 -11.634 34.096 0.123 1.00 36.78 C
ATOM 14 N9 A A 30 -10.338 34.753 0.254 1.00 34.45 N
ATOM 15 C8 A A 30 -9.715 35.122 1.411 1.00 33.89 C
ATOM 16 N7 A A 30 -8.547 35.689 1.223 1.00 35.69 N
ATOM 17 C5 A A 30 -8.395 35.694 -0.155 1.00 35.51 C
ATOM 18 C6 A A 30 -7.364 36.158 -0.998 1.00 32.06 C
ATOM 19 N6 A A 30 -6.245 36.734 -0.549 1.00 30.81 N
ATOM 20 N1 A A 30 -7.530 36.004 -2.329 1.00 31.52 N
ATOM 21 C2 A A 30 -8.650 35.424 -2.777 1.00 34.69 C
ATOM 22 N3 A A 30 -9.684 34.949 -2.084 1.00 33.39 N
ATOM 23 C4 A A 30 -9.491 35.116 -0.767 1.00 33.45 C
ATOM 24 P A A 31 -15.213 31.193 0.842 1.00 46.67 P
ATOM 25 OP1 A A 31 -15.294 31.172 2.320 1.00 41.91 O
ATOM 26 OP2 A A 31 -15.233 29.923 0.084 1.00 47.71 O
ATOM 27 O5' A A 31 -16.382 32.147 0.306 1.00 43.64 O
TER
ATOM 1 O3' G B 59 -1.738 38.632 -3.143 1.00 30.34 O
ATOM 2 P C B 60 -2.508 37.597 -2.204 1.00 31.51 P
ATOM 3 OP1 C B 60 -2.320 36.244 -2.773 1.00 35.57 O
ATOM 4 OP2 C B 60 -3.871 38.131 -1.995 1.00 28.46 O
ATOM 5 O5' C B 60 -1.684 37.664 -0.832 1.00 32.43 O
ATOM 6 C5' C B 60 -2.253 38.260 0.330 1.00 32.57 C
ATOM 7 C4' C B 60 -1.212 39.056 1.097 1.00 32.40 C
ATOM 8 O4' C B 60 -0.038 38.242 1.341 1.00 32.16 O
ATOM 9 C3' C B 60 -0.684 40.267 0.345 1.00 30.27 C
ATOM 10 O3' C B 60 -1.544 41.374 0.550 1.00 31.35 O
ATOM 11 C2' C B 60 0.674 40.475 1.003 1.00 34.03 C
ATOM 12 O2' C B 60 0.583 41.149 2.244 1.00 37.00 O
ATOM 13 C1' C B 60 1.130 39.034 1.208 1.00 34.15 C
ATOM 14 N1 C B 60 1.937 38.525 0.067 1.00 33.64 N
ATOM 15 C2 C B 60 3.228 39.027 -0.127 1.00 36.22 C
ATOM 16 O2 C B 60 3.667 39.878 0.657 1.00 36.20 O
ATOM 17 N3 C B 60 3.962 38.564 -1.167 1.00 31.60 N
ATOM 18 C4 C B 60 3.451 37.646 -1.990 1.00 32.33 C
ATOM 19 N4 C B 60 4.217 37.225 -3.001 1.00 29.84 N
ATOM 20 C5 C B 60 2.136 37.124 -1.811 1.00 28.51 C
ATOM 21 C6 C B 60 1.420 37.588 -0.780 1.00 32.93 C
ATOM 22 P C B 61 -1.642 42.523 -0.561 1.00 31.40 P
ATOM 23 OP1 C B 61 -2.712 43.446 -0.134 1.00 29.04 O
ATOM 24 OP2 C B 61 -1.702 41.894 -1.898 1.00 32.27 O
ATOM 25 O5' C B 61 -0.241 43.277 -0.431 1.00 35.04 O
TER
Atoms:
OP1: (-16.142,35.511,3.667)
OP2: (-14.154,36.957,4.414)
C3': (-13.546,33.182,1.134)
C1': (-11.634,34.096,0.123)
C5': (-14.828,35.381,0.989)
O4': (-12.653,35.059,-0.023)
C8: (-9.715,35.122,1.411)
O2': (-11.390,32.050,1.388)
C6: (-7.364,36.158,-0.998)
C5: (-8.395,35.694,-0.155)
C4: (-9.491,35.116,-0.767)
P: (-15.066,36.476,3.352)
C4': (-13.908,34.401,0.289)
C2': (-12.042,33.307,1.358)
C2: (-8.650,35.424,-2.777)
N1: (-7.530,36.004,-2.329)
N3: (-9.684,34.949,-2.084)
N6: (-6.245,36.734,-0.549)
N7: (-8.547,35.689,1.223)
N9: (-10.338,34.753,0.254)
O5': (-14.193,35.853,2.168)
O3': (-13.877,31.980,0.448)
OP2: (-14.154,36.957,4.414)
C3': (-13.546,33.182,1.134)
C1': (-11.634,34.096,0.123)
C5': (-14.828,35.381,0.989)
O4': (-12.653,35.059,-0.023)
C8: (-9.715,35.122,1.411)
O2': (-11.390,32.050,1.388)
C6: (-7.364,36.158,-0.998)
C5: (-8.395,35.694,-0.155)
C4: (-9.491,35.116,-0.767)
P: (-15.066,36.476,3.352)
C4': (-13.908,34.401,0.289)
C2': (-12.042,33.307,1.358)
C2: (-8.650,35.424,-2.777)
N1: (-7.530,36.004,-2.329)
N3: (-9.684,34.949,-2.084)
N6: (-6.245,36.734,-0.549)
N7: (-8.547,35.689,1.223)
N9: (-10.338,34.753,0.254)
O5': (-14.193,35.853,2.168)
O3': (-13.877,31.980,0.448)
C2: (3.228,39.027,-0.127)
OP1: (-2.320,36.244,-2.773)
OP2: (-3.871,38.131,-1.995)
C4: (3.451,37.646,-1.990)
O5': (-1.684,37.664,-0.832)
C3': (-0.684,40.267,0.345)
C1': (1.130,39.034,1.208)
O4': (-0.038,38.242,1.341)
C5': (-2.253,38.260,0.330)
P: (-2.508,37.597,-2.204)
O2: (3.667,39.878,0.657)
C4': (-1.212,39.056,1.097)
C2': (0.674,40.475,1.003)
O2': (0.583,41.149,2.244)
N1: (1.937,38.525,0.067)
N3: (3.962,38.564,-1.167)
N4: (4.217,37.225,-3.001)
C6: (1.420,37.588,-0.780)
C5: (2.136,37.124,-1.811)
O3': (-1.544,41.374,0.550)
OP1: (-2.320,36.244,-2.773)
OP2: (-3.871,38.131,-1.995)
C4: (3.451,37.646,-1.990)
O5': (-1.684,37.664,-0.832)
C3': (-0.684,40.267,0.345)
C1': (1.130,39.034,1.208)
O4': (-0.038,38.242,1.341)
C5': (-2.253,38.260,0.330)
P: (-2.508,37.597,-2.204)
O2: (3.667,39.878,0.657)
C4': (-1.212,39.056,1.097)
C2': (0.674,40.475,1.003)
O2': (0.583,41.149,2.244)
N1: (1.937,38.525,0.067)
N3: (3.962,38.564,-1.167)
N4: (4.217,37.225,-3.001)
C6: (1.420,37.588,-0.780)
C5: (2.136,37.124,-1.811)
O3': (-1.544,41.374,0.550)
Image (generated by PyMOL):