Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0682:0719
Extra
PDB:
ATOM 1 O3' A A 681 66.584 72.750 39.805 1.00 46.22 O
ATOM 2 P A A 682 65.567 72.176 38.697 1.00 47.72 P
ATOM 3 OP1 A A 682 65.684 73.065 37.520 1.00 48.79 O
ATOM 4 OP2 A A 682 64.237 71.966 39.319 1.00 46.39 O
ATOM 5 O5' A A 682 66.201 70.771 38.290 1.00 47.80 O
ATOM 6 C5' A A 682 67.455 70.716 37.577 1.00 48.57 C
ATOM 7 C4' A A 682 67.940 69.291 37.459 1.00 50.47 C
ATOM 8 O4' A A 682 68.202 68.766 38.786 1.00 51.91 O
ATOM 9 C3' A A 682 66.967 68.295 36.845 1.00 50.78 C
ATOM 10 O3' A A 682 67.021 68.300 35.423 1.00 51.07 O
ATOM 11 C2' A A 682 67.476 66.979 37.406 1.00 51.01 C
ATOM 12 O2' A A 682 68.619 66.512 36.716 1.00 50.77 O
ATOM 13 C1' A A 682 67.854 67.393 38.831 1.00 51.32 C
ATOM 14 N9 A A 682 66.725 67.252 39.745 1.00 50.92 N
ATOM 15 C8 A A 682 65.697 68.139 39.950 1.00 50.95 C
ATOM 16 N7 A A 682 64.805 67.723 40.812 1.00 51.78 N
ATOM 17 C5 A A 682 65.279 66.481 41.209 1.00 51.23 C
ATOM 18 C6 A A 682 64.779 65.523 42.107 1.00 51.26 C
ATOM 19 N6 A A 682 63.637 65.667 42.786 1.00 50.57 N
ATOM 20 N1 A A 682 65.500 64.394 42.281 1.00 50.28 N
ATOM 21 C2 A A 682 66.639 64.247 41.587 1.00 50.24 C
ATOM 22 N3 A A 682 67.206 65.071 40.711 1.00 49.42 N
ATOM 23 C4 A A 682 66.467 66.183 40.566 1.00 50.83 C
ATOM 24 P C A 683 65.660 68.282 34.563 1.00 51.39 P
ATOM 25 OP1 C A 683 66.062 67.839 33.207 1.00 52.30 O
ATOM 26 OP2 C A 683 64.944 69.572 34.727 1.00 50.90 O
ATOM 27 O5' C A 683 64.754 67.158 35.241 1.00 51.35 O
TER
ATOM 1 O3' U B 718 59.203 63.561 43.895 1.00 41.70 O
ATOM 2 P C B 719 60.591 62.851 44.288 1.00 44.41 P
ATOM 3 OP1 C B 719 61.624 63.292 43.321 1.00 46.72 O
ATOM 4 OP2 C B 719 60.352 61.407 44.485 1.00 45.87 O
ATOM 5 O5' C B 719 60.952 63.475 45.705 1.00 45.98 O
ATOM 6 C5' C B 719 61.385 64.844 45.829 1.00 45.52 C
ATOM 7 C4' C B 719 61.826 65.118 47.243 1.00 44.44 C
ATOM 8 O4' C B 719 60.687 65.105 48.140 1.00 44.82 O
ATOM 9 C3' C B 719 62.759 64.072 47.814 1.00 44.29 C
ATOM 10 O3' C B 719 64.080 64.308 47.379 1.00 46.12 O
ATOM 11 C2' C B 719 62.570 64.251 49.313 1.00 45.31 C
ATOM 12 O2' C B 719 63.262 65.370 49.823 1.00 44.58 O
ATOM 13 C1' C B 719 61.073 64.549 49.388 1.00 46.10 C
ATOM 14 N1 C B 719 60.225 63.373 49.673 1.00 46.68 N
ATOM 15 C2 C B 719 59.875 63.102 51.000 1.00 46.76 C
ATOM 16 O2 C B 719 60.308 63.829 51.899 1.00 48.07 O
ATOM 17 N3 C B 719 59.075 62.056 51.272 1.00 47.57 N
ATOM 18 C4 C B 719 58.630 61.286 50.285 1.00 48.04 C
ATOM 19 N4 C B 719 57.835 60.267 50.608 1.00 49.64 N
ATOM 20 C5 C B 719 58.979 61.524 48.925 1.00 48.24 C
ATOM 21 C6 C B 719 59.773 62.567 48.667 1.00 46.90 C
ATOM 22 P U B 720 65.142 63.115 47.402 1.00 48.23 P
ATOM 23 OP1 U B 720 66.459 63.666 47.006 1.00 49.39 O
ATOM 24 OP2 U B 720 64.569 61.978 46.648 1.00 50.53 O
ATOM 25 O5' U B 720 65.222 62.737 48.942 1.00 49.09 O
TER
ATOM 2 P A A 682 65.567 72.176 38.697 1.00 47.72 P
ATOM 3 OP1 A A 682 65.684 73.065 37.520 1.00 48.79 O
ATOM 4 OP2 A A 682 64.237 71.966 39.319 1.00 46.39 O
ATOM 5 O5' A A 682 66.201 70.771 38.290 1.00 47.80 O
ATOM 6 C5' A A 682 67.455 70.716 37.577 1.00 48.57 C
ATOM 7 C4' A A 682 67.940 69.291 37.459 1.00 50.47 C
ATOM 8 O4' A A 682 68.202 68.766 38.786 1.00 51.91 O
ATOM 9 C3' A A 682 66.967 68.295 36.845 1.00 50.78 C
ATOM 10 O3' A A 682 67.021 68.300 35.423 1.00 51.07 O
ATOM 11 C2' A A 682 67.476 66.979 37.406 1.00 51.01 C
ATOM 12 O2' A A 682 68.619 66.512 36.716 1.00 50.77 O
ATOM 13 C1' A A 682 67.854 67.393 38.831 1.00 51.32 C
ATOM 14 N9 A A 682 66.725 67.252 39.745 1.00 50.92 N
ATOM 15 C8 A A 682 65.697 68.139 39.950 1.00 50.95 C
ATOM 16 N7 A A 682 64.805 67.723 40.812 1.00 51.78 N
ATOM 17 C5 A A 682 65.279 66.481 41.209 1.00 51.23 C
ATOM 18 C6 A A 682 64.779 65.523 42.107 1.00 51.26 C
ATOM 19 N6 A A 682 63.637 65.667 42.786 1.00 50.57 N
ATOM 20 N1 A A 682 65.500 64.394 42.281 1.00 50.28 N
ATOM 21 C2 A A 682 66.639 64.247 41.587 1.00 50.24 C
ATOM 22 N3 A A 682 67.206 65.071 40.711 1.00 49.42 N
ATOM 23 C4 A A 682 66.467 66.183 40.566 1.00 50.83 C
ATOM 24 P C A 683 65.660 68.282 34.563 1.00 51.39 P
ATOM 25 OP1 C A 683 66.062 67.839 33.207 1.00 52.30 O
ATOM 26 OP2 C A 683 64.944 69.572 34.727 1.00 50.90 O
ATOM 27 O5' C A 683 64.754 67.158 35.241 1.00 51.35 O
TER
ATOM 1 O3' U B 718 59.203 63.561 43.895 1.00 41.70 O
ATOM 2 P C B 719 60.591 62.851 44.288 1.00 44.41 P
ATOM 3 OP1 C B 719 61.624 63.292 43.321 1.00 46.72 O
ATOM 4 OP2 C B 719 60.352 61.407 44.485 1.00 45.87 O
ATOM 5 O5' C B 719 60.952 63.475 45.705 1.00 45.98 O
ATOM 6 C5' C B 719 61.385 64.844 45.829 1.00 45.52 C
ATOM 7 C4' C B 719 61.826 65.118 47.243 1.00 44.44 C
ATOM 8 O4' C B 719 60.687 65.105 48.140 1.00 44.82 O
ATOM 9 C3' C B 719 62.759 64.072 47.814 1.00 44.29 C
ATOM 10 O3' C B 719 64.080 64.308 47.379 1.00 46.12 O
ATOM 11 C2' C B 719 62.570 64.251 49.313 1.00 45.31 C
ATOM 12 O2' C B 719 63.262 65.370 49.823 1.00 44.58 O
ATOM 13 C1' C B 719 61.073 64.549 49.388 1.00 46.10 C
ATOM 14 N1 C B 719 60.225 63.373 49.673 1.00 46.68 N
ATOM 15 C2 C B 719 59.875 63.102 51.000 1.00 46.76 C
ATOM 16 O2 C B 719 60.308 63.829 51.899 1.00 48.07 O
ATOM 17 N3 C B 719 59.075 62.056 51.272 1.00 47.57 N
ATOM 18 C4 C B 719 58.630 61.286 50.285 1.00 48.04 C
ATOM 19 N4 C B 719 57.835 60.267 50.608 1.00 49.64 N
ATOM 20 C5 C B 719 58.979 61.524 48.925 1.00 48.24 C
ATOM 21 C6 C B 719 59.773 62.567 48.667 1.00 46.90 C
ATOM 22 P U B 720 65.142 63.115 47.402 1.00 48.23 P
ATOM 23 OP1 U B 720 66.459 63.666 47.006 1.00 49.39 O
ATOM 24 OP2 U B 720 64.569 61.978 46.648 1.00 50.53 O
ATOM 25 O5' U B 720 65.222 62.737 48.942 1.00 49.09 O
TER
Atoms:
OP1: (65.684,73.065,37.520)
OP2: (64.237,71.966,39.319)
C3': (66.967,68.295,36.845)
C1': (67.854,67.393,38.831)
C5': (67.455,70.716,37.577)
O4': (68.202,68.766,38.786)
C8: (65.697,68.139,39.950)
O2': (68.619,66.512,36.716)
C6: (64.779,65.523,42.107)
C5: (65.279,66.481,41.209)
C4: (66.467,66.183,40.566)
P: (65.567,72.176,38.697)
C4': (67.940,69.291,37.459)
C2': (67.476,66.979,37.406)
C2: (66.639,64.247,41.587)
N1: (65.500,64.394,42.281)
N3: (67.206,65.071,40.711)
N6: (63.637,65.667,42.786)
N7: (64.805,67.723,40.812)
N9: (66.725,67.252,39.745)
O5': (66.201,70.771,38.290)
O3': (67.021,68.300,35.423)
OP2: (64.237,71.966,39.319)
C3': (66.967,68.295,36.845)
C1': (67.854,67.393,38.831)
C5': (67.455,70.716,37.577)
O4': (68.202,68.766,38.786)
C8: (65.697,68.139,39.950)
O2': (68.619,66.512,36.716)
C6: (64.779,65.523,42.107)
C5: (65.279,66.481,41.209)
C4: (66.467,66.183,40.566)
P: (65.567,72.176,38.697)
C4': (67.940,69.291,37.459)
C2': (67.476,66.979,37.406)
C2: (66.639,64.247,41.587)
N1: (65.500,64.394,42.281)
N3: (67.206,65.071,40.711)
N6: (63.637,65.667,42.786)
N7: (64.805,67.723,40.812)
N9: (66.725,67.252,39.745)
O5': (66.201,70.771,38.290)
O3': (67.021,68.300,35.423)
C2: (59.875,63.102,51.000)
OP1: (61.624,63.292,43.321)
OP2: (60.352,61.407,44.485)
C4: (58.630,61.286,50.285)
O5': (60.952,63.475,45.705)
C3': (62.759,64.072,47.814)
C1': (61.073,64.549,49.388)
O4': (60.687,65.105,48.140)
C5': (61.385,64.844,45.829)
P: (60.591,62.851,44.288)
O2: (60.308,63.829,51.899)
C4': (61.826,65.118,47.243)
C2': (62.570,64.251,49.313)
O2': (63.262,65.370,49.823)
N1: (60.225,63.373,49.673)
N3: (59.075,62.056,51.272)
N4: (57.835,60.267,50.608)
C6: (59.773,62.567,48.667)
C5: (58.979,61.524,48.925)
O3': (64.080,64.308,47.379)
OP1: (61.624,63.292,43.321)
OP2: (60.352,61.407,44.485)
C4: (58.630,61.286,50.285)
O5': (60.952,63.475,45.705)
C3': (62.759,64.072,47.814)
C1': (61.073,64.549,49.388)
O4': (60.687,65.105,48.140)
C5': (61.385,64.844,45.829)
P: (60.591,62.851,44.288)
O2: (60.308,63.829,51.899)
C4': (61.826,65.118,47.243)
C2': (62.570,64.251,49.313)
O2': (63.262,65.370,49.823)
N1: (60.225,63.373,49.673)
N3: (59.075,62.056,51.272)
N4: (57.835,60.267,50.608)
C6: (59.773,62.567,48.667)
C5: (58.979,61.524,48.925)
O3': (64.080,64.308,47.379)
Image (generated by PyMOL):