ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3LWQ:D23:D24

Extra

PDB:
ATOM 1 O3' U A 22 56.072 -11.721 42.564 1.00 68.54 O
ATOM 2 P G A 23 57.457 -11.676 41.772 1.00 99.87 P
ATOM 3 OP1 G A 23 58.276 -12.835 42.200 1.00107.26 O
ATOM 4 OP2 G A 23 57.996 -10.300 41.849 1.00101.07 O
ATOM 5 O5' G A 23 57.051 -12.010 40.264 1.00 84.96 O
ATOM 6 C5' G A 23 56.907 -13.320 39.734 1.00 84.58 C
ATOM 7 C4' G A 23 56.794 -13.223 38.235 1.00 82.41 C
ATOM 8 O4' G A 23 55.640 -12.404 37.927 1.00 78.89 O
ATOM 9 C3' G A 23 57.971 -12.524 37.565 1.00 90.03 C
ATOM 10 O3' G A 23 59.034 -13.424 37.240 1.00103.50 O
ATOM 11 C2' G A 23 57.365 -11.733 36.407 1.00 90.85 C
ATOM 12 O2' G A 23 57.389 -12.465 35.194 1.00110.94 O
ATOM 13 C1' G A 23 55.903 -11.556 36.833 1.00 82.58 C
ATOM 14 N9 G A 23 55.573 -10.169 37.207 1.00 81.38 N
ATOM 15 C8 G A 23 56.096 -9.442 38.251 1.00 81.31 C
ATOM 16 N7 G A 23 55.619 -8.231 38.330 1.00 81.03 N
ATOM 17 C5 G A 23 54.723 -8.150 37.271 1.00 78.34 C
ATOM 18 C6 G A 23 53.904 -7.071 36.862 1.00 84.17 C
ATOM 19 O6 G A 23 53.830 -5.956 37.394 1.00 98.08 O
ATOM 20 N1 G A 23 53.129 -7.383 35.737 1.00 74.14 N
ATOM 21 C2 G A 23 53.155 -8.612 35.105 1.00 72.10 C
ATOM 22 N2 G A 23 52.343 -8.760 34.047 1.00 68.46 N
ATOM 23 N3 G A 23 53.931 -9.631 35.481 1.00 67.63 N
ATOM 24 C4 G A 23 54.682 -9.333 36.569 1.00 74.34 C
ATOM 25 P A A 24 59.355 -14.218 35.866 1.00110.75 P
ATOM 26 OP1 A A 24 60.166 -15.399 36.238 1.00117.22 O
ATOM 27 OP2 A A 24 59.865 -13.272 34.849 1.00115.21 O
ATOM 28 O5' A A 24 57.981 -14.838 35.324 1.00 80.06 O
TER

ATOM 1 O3' G B 23 59.034 -13.424 37.240 1.00103.50 O
ATOM 2 P A B 24 59.355 -14.218 35.866 1.00110.75 P
ATOM 3 OP1 A B 24 60.166 -15.399 36.238 1.00117.22 O
ATOM 4 OP2 A B 24 59.865 -13.272 34.849 1.00115.21 O
ATOM 5 O5' A B 24 57.981 -14.838 35.324 1.00 80.06 O
ATOM 6 C5' A B 24 57.483 -16.081 35.816 1.00 91.65 C
ATOM 7 C4' A B 24 56.663 -16.808 34.776 1.00 98.81 C
ATOM 8 O4' A B 24 55.692 -15.891 34.198 1.00 98.81 O
ATOM 9 C3' A B 24 57.451 -17.378 33.597 1.00108.83 C
ATOM 10 O3' A B 24 56.770 -18.537 33.107 1.00124.10 O
ATOM 11 C2' A B 24 57.338 -16.253 32.574 1.00 97.93 C
ATOM 12 O2' A B 24 57.595 -16.609 31.229 1.00 85.73 O
ATOM 13 C1' A B 24 55.893 -15.814 32.797 1.00 98.73 C
ATOM 14 N9 A B 24 55.626 -14.446 32.346 1.00 94.51 N
ATOM 15 C8 A B 24 55.932 -13.289 33.001 1.00 94.06 C
ATOM 16 N7 A B 24 55.596 -12.200 32.355 1.00 94.58 N
ATOM 17 C5 A B 24 55.037 -12.677 31.186 1.00 99.50 C
ATOM 18 C6 A B 24 54.483 -12.019 30.075 1.00 98.66 C
ATOM 19 N6 A B 24 54.405 -10.690 29.984 1.00100.63 N
ATOM 20 N1 A B 24 54.011 -12.780 29.069 1.00 95.83 N
ATOM 21 C2 A B 24 54.092 -14.109 29.185 1.00103.06 C
ATOM 22 N3 A B 24 54.588 -14.844 30.180 1.00106.95 N
ATOM 23 C4 A B 24 55.048 -14.057 31.162 1.00100.53 C
ATOM 24 P U B 25 57.472 -19.955 32.842 1.00119.69 P
ATOM 25 OP1 U B 25 56.389 -20.924 32.546 1.00113.65 O
ATOM 26 OP2 U B 25 58.487 -20.214 33.892 1.00115.37 O
ATOM 27 O5' U B 25 58.195 -19.754 31.432 1.00150.13 O
TER

Atoms:
OP1: (58.276,-12.835,42.200)
OP2: (57.996,-10.300,41.849)
C3': (57.971,-12.524,37.565)
C1': (55.903,-11.556,36.833)
C5': (56.907,-13.320,39.734)
O6: (53.830,-5.956,37.394)
O4': (55.640,-12.404,37.927)
C8: (56.096,-9.442,38.251)
C2: (53.155,-8.612,35.105)
C6: (53.904,-7.071,36.862)
C5: (54.723,-8.150,37.271)
C4: (54.682,-9.333,36.569)
P: (57.457,-11.676,41.772)
C4': (56.794,-13.223,38.235)
C2': (57.365,-11.733,36.407)
O2': (57.389,-12.465,35.194)
N1: (53.129,-7.383,35.737)
N2: (52.343,-8.760,34.047)
N3: (53.931,-9.631,35.481)
N7: (55.619,-8.231,38.330)
N9: (55.573,-10.169,37.207)
O5': (57.051,-12.010,40.264)
O3': (59.034,-13.424,37.240)
OP1: (60.166,-15.399,36.238)
OP2: (59.865,-13.272,34.849)
C3': (57.451,-17.378,33.597)
C1': (55.893,-15.814,32.797)
C5': (57.483,-16.081,35.816)
O4': (55.692,-15.891,34.198)
C8: (55.932,-13.289,33.001)
O2': (57.595,-16.609,31.229)
C6: (54.483,-12.019,30.075)
C5: (55.037,-12.677,31.186)
C4: (55.048,-14.057,31.162)
P: (59.355,-14.218,35.866)
C4': (56.663,-16.808,34.776)
C2': (57.338,-16.253,32.574)
C2: (54.092,-14.109,29.185)
N1: (54.011,-12.780,29.069)
N3: (54.588,-14.844,30.180)
N6: (54.405,-10.690,29.984)
N7: (55.596,-12.200,32.355)
N9: (55.626,-14.446,32.346)
O5': (57.981,-14.838,35.324)
O3': (56.770,-18.537,33.107)
Image (generated by PyMOL):
PyMOL image
show in jmol