ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A1854:A1855

Extra

PDB:
ATOM 1 O3' A A1853 -78.637 -23.630 -3.657 1.00 34.94 O
ATOM 2 P A A1854 -77.189 -22.912 -3.490 1.00 17.42 P
ATOM 3 OP1 A A1854 -77.273 -21.546 -2.945 1.00 24.62 O
ATOM 4 OP2 A A1854 -76.482 -23.115 -4.791 1.00 24.62 O
ATOM 5 O5' A A1854 -76.471 -23.849 -2.412 1.00 25.51 O
ATOM 6 C5' A A1854 -77.025 -23.997 -1.090 1.00 25.51 C
ATOM 7 C4' A A1854 -77.240 -25.454 -0.744 1.00 25.51 C
ATOM 8 O4' A A1854 -75.980 -26.042 -0.299 1.00 25.51 O
ATOM 9 C3' A A1854 -78.228 -25.636 0.410 1.00 25.51 C
ATOM 10 O3' A A1854 -79.100 -26.725 0.201 1.00 25.51 O
ATOM 11 C2' A A1854 -77.342 -25.889 1.617 1.00 25.51 C
ATOM 12 O2' A A1854 -77.973 -26.667 2.619 1.00 25.51 O
ATOM 13 C1' A A1854 -76.156 -26.611 0.986 1.00 25.51 C
ATOM 14 N9 A A1854 -74.957 -26.408 1.789 1.00 34.84 N
ATOM 15 C8 A A1854 -74.307 -25.241 2.073 1.00 34.84 C
ATOM 16 N7 A A1854 -73.296 -25.386 2.891 1.00 34.84 N
ATOM 17 C5 A A1854 -73.271 -26.747 3.149 1.00 34.84 C
ATOM 18 C6 A A1854 -72.439 -27.544 3.953 1.00 34.84 C
ATOM 19 N6 A A1854 -71.436 -27.069 4.691 1.00 34.84 N
ATOM 20 N1 A A1854 -72.678 -28.864 3.981 1.00 34.84 N
ATOM 21 C2 A A1854 -73.692 -29.340 3.258 1.00 34.84 C
ATOM 22 N3 A A1854 -74.546 -28.696 2.475 1.00 34.84 N
ATOM 23 C4 A A1854 -74.277 -27.388 2.463 1.00 34.84 C
ATOM 24 P U A1855 -80.544 -26.433 -0.390 1.00 13.29 P
ATOM 25 OP1 U A1855 -81.293 -27.681 -0.526 1.00 20.13 O
ATOM 26 OP2 U A1855 -80.308 -25.592 -1.586 1.00 20.13 O
ATOM 27 O5' U A1855 -81.271 -25.535 0.709 1.00 1.31 O
TER

ATOM 1 O3' A B1854 -79.100 -26.725 0.201 1.00 25.51 O
ATOM 2 P U B1855 -80.544 -26.433 -0.390 1.00 13.29 P
ATOM 3 OP1 U B1855 -81.293 -27.681 -0.526 1.00 20.13 O
ATOM 4 OP2 U B1855 -80.308 -25.592 -1.586 1.00 20.13 O
ATOM 5 O5' U B1855 -81.271 -25.535 0.709 1.00 1.31 O
ATOM 6 C5' U B1855 -81.842 -26.123 1.889 1.00 1.31 C
ATOM 7 C4' U B1855 -82.921 -25.237 2.479 1.00 1.31 C
ATOM 8 O4' U B1855 -82.327 -24.029 3.013 1.00 1.31 O
ATOM 9 C3' U B1855 -84.064 -24.804 1.570 1.00 1.31 C
ATOM 10 O3' U B1855 -85.294 -24.878 2.273 1.00 1.31 O
ATOM 11 C2' U B1855 -83.757 -23.339 1.287 1.00 1.31 C
ATOM 12 O2' U B1855 -84.918 -22.557 1.173 1.00 1.31 O
ATOM 13 C1' U B1855 -83.048 -22.908 2.561 1.00 1.31 C
ATOM 14 N1 U B1855 -82.117 -21.800 2.302 1.00 13.59 N
ATOM 15 C2 U B1855 -82.511 -20.529 2.658 1.00 13.59 C
ATOM 16 O2 U B1855 -83.576 -20.290 3.190 1.00 13.59 O
ATOM 17 N3 U B1855 -81.614 -19.543 2.367 1.00 13.59 N
ATOM 18 C4 U B1855 -80.390 -19.692 1.773 1.00 13.59 C
ATOM 19 O4 U B1855 -79.677 -18.711 1.594 1.00 13.59 O
ATOM 20 C5 U B1855 -80.053 -21.025 1.438 1.00 13.59 C
ATOM 21 C6 U B1855 -80.905 -22.012 1.709 1.00 13.59 C
ATOM 22 P U B1856 -86.227 -26.166 2.097 1.00 3.80 P
ATOM 23 OP1 U B1856 -87.354 -26.031 3.036 1.00 3.80 O
ATOM 24 OP2 U B1856 -85.323 -27.338 2.195 1.00 3.80 O
ATOM 25 O5' U B1856 -86.813 -26.084 0.616 1.00 10.44 O
TER

Atoms:
OP1: (-77.273,-21.546,-2.945)
OP2: (-76.482,-23.115,-4.791)
C3': (-78.228,-25.636,0.410)
C1': (-76.156,-26.611,0.986)
C5': (-77.025,-23.997,-1.090)
O4': (-75.980,-26.042,-0.299)
C8: (-74.307,-25.241,2.073)
O2': (-77.973,-26.667,2.619)
C6: (-72.439,-27.544,3.953)
C5: (-73.271,-26.747,3.149)
C4: (-74.277,-27.388,2.463)
P: (-77.189,-22.912,-3.490)
C4': (-77.240,-25.454,-0.744)
C2': (-77.342,-25.889,1.617)
C2: (-73.692,-29.340,3.258)
N1: (-72.678,-28.864,3.981)
N3: (-74.546,-28.696,2.475)
N6: (-71.436,-27.069,4.691)
N7: (-73.296,-25.386,2.891)
N9: (-74.957,-26.408,1.789)
O5': (-76.471,-23.849,-2.412)
O3': (-79.100,-26.725,0.201)
C4: (-80.390,-19.692,1.773)
N3: (-81.614,-19.543,2.367)
OP1: (-81.293,-27.681,-0.526)
OP2: (-80.308,-25.592,-1.586)
C2: (-82.511,-20.529,2.658)
C1': (-83.048,-22.908,2.561)
C3': (-84.064,-24.804,1.570)
O5': (-81.271,-25.535,0.709)
O4': (-82.327,-24.029,3.013)
C5': (-81.842,-26.123,1.889)
P: (-80.544,-26.433,-0.390)
C4': (-82.921,-25.237,2.479)
C2': (-83.757,-23.339,1.287)
O2': (-84.918,-22.557,1.173)
N1: (-82.117,-21.800,2.302)
O4: (-79.677,-18.711,1.594)
O2: (-83.576,-20.290,3.190)
C6: (-80.905,-22.012,1.709)
C5: (-80.053,-21.025,1.438)
O3': (-85.294,-24.878,2.273)
Image (generated by PyMOL):
PyMOL image
show in jmol