Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1082:A1197
Extra
PDB:
ATOM 1 O3' U A1081 31.795 103.324 124.725 1.00 39.17 O
ATOM 2 P A A1082 32.348 104.044 123.416 1.00 39.65 P
ATOM 3 OP1 A A1082 32.247 105.521 123.573 1.00 39.40 O
ATOM 4 OP2 A A1082 31.707 103.377 122.263 1.00 39.59 O
ATOM 5 O5' A A1082 33.879 103.659 123.462 1.00 39.08 O
ATOM 6 C5' A A1082 34.274 102.295 123.468 1.00 40.43 C
ATOM 7 C4' A A1082 35.328 102.089 122.429 1.00 42.69 C
ATOM 8 O4' A A1082 36.352 103.095 122.601 1.00 42.44 O
ATOM 9 C3' A A1082 36.030 100.746 122.439 1.00 42.82 C
ATOM 10 O3' A A1082 36.364 100.462 121.092 1.00 44.15 O
ATOM 11 C2' A A1082 37.300 101.055 123.219 1.00 41.99 C
ATOM 12 O2' A A1082 38.360 100.198 122.875 1.00 43.83 O
ATOM 13 C1' A A1082 37.607 102.467 122.728 1.00 42.05 C
ATOM 14 N9 A A1082 38.451 103.301 123.596 1.00 40.89 N
ATOM 15 C8 A A1082 38.795 103.124 124.910 1.00 39.29 C
ATOM 16 N7 A A1082 39.544 104.080 125.391 1.00 38.94 N
ATOM 17 C5 A A1082 39.713 104.946 124.323 1.00 38.44 C
ATOM 18 C6 A A1082 40.405 106.163 124.187 1.00 38.89 C
ATOM 19 N6 A A1082 41.071 106.754 125.184 1.00 38.32 N
ATOM 20 N1 A A1082 40.385 106.768 122.974 1.00 38.66 N
ATOM 21 C2 A A1082 39.698 106.187 121.981 1.00 38.32 C
ATOM 22 N3 A A1082 39.002 105.056 121.993 1.00 38.46 N
ATOM 23 C4 A A1082 39.054 104.476 123.207 1.00 39.51 C
ATOM 24 P A A1083 35.274 99.795 120.122 1.00 45.42 P
ATOM 25 OP1 A A1083 35.758 100.128 118.767 1.00 46.38 O
ATOM 26 OP2 A A1083 33.887 100.180 120.522 1.00 46.31 O
ATOM 27 O5' A A1083 35.438 98.236 120.398 1.00 43.48 O
TER
ATOM 1 O3' U B1196 39.431 111.692 126.791 1.00 39.77 O
ATOM 2 P C B1197 39.614 110.160 126.387 1.00 37.67 P
ATOM 3 OP1 C B1197 39.183 109.319 127.534 1.00 39.27 O
ATOM 4 OP2 C B1197 40.975 109.994 125.844 1.00 36.34 O
ATOM 5 O5' C B1197 38.560 109.987 125.201 1.00 38.83 O
ATOM 6 C5' C B1197 38.510 108.768 124.433 1.00 40.36 C
ATOM 7 C4' C B1197 37.107 108.179 124.423 1.00 41.07 C
ATOM 8 O4' C B1197 36.329 108.672 125.551 1.00 40.19 O
ATOM 9 C3' C B1197 36.213 108.570 123.254 1.00 40.04 C
ATOM 10 O3' C B1197 36.493 107.877 122.038 1.00 39.75 O
ATOM 11 C2' C B1197 34.826 108.188 123.766 1.00 39.96 C
ATOM 12 O2' C B1197 34.464 106.829 123.609 1.00 39.22 O
ATOM 13 C1' C B1197 34.948 108.517 125.251 1.00 39.49 C
ATOM 14 N1 C B1197 34.192 109.734 125.610 1.00 38.38 N
ATOM 15 C2 C B1197 32.808 109.598 125.806 1.00 37.43 C
ATOM 16 O2 C B1197 32.283 108.485 125.644 1.00 35.92 O
ATOM 17 N3 C B1197 32.078 110.678 126.155 1.00 37.83 N
ATOM 18 C4 C B1197 32.669 111.862 126.297 1.00 37.50 C
ATOM 19 N4 C B1197 31.899 112.888 126.663 1.00 37.81 N
ATOM 20 C5 C B1197 34.073 112.041 126.080 1.00 35.07 C
ATOM 21 C6 C B1197 34.790 110.960 125.747 1.00 36.41 C
ATOM 22 P G B1198 37.116 108.677 120.800 1.00 37.84 P
ATOM 23 OP1 G B1198 37.033 107.791 119.625 1.00 39.37 O
ATOM 24 OP2 G B1198 38.432 109.195 121.242 1.00 37.95 O
ATOM 25 O5' G B1198 36.124 109.897 120.556 1.00 37.63 O
TER
ATOM 2 P A A1082 32.348 104.044 123.416 1.00 39.65 P
ATOM 3 OP1 A A1082 32.247 105.521 123.573 1.00 39.40 O
ATOM 4 OP2 A A1082 31.707 103.377 122.263 1.00 39.59 O
ATOM 5 O5' A A1082 33.879 103.659 123.462 1.00 39.08 O
ATOM 6 C5' A A1082 34.274 102.295 123.468 1.00 40.43 C
ATOM 7 C4' A A1082 35.328 102.089 122.429 1.00 42.69 C
ATOM 8 O4' A A1082 36.352 103.095 122.601 1.00 42.44 O
ATOM 9 C3' A A1082 36.030 100.746 122.439 1.00 42.82 C
ATOM 10 O3' A A1082 36.364 100.462 121.092 1.00 44.15 O
ATOM 11 C2' A A1082 37.300 101.055 123.219 1.00 41.99 C
ATOM 12 O2' A A1082 38.360 100.198 122.875 1.00 43.83 O
ATOM 13 C1' A A1082 37.607 102.467 122.728 1.00 42.05 C
ATOM 14 N9 A A1082 38.451 103.301 123.596 1.00 40.89 N
ATOM 15 C8 A A1082 38.795 103.124 124.910 1.00 39.29 C
ATOM 16 N7 A A1082 39.544 104.080 125.391 1.00 38.94 N
ATOM 17 C5 A A1082 39.713 104.946 124.323 1.00 38.44 C
ATOM 18 C6 A A1082 40.405 106.163 124.187 1.00 38.89 C
ATOM 19 N6 A A1082 41.071 106.754 125.184 1.00 38.32 N
ATOM 20 N1 A A1082 40.385 106.768 122.974 1.00 38.66 N
ATOM 21 C2 A A1082 39.698 106.187 121.981 1.00 38.32 C
ATOM 22 N3 A A1082 39.002 105.056 121.993 1.00 38.46 N
ATOM 23 C4 A A1082 39.054 104.476 123.207 1.00 39.51 C
ATOM 24 P A A1083 35.274 99.795 120.122 1.00 45.42 P
ATOM 25 OP1 A A1083 35.758 100.128 118.767 1.00 46.38 O
ATOM 26 OP2 A A1083 33.887 100.180 120.522 1.00 46.31 O
ATOM 27 O5' A A1083 35.438 98.236 120.398 1.00 43.48 O
TER
ATOM 1 O3' U B1196 39.431 111.692 126.791 1.00 39.77 O
ATOM 2 P C B1197 39.614 110.160 126.387 1.00 37.67 P
ATOM 3 OP1 C B1197 39.183 109.319 127.534 1.00 39.27 O
ATOM 4 OP2 C B1197 40.975 109.994 125.844 1.00 36.34 O
ATOM 5 O5' C B1197 38.560 109.987 125.201 1.00 38.83 O
ATOM 6 C5' C B1197 38.510 108.768 124.433 1.00 40.36 C
ATOM 7 C4' C B1197 37.107 108.179 124.423 1.00 41.07 C
ATOM 8 O4' C B1197 36.329 108.672 125.551 1.00 40.19 O
ATOM 9 C3' C B1197 36.213 108.570 123.254 1.00 40.04 C
ATOM 10 O3' C B1197 36.493 107.877 122.038 1.00 39.75 O
ATOM 11 C2' C B1197 34.826 108.188 123.766 1.00 39.96 C
ATOM 12 O2' C B1197 34.464 106.829 123.609 1.00 39.22 O
ATOM 13 C1' C B1197 34.948 108.517 125.251 1.00 39.49 C
ATOM 14 N1 C B1197 34.192 109.734 125.610 1.00 38.38 N
ATOM 15 C2 C B1197 32.808 109.598 125.806 1.00 37.43 C
ATOM 16 O2 C B1197 32.283 108.485 125.644 1.00 35.92 O
ATOM 17 N3 C B1197 32.078 110.678 126.155 1.00 37.83 N
ATOM 18 C4 C B1197 32.669 111.862 126.297 1.00 37.50 C
ATOM 19 N4 C B1197 31.899 112.888 126.663 1.00 37.81 N
ATOM 20 C5 C B1197 34.073 112.041 126.080 1.00 35.07 C
ATOM 21 C6 C B1197 34.790 110.960 125.747 1.00 36.41 C
ATOM 22 P G B1198 37.116 108.677 120.800 1.00 37.84 P
ATOM 23 OP1 G B1198 37.033 107.791 119.625 1.00 39.37 O
ATOM 24 OP2 G B1198 38.432 109.195 121.242 1.00 37.95 O
ATOM 25 O5' G B1198 36.124 109.897 120.556 1.00 37.63 O
TER
Atoms:
OP1: (32.247,105.521,123.573)
OP2: (31.707,103.377,122.263)
C3': (36.030,100.746,122.439)
C1': (37.607,102.467,122.728)
C5': (34.274,102.295,123.468)
O4': (36.352,103.095,122.601)
C8: (38.795,103.124,124.910)
O2': (38.360,100.198,122.875)
C6: (40.405,106.163,124.187)
C5: (39.713,104.946,124.323)
C4: (39.054,104.476,123.207)
P: (32.348,104.044,123.416)
C4': (35.328,102.089,122.429)
C2': (37.300,101.055,123.219)
C2: (39.698,106.187,121.981)
N1: (40.385,106.768,122.974)
N3: (39.002,105.056,121.993)
N6: (41.071,106.754,125.184)
N7: (39.544,104.080,125.391)
N9: (38.451,103.301,123.596)
O5': (33.879,103.659,123.462)
O3': (36.364,100.462,121.092)
OP2: (31.707,103.377,122.263)
C3': (36.030,100.746,122.439)
C1': (37.607,102.467,122.728)
C5': (34.274,102.295,123.468)
O4': (36.352,103.095,122.601)
C8: (38.795,103.124,124.910)
O2': (38.360,100.198,122.875)
C6: (40.405,106.163,124.187)
C5: (39.713,104.946,124.323)
C4: (39.054,104.476,123.207)
P: (32.348,104.044,123.416)
C4': (35.328,102.089,122.429)
C2': (37.300,101.055,123.219)
C2: (39.698,106.187,121.981)
N1: (40.385,106.768,122.974)
N3: (39.002,105.056,121.993)
N6: (41.071,106.754,125.184)
N7: (39.544,104.080,125.391)
N9: (38.451,103.301,123.596)
O5': (33.879,103.659,123.462)
O3': (36.364,100.462,121.092)
C2: (32.808,109.598,125.806)
OP1: (39.183,109.319,127.534)
OP2: (40.975,109.994,125.844)
C4: (32.669,111.862,126.297)
O5': (38.560,109.987,125.201)
C3': (36.213,108.570,123.254)
C1': (34.948,108.517,125.251)
O4': (36.329,108.672,125.551)
C5': (38.510,108.768,124.433)
P: (39.614,110.160,126.387)
O2: (32.283,108.485,125.644)
C4': (37.107,108.179,124.423)
C2': (34.826,108.188,123.766)
O2': (34.464,106.829,123.609)
N1: (34.192,109.734,125.610)
N3: (32.078,110.678,126.155)
N4: (31.899,112.888,126.663)
C6: (34.790,110.960,125.747)
C5: (34.073,112.041,126.080)
O3': (36.493,107.877,122.038)
OP1: (39.183,109.319,127.534)
OP2: (40.975,109.994,125.844)
C4: (32.669,111.862,126.297)
O5': (38.560,109.987,125.201)
C3': (36.213,108.570,123.254)
C1': (34.948,108.517,125.251)
O4': (36.329,108.672,125.551)
C5': (38.510,108.768,124.433)
P: (39.614,110.160,126.387)
O2: (32.283,108.485,125.644)
C4': (37.107,108.179,124.423)
C2': (34.826,108.188,123.766)
O2': (34.464,106.829,123.609)
N1: (34.192,109.734,125.610)
N3: (32.078,110.678,126.155)
N4: (31.899,112.888,126.663)
C6: (34.790,110.960,125.747)
C5: (34.073,112.041,126.080)
O3': (36.493,107.877,122.038)
Image (generated by PyMOL):