Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R9W:B11:B12
Extra
PDB:
ATOM 1 O3' G A 10 -44.625 -3.787 8.351 1.00131.89 O
ATOM 2 P G A 11 -43.275 -2.956 8.093 0.39115.00 P
ATOM 3 OP1 G A 11 -42.385 -3.203 9.252 0.55115.87 O
ATOM 4 OP2 G A 11 -43.670 -1.560 7.787 0.67115.76 O
ATOM 5 O5' G A 11 -42.677 -3.650 6.789 1.00135.46 O
ATOM 6 C5' G A 11 -42.007 -4.904 6.868 1.00137.20 C
ATOM 7 C4' G A 11 -42.366 -5.799 5.707 1.00136.51 C
ATOM 8 O4' G A 11 -43.721 -5.515 5.287 1.00135.66 O
ATOM 9 C3' G A 11 -41.528 -5.633 4.440 1.00140.03 C
ATOM 10 O3' G A 11 -40.308 -6.371 4.485 1.00143.00 O
ATOM 11 C2' G A 11 -42.479 -6.092 3.341 1.00141.81 C
ATOM 12 O2' G A 11 -42.473 -7.507 3.234 1.00146.82 O
ATOM 13 C1' G A 11 -43.840 -5.658 3.892 1.00138.03 C
ATOM 14 N9 G A 11 -44.304 -4.377 3.324 1.00135.95 N
ATOM 15 C8 G A 11 -44.036 -3.119 3.807 1.00134.56 C
ATOM 16 N7 G A 11 -44.605 -2.176 3.105 1.00133.62 N
ATOM 17 C5 G A 11 -45.299 -2.847 2.104 1.00132.59 C
ATOM 18 C6 G A 11 -46.106 -2.351 1.042 1.00130.84 C
ATOM 19 O6 G A 11 -46.381 -1.180 0.759 1.00130.67 O
ATOM 20 N1 G A 11 -46.622 -3.375 0.257 1.00129.18 N
ATOM 21 C2 G A 11 -46.398 -4.709 0.464 1.00128.33 C
ATOM 22 N2 G A 11 -46.997 -5.533 -0.405 1.00126.44 N
ATOM 23 N3 G A 11 -45.651 -5.188 1.448 1.00131.34 N
ATOM 24 C4 G A 11 -45.133 -4.210 2.230 1.00133.76 C
ATOM 25 P A A 12 -39.428 -6.609 3.149 0.50130.53 P
ATOM 26 OP1 A A 12 -38.005 -6.650 3.568 0.50129.96 O
ATOM 27 OP2 A A 12 -39.846 -5.590 2.156 0.50128.64 O
ATOM 28 O5' A A 12 -39.891 -8.061 2.666 1.00144.41 O
TER
ATOM 1 O3' G B 11 -40.308 -6.371 4.485 1.00143.00 O
ATOM 2 P A B 12 -39.428 -6.609 3.149 0.50130.53 P
ATOM 3 OP1 A B 12 -38.005 -6.650 3.568 0.50129.96 O
ATOM 4 OP2 A B 12 -39.846 -5.590 2.156 0.50128.64 O
ATOM 5 O5' A B 12 -39.891 -8.061 2.666 1.00144.41 O
ATOM 6 C5' A B 12 -39.793 -9.184 3.536 1.00143.58 C
ATOM 7 C4' A B 12 -40.449 -10.420 2.953 1.00140.22 C
ATOM 8 O4' A B 12 -41.822 -10.133 2.574 1.00139.41 O
ATOM 9 C3' A B 12 -39.839 -10.975 1.677 1.00136.16 C
ATOM 10 O3' A B 12 -38.654 -11.714 1.896 1.00134.74 O
ATOM 11 C2' A B 12 -40.982 -11.806 1.112 1.00134.70 C
ATOM 12 O2' A B 12 -41.114 -13.027 1.823 1.00133.31 O
ATOM 13 C1' A B 12 -42.180 -10.920 1.449 1.00136.63 C
ATOM 14 N9 A B 12 -42.521 -10.022 0.328 1.00136.00 N
ATOM 15 C8 A B 12 -42.536 -8.650 0.288 1.00135.45 C
ATOM 16 N7 A B 12 -42.874 -8.160 -0.883 1.00135.33 N
ATOM 17 C5 A B 12 -43.090 -9.282 -1.674 1.00135.83 C
ATOM 18 C6 A B 12 -43.472 -9.444 -3.025 1.00134.20 C
ATOM 19 N6 A B 12 -43.717 -8.440 -3.867 1.00130.03 N
ATOM 20 N1 A B 12 -43.597 -10.705 -3.495 1.00136.76 N
ATOM 21 C2 A B 12 -43.353 -11.726 -2.659 1.00138.61 C
ATOM 22 N3 A B 12 -42.987 -11.702 -1.378 1.00138.15 N
ATOM 23 C4 A B 12 -42.873 -10.435 -0.938 1.00136.82 C
ATOM 24 P A B 13 -37.493 -11.715 0.784 1.00145.15 P
ATOM 25 OP1 A B 13 -36.374 -12.521 1.326 1.00147.55 O
ATOM 26 OP2 A B 13 -37.239 -10.297 0.419 1.00142.55 O
ATOM 27 O5' A B 13 -38.173 -12.479 -0.444 1.00109.16 O
TER
ATOM 2 P G A 11 -43.275 -2.956 8.093 0.39115.00 P
ATOM 3 OP1 G A 11 -42.385 -3.203 9.252 0.55115.87 O
ATOM 4 OP2 G A 11 -43.670 -1.560 7.787 0.67115.76 O
ATOM 5 O5' G A 11 -42.677 -3.650 6.789 1.00135.46 O
ATOM 6 C5' G A 11 -42.007 -4.904 6.868 1.00137.20 C
ATOM 7 C4' G A 11 -42.366 -5.799 5.707 1.00136.51 C
ATOM 8 O4' G A 11 -43.721 -5.515 5.287 1.00135.66 O
ATOM 9 C3' G A 11 -41.528 -5.633 4.440 1.00140.03 C
ATOM 10 O3' G A 11 -40.308 -6.371 4.485 1.00143.00 O
ATOM 11 C2' G A 11 -42.479 -6.092 3.341 1.00141.81 C
ATOM 12 O2' G A 11 -42.473 -7.507 3.234 1.00146.82 O
ATOM 13 C1' G A 11 -43.840 -5.658 3.892 1.00138.03 C
ATOM 14 N9 G A 11 -44.304 -4.377 3.324 1.00135.95 N
ATOM 15 C8 G A 11 -44.036 -3.119 3.807 1.00134.56 C
ATOM 16 N7 G A 11 -44.605 -2.176 3.105 1.00133.62 N
ATOM 17 C5 G A 11 -45.299 -2.847 2.104 1.00132.59 C
ATOM 18 C6 G A 11 -46.106 -2.351 1.042 1.00130.84 C
ATOM 19 O6 G A 11 -46.381 -1.180 0.759 1.00130.67 O
ATOM 20 N1 G A 11 -46.622 -3.375 0.257 1.00129.18 N
ATOM 21 C2 G A 11 -46.398 -4.709 0.464 1.00128.33 C
ATOM 22 N2 G A 11 -46.997 -5.533 -0.405 1.00126.44 N
ATOM 23 N3 G A 11 -45.651 -5.188 1.448 1.00131.34 N
ATOM 24 C4 G A 11 -45.133 -4.210 2.230 1.00133.76 C
ATOM 25 P A A 12 -39.428 -6.609 3.149 0.50130.53 P
ATOM 26 OP1 A A 12 -38.005 -6.650 3.568 0.50129.96 O
ATOM 27 OP2 A A 12 -39.846 -5.590 2.156 0.50128.64 O
ATOM 28 O5' A A 12 -39.891 -8.061 2.666 1.00144.41 O
TER
ATOM 1 O3' G B 11 -40.308 -6.371 4.485 1.00143.00 O
ATOM 2 P A B 12 -39.428 -6.609 3.149 0.50130.53 P
ATOM 3 OP1 A B 12 -38.005 -6.650 3.568 0.50129.96 O
ATOM 4 OP2 A B 12 -39.846 -5.590 2.156 0.50128.64 O
ATOM 5 O5' A B 12 -39.891 -8.061 2.666 1.00144.41 O
ATOM 6 C5' A B 12 -39.793 -9.184 3.536 1.00143.58 C
ATOM 7 C4' A B 12 -40.449 -10.420 2.953 1.00140.22 C
ATOM 8 O4' A B 12 -41.822 -10.133 2.574 1.00139.41 O
ATOM 9 C3' A B 12 -39.839 -10.975 1.677 1.00136.16 C
ATOM 10 O3' A B 12 -38.654 -11.714 1.896 1.00134.74 O
ATOM 11 C2' A B 12 -40.982 -11.806 1.112 1.00134.70 C
ATOM 12 O2' A B 12 -41.114 -13.027 1.823 1.00133.31 O
ATOM 13 C1' A B 12 -42.180 -10.920 1.449 1.00136.63 C
ATOM 14 N9 A B 12 -42.521 -10.022 0.328 1.00136.00 N
ATOM 15 C8 A B 12 -42.536 -8.650 0.288 1.00135.45 C
ATOM 16 N7 A B 12 -42.874 -8.160 -0.883 1.00135.33 N
ATOM 17 C5 A B 12 -43.090 -9.282 -1.674 1.00135.83 C
ATOM 18 C6 A B 12 -43.472 -9.444 -3.025 1.00134.20 C
ATOM 19 N6 A B 12 -43.717 -8.440 -3.867 1.00130.03 N
ATOM 20 N1 A B 12 -43.597 -10.705 -3.495 1.00136.76 N
ATOM 21 C2 A B 12 -43.353 -11.726 -2.659 1.00138.61 C
ATOM 22 N3 A B 12 -42.987 -11.702 -1.378 1.00138.15 N
ATOM 23 C4 A B 12 -42.873 -10.435 -0.938 1.00136.82 C
ATOM 24 P A B 13 -37.493 -11.715 0.784 1.00145.15 P
ATOM 25 OP1 A B 13 -36.374 -12.521 1.326 1.00147.55 O
ATOM 26 OP2 A B 13 -37.239 -10.297 0.419 1.00142.55 O
ATOM 27 O5' A B 13 -38.173 -12.479 -0.444 1.00109.16 O
TER
Atoms:
OP1: (-42.385,-3.203,9.252)
OP2: (-43.670,-1.560,7.787)
C3': (-41.528,-5.633,4.440)
C1': (-43.840,-5.658,3.892)
C5': (-42.007,-4.904,6.868)
O6: (-46.381,-1.180,0.759)
O4': (-43.721,-5.515,5.287)
C8: (-44.036,-3.119,3.807)
C2: (-46.398,-4.709,0.464)
C6: (-46.106,-2.351,1.042)
C5: (-45.299,-2.847,2.104)
C4: (-45.133,-4.210,2.230)
P: (-43.275,-2.956,8.093)
C4': (-42.366,-5.799,5.707)
C2': (-42.479,-6.092,3.341)
O2': (-42.473,-7.507,3.234)
N1: (-46.622,-3.375,0.257)
N2: (-46.997,-5.533,-0.405)
N3: (-45.651,-5.188,1.448)
N7: (-44.605,-2.176,3.105)
N9: (-44.304,-4.377,3.324)
O5': (-42.677,-3.650,6.789)
O3': (-40.308,-6.371,4.485)
OP2: (-43.670,-1.560,7.787)
C3': (-41.528,-5.633,4.440)
C1': (-43.840,-5.658,3.892)
C5': (-42.007,-4.904,6.868)
O6: (-46.381,-1.180,0.759)
O4': (-43.721,-5.515,5.287)
C8: (-44.036,-3.119,3.807)
C2: (-46.398,-4.709,0.464)
C6: (-46.106,-2.351,1.042)
C5: (-45.299,-2.847,2.104)
C4: (-45.133,-4.210,2.230)
P: (-43.275,-2.956,8.093)
C4': (-42.366,-5.799,5.707)
C2': (-42.479,-6.092,3.341)
O2': (-42.473,-7.507,3.234)
N1: (-46.622,-3.375,0.257)
N2: (-46.997,-5.533,-0.405)
N3: (-45.651,-5.188,1.448)
N7: (-44.605,-2.176,3.105)
N9: (-44.304,-4.377,3.324)
O5': (-42.677,-3.650,6.789)
O3': (-40.308,-6.371,4.485)
OP1: (-38.005,-6.650,3.568)
OP2: (-39.846,-5.590,2.156)
C3': (-39.839,-10.975,1.677)
C1': (-42.180,-10.920,1.449)
C5': (-39.793,-9.184,3.536)
O4': (-41.822,-10.133,2.574)
C8: (-42.536,-8.650,0.288)
O2': (-41.114,-13.027,1.823)
C6: (-43.472,-9.444,-3.025)
C5: (-43.090,-9.282,-1.674)
C4: (-42.873,-10.435,-0.938)
P: (-39.428,-6.609,3.149)
C4': (-40.449,-10.420,2.953)
C2': (-40.982,-11.806,1.112)
C2: (-43.353,-11.726,-2.659)
N1: (-43.597,-10.705,-3.495)
N3: (-42.987,-11.702,-1.378)
N6: (-43.717,-8.440,-3.867)
N7: (-42.874,-8.160,-0.883)
N9: (-42.521,-10.022,0.328)
O5': (-39.891,-8.061,2.666)
O3': (-38.654,-11.714,1.896)
OP2: (-39.846,-5.590,2.156)
C3': (-39.839,-10.975,1.677)
C1': (-42.180,-10.920,1.449)
C5': (-39.793,-9.184,3.536)
O4': (-41.822,-10.133,2.574)
C8: (-42.536,-8.650,0.288)
O2': (-41.114,-13.027,1.823)
C6: (-43.472,-9.444,-3.025)
C5: (-43.090,-9.282,-1.674)
C4: (-42.873,-10.435,-0.938)
P: (-39.428,-6.609,3.149)
C4': (-40.449,-10.420,2.953)
C2': (-40.982,-11.806,1.112)
C2: (-43.353,-11.726,-2.659)
N1: (-43.597,-10.705,-3.495)
N3: (-42.987,-11.702,-1.378)
N6: (-43.717,-8.440,-3.867)
N7: (-42.874,-8.160,-0.883)
N9: (-42.521,-10.022,0.328)
O5': (-39.891,-8.061,2.666)
O3': (-38.654,-11.714,1.896)
Image (generated by PyMOL):