Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQL:0580:0581
Extra
PDB:
ATOM 1 O3' A A 579 -6.523 102.382 106.101 1.00 59.33 O
ATOM 2 P G A 580 -6.485 102.758 104.539 1.00 57.53 P
ATOM 3 OP1 G A 580 -6.266 104.222 104.463 1.00 57.72 O
ATOM 4 OP2 G A 580 -7.665 102.149 103.868 1.00 59.23 O
ATOM 5 O5' G A 580 -5.198 102.002 103.983 1.00 57.12 O
ATOM 6 C5' G A 580 -3.878 102.303 104.477 1.00 52.35 C
ATOM 7 C4' G A 580 -2.880 101.355 103.865 1.00 52.31 C
ATOM 8 O4' G A 580 -3.140 100.010 104.336 1.00 51.21 O
ATOM 9 C3' G A 580 -2.950 101.253 102.350 1.00 52.54 C
ATOM 10 O3' G A 580 -2.158 102.260 101.739 1.00 55.05 O
ATOM 11 C2' G A 580 -2.369 99.870 102.083 1.00 52.15 C
ATOM 12 O2' G A 580 -0.957 99.852 102.055 1.00 55.12 O
ATOM 13 C1' G A 580 -2.880 99.081 103.295 1.00 50.91 C
ATOM 14 N9 G A 580 -4.114 98.359 103.003 1.00 49.33 N
ATOM 15 C8 G A 580 -5.404 98.802 103.189 1.00 48.45 C
ATOM 16 N7 G A 580 -6.300 97.947 102.783 1.00 48.86 N
ATOM 17 C5 G A 580 -5.560 96.872 102.314 1.00 47.58 C
ATOM 18 C6 G A 580 -5.983 95.661 101.740 1.00 46.44 C
ATOM 19 O6 G A 580 -7.135 95.280 101.518 1.00 48.48 O
ATOM 20 N1 G A 580 -4.906 94.851 101.404 1.00 46.16 N
ATOM 21 C2 G A 580 -3.585 95.169 101.601 1.00 47.91 C
ATOM 22 N2 G A 580 -2.682 94.242 101.232 1.00 46.33 N
ATOM 23 N3 G A 580 -3.177 96.307 102.128 1.00 47.69 N
ATOM 24 C4 G A 580 -4.210 97.106 102.457 1.00 47.81 C
ATOM 25 P A A 581 -2.846 103.595 101.173 1.00 56.63 P
ATOM 26 OP1 A A 581 -2.873 104.600 102.271 1.00 54.56 O
ATOM 27 OP2 A A 581 -4.098 103.250 100.465 1.00 56.86 O
ATOM 28 O5' A A 581 -1.807 104.098 100.077 1.00 57.78 O
TER
ATOM 1 O3' G B 580 -2.158 102.260 101.739 1.00 55.05 O
ATOM 2 P A B 581 -2.846 103.595 101.173 1.00 56.63 P
ATOM 3 OP1 A B 581 -2.873 104.600 102.271 1.00 54.56 O
ATOM 4 OP2 A B 581 -4.098 103.250 100.465 1.00 56.86 O
ATOM 5 O5' A B 581 -1.807 104.098 100.077 1.00 57.78 O
ATOM 6 C5' A B 581 -0.469 104.498 100.439 1.00 54.26 C
ATOM 7 C4' A B 581 0.480 104.184 99.311 1.00 53.38 C
ATOM 8 O4' A B 581 0.654 102.749 99.212 1.00 53.59 O
ATOM 9 C3' A B 581 -0.011 104.610 97.939 1.00 52.00 C
ATOM 10 O3' A B 581 0.300 105.975 97.690 1.00 49.61 O
ATOM 11 C2' A B 581 0.730 103.652 97.021 1.00 53.15 C
ATOM 12 O2' A B 581 2.072 104.040 96.825 1.00 55.30 O
ATOM 13 C1' A B 581 0.701 102.364 97.848 1.00 55.90 C
ATOM 14 N9 A B 581 -0.475 101.534 97.578 1.00 59.93 N
ATOM 15 C8 A B 581 -1.540 101.298 98.417 1.00 61.50 C
ATOM 16 N7 A B 581 -2.469 100.540 97.891 1.00 63.10 N
ATOM 17 C5 A B 581 -1.985 100.250 96.624 1.00 63.32 C
ATOM 18 C6 A B 581 -2.514 99.497 95.560 1.00 64.31 C
ATOM 19 N6 A B 581 -3.694 98.872 95.608 1.00 62.68 N
ATOM 20 N1 A B 581 -1.781 99.409 94.428 1.00 65.03 N
ATOM 21 C2 A B 581 -0.599 100.039 94.382 1.00 65.19 C
ATOM 22 N3 A B 581 0.003 100.775 95.314 1.00 63.97 N
ATOM 23 C4 A B 581 -0.751 100.845 96.421 1.00 62.00 C
ATOM 24 P C B 582 -0.740 106.898 96.888 1.00 47.91 P
ATOM 25 OP1 C B 582 -0.111 108.223 96.684 1.00 48.93 O
ATOM 26 OP2 C B 582 -2.054 106.823 97.558 1.00 51.33 O
ATOM 27 O5' C B 582 -0.878 106.175 95.478 1.00 47.44 O
TER
ATOM 2 P G A 580 -6.485 102.758 104.539 1.00 57.53 P
ATOM 3 OP1 G A 580 -6.266 104.222 104.463 1.00 57.72 O
ATOM 4 OP2 G A 580 -7.665 102.149 103.868 1.00 59.23 O
ATOM 5 O5' G A 580 -5.198 102.002 103.983 1.00 57.12 O
ATOM 6 C5' G A 580 -3.878 102.303 104.477 1.00 52.35 C
ATOM 7 C4' G A 580 -2.880 101.355 103.865 1.00 52.31 C
ATOM 8 O4' G A 580 -3.140 100.010 104.336 1.00 51.21 O
ATOM 9 C3' G A 580 -2.950 101.253 102.350 1.00 52.54 C
ATOM 10 O3' G A 580 -2.158 102.260 101.739 1.00 55.05 O
ATOM 11 C2' G A 580 -2.369 99.870 102.083 1.00 52.15 C
ATOM 12 O2' G A 580 -0.957 99.852 102.055 1.00 55.12 O
ATOM 13 C1' G A 580 -2.880 99.081 103.295 1.00 50.91 C
ATOM 14 N9 G A 580 -4.114 98.359 103.003 1.00 49.33 N
ATOM 15 C8 G A 580 -5.404 98.802 103.189 1.00 48.45 C
ATOM 16 N7 G A 580 -6.300 97.947 102.783 1.00 48.86 N
ATOM 17 C5 G A 580 -5.560 96.872 102.314 1.00 47.58 C
ATOM 18 C6 G A 580 -5.983 95.661 101.740 1.00 46.44 C
ATOM 19 O6 G A 580 -7.135 95.280 101.518 1.00 48.48 O
ATOM 20 N1 G A 580 -4.906 94.851 101.404 1.00 46.16 N
ATOM 21 C2 G A 580 -3.585 95.169 101.601 1.00 47.91 C
ATOM 22 N2 G A 580 -2.682 94.242 101.232 1.00 46.33 N
ATOM 23 N3 G A 580 -3.177 96.307 102.128 1.00 47.69 N
ATOM 24 C4 G A 580 -4.210 97.106 102.457 1.00 47.81 C
ATOM 25 P A A 581 -2.846 103.595 101.173 1.00 56.63 P
ATOM 26 OP1 A A 581 -2.873 104.600 102.271 1.00 54.56 O
ATOM 27 OP2 A A 581 -4.098 103.250 100.465 1.00 56.86 O
ATOM 28 O5' A A 581 -1.807 104.098 100.077 1.00 57.78 O
TER
ATOM 1 O3' G B 580 -2.158 102.260 101.739 1.00 55.05 O
ATOM 2 P A B 581 -2.846 103.595 101.173 1.00 56.63 P
ATOM 3 OP1 A B 581 -2.873 104.600 102.271 1.00 54.56 O
ATOM 4 OP2 A B 581 -4.098 103.250 100.465 1.00 56.86 O
ATOM 5 O5' A B 581 -1.807 104.098 100.077 1.00 57.78 O
ATOM 6 C5' A B 581 -0.469 104.498 100.439 1.00 54.26 C
ATOM 7 C4' A B 581 0.480 104.184 99.311 1.00 53.38 C
ATOM 8 O4' A B 581 0.654 102.749 99.212 1.00 53.59 O
ATOM 9 C3' A B 581 -0.011 104.610 97.939 1.00 52.00 C
ATOM 10 O3' A B 581 0.300 105.975 97.690 1.00 49.61 O
ATOM 11 C2' A B 581 0.730 103.652 97.021 1.00 53.15 C
ATOM 12 O2' A B 581 2.072 104.040 96.825 1.00 55.30 O
ATOM 13 C1' A B 581 0.701 102.364 97.848 1.00 55.90 C
ATOM 14 N9 A B 581 -0.475 101.534 97.578 1.00 59.93 N
ATOM 15 C8 A B 581 -1.540 101.298 98.417 1.00 61.50 C
ATOM 16 N7 A B 581 -2.469 100.540 97.891 1.00 63.10 N
ATOM 17 C5 A B 581 -1.985 100.250 96.624 1.00 63.32 C
ATOM 18 C6 A B 581 -2.514 99.497 95.560 1.00 64.31 C
ATOM 19 N6 A B 581 -3.694 98.872 95.608 1.00 62.68 N
ATOM 20 N1 A B 581 -1.781 99.409 94.428 1.00 65.03 N
ATOM 21 C2 A B 581 -0.599 100.039 94.382 1.00 65.19 C
ATOM 22 N3 A B 581 0.003 100.775 95.314 1.00 63.97 N
ATOM 23 C4 A B 581 -0.751 100.845 96.421 1.00 62.00 C
ATOM 24 P C B 582 -0.740 106.898 96.888 1.00 47.91 P
ATOM 25 OP1 C B 582 -0.111 108.223 96.684 1.00 48.93 O
ATOM 26 OP2 C B 582 -2.054 106.823 97.558 1.00 51.33 O
ATOM 27 O5' C B 582 -0.878 106.175 95.478 1.00 47.44 O
TER
Atoms:
OP1: (-6.266,104.222,104.463)
OP2: (-7.665,102.149,103.868)
C3': (-2.950,101.253,102.350)
C1': (-2.880,99.081,103.295)
C5': (-3.878,102.303,104.477)
O6: (-7.135,95.280,101.518)
O4': (-3.140,100.010,104.336)
C8: (-5.404,98.802,103.189)
C2: (-3.585,95.169,101.601)
C6: (-5.983,95.661,101.740)
C5: (-5.560,96.872,102.314)
C4: (-4.210,97.106,102.457)
P: (-6.485,102.758,104.539)
C4': (-2.880,101.355,103.865)
C2': (-2.369,99.870,102.083)
O2': (-0.957,99.852,102.055)
N1: (-4.906,94.851,101.404)
N2: (-2.682,94.242,101.232)
N3: (-3.177,96.307,102.128)
N7: (-6.300,97.947,102.783)
N9: (-4.114,98.359,103.003)
O5': (-5.198,102.002,103.983)
O3': (-2.158,102.260,101.739)
OP2: (-7.665,102.149,103.868)
C3': (-2.950,101.253,102.350)
C1': (-2.880,99.081,103.295)
C5': (-3.878,102.303,104.477)
O6: (-7.135,95.280,101.518)
O4': (-3.140,100.010,104.336)
C8: (-5.404,98.802,103.189)
C2: (-3.585,95.169,101.601)
C6: (-5.983,95.661,101.740)
C5: (-5.560,96.872,102.314)
C4: (-4.210,97.106,102.457)
P: (-6.485,102.758,104.539)
C4': (-2.880,101.355,103.865)
C2': (-2.369,99.870,102.083)
O2': (-0.957,99.852,102.055)
N1: (-4.906,94.851,101.404)
N2: (-2.682,94.242,101.232)
N3: (-3.177,96.307,102.128)
N7: (-6.300,97.947,102.783)
N9: (-4.114,98.359,103.003)
O5': (-5.198,102.002,103.983)
O3': (-2.158,102.260,101.739)
OP1: (-2.873,104.600,102.271)
OP2: (-4.098,103.250,100.465)
C3': (-0.011,104.610,97.939)
C1': (0.701,102.364,97.848)
C5': (-0.469,104.498,100.439)
O4': (0.654,102.749,99.212)
C8: (-1.540,101.298,98.417)
O2': (2.072,104.040,96.825)
C6: (-2.514,99.497,95.560)
C5: (-1.985,100.250,96.624)
C4: (-0.751,100.845,96.421)
P: (-2.846,103.595,101.173)
C4': (0.480,104.184,99.311)
C2': (0.730,103.652,97.021)
C2: (-0.599,100.039,94.382)
N1: (-1.781,99.409,94.428)
N3: (0.003,100.775,95.314)
N6: (-3.694,98.872,95.608)
N7: (-2.469,100.540,97.891)
N9: (-0.475,101.534,97.578)
O5': (-1.807,104.098,100.077)
O3': (0.300,105.975,97.690)
OP2: (-4.098,103.250,100.465)
C3': (-0.011,104.610,97.939)
C1': (0.701,102.364,97.848)
C5': (-0.469,104.498,100.439)
O4': (0.654,102.749,99.212)
C8: (-1.540,101.298,98.417)
O2': (2.072,104.040,96.825)
C6: (-2.514,99.497,95.560)
C5: (-1.985,100.250,96.624)
C4: (-0.751,100.845,96.421)
P: (-2.846,103.595,101.173)
C4': (0.480,104.184,99.311)
C2': (0.730,103.652,97.021)
C2: (-0.599,100.039,94.382)
N1: (-1.781,99.409,94.428)
N3: (0.003,100.775,95.314)
N6: (-3.694,98.872,95.608)
N7: (-2.469,100.540,97.891)
N9: (-0.475,101.534,97.578)
O5': (-1.807,104.098,100.077)
O3': (0.300,105.975,97.690)
Image (generated by PyMOL):