Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:0580:0581
Extra
PDB:
ATOM 1 O3' A A 579 -6.549 102.347 106.084 1.00 62.93 O
ATOM 2 P G A 580 -6.515 102.706 104.517 1.00 60.92 P
ATOM 3 OP1 G A 580 -6.318 104.171 104.409 1.00 60.25 O
ATOM 4 OP2 G A 580 -7.690 102.064 103.862 1.00 62.46 O
ATOM 5 O5' G A 580 -5.216 101.960 103.978 1.00 60.20 O
ATOM 6 C5' G A 580 -3.903 102.269 104.486 1.00 56.28 C
ATOM 7 C4' G A 580 -2.899 101.319 103.891 1.00 56.02 C
ATOM 8 O4' G A 580 -3.166 99.978 104.372 1.00 54.38 O
ATOM 9 C3' G A 580 -2.970 101.208 102.376 1.00 56.27 C
ATOM 10 O3' G A 580 -2.160 102.197 101.756 1.00 57.78 O
ATOM 11 C2' G A 580 -2.404 99.817 102.117 1.00 55.43 C
ATOM 12 O2' G A 580 -0.994 99.789 102.085 1.00 58.56 O
ATOM 13 C1' G A 580 -2.915 99.041 103.337 1.00 53.83 C
ATOM 14 N9 G A 580 -4.154 98.325 103.052 1.00 52.12 N
ATOM 15 C8 G A 580 -5.439 98.777 103.248 1.00 52.32 C
ATOM 16 N7 G A 580 -6.344 97.933 102.840 1.00 51.66 N
ATOM 17 C5 G A 580 -5.615 96.856 102.359 1.00 50.12 C
ATOM 18 C6 G A 580 -6.051 95.657 101.779 1.00 49.61 C
ATOM 19 O6 G A 580 -7.206 95.289 101.556 1.00 50.84 O
ATOM 20 N1 G A 580 -4.983 94.838 101.434 1.00 49.84 N
ATOM 21 C2 G A 580 -3.659 95.140 101.628 1.00 50.45 C
ATOM 22 N2 G A 580 -2.772 94.205 101.244 1.00 50.05 N
ATOM 23 N3 G A 580 -3.238 96.267 102.162 1.00 50.37 N
ATOM 24 C4 G A 580 -4.263 97.075 102.500 1.00 50.54 C
ATOM 25 P A A 581 -2.806 103.582 101.250 1.00 60.42 P
ATOM 26 OP1 A A 581 -2.727 104.569 102.367 1.00 55.85 O
ATOM 27 OP2 A A 581 -4.105 103.336 100.585 1.00 58.88 O
ATOM 28 O5' A A 581 -1.776 104.050 100.129 1.00 59.86 O
TER
ATOM 1 O3' G B 580 -2.160 102.197 101.756 1.00 57.78 O
ATOM 2 P A B 581 -2.806 103.582 101.250 1.00 60.42 P
ATOM 3 OP1 A B 581 -2.727 104.569 102.367 1.00 55.85 O
ATOM 4 OP2 A B 581 -4.105 103.336 100.585 1.00 58.88 O
ATOM 5 O5' A B 581 -1.776 104.050 100.129 1.00 59.86 O
ATOM 6 C5' A B 581 -0.432 104.448 100.473 1.00 56.85 C
ATOM 7 C4' A B 581 0.498 104.156 99.326 1.00 56.58 C
ATOM 8 O4' A B 581 0.682 102.725 99.201 1.00 57.32 O
ATOM 9 C3' A B 581 -0.018 104.600 97.969 1.00 55.66 C
ATOM 10 O3' A B 581 0.272 105.972 97.743 1.00 52.37 O
ATOM 11 C2' A B 581 0.725 103.667 97.026 1.00 57.03 C
ATOM 12 O2' A B 581 2.065 104.072 96.836 1.00 59.22 O
ATOM 13 C1' A B 581 0.715 102.364 97.830 1.00 59.32 C
ATOM 14 N9 A B 581 -0.453 101.524 97.563 1.00 64.05 N
ATOM 15 C8 A B 581 -1.501 101.263 98.415 1.00 65.32 C
ATOM 16 N7 A B 581 -2.421 100.488 97.899 1.00 67.26 N
ATOM 17 C5 A B 581 -1.952 100.216 96.622 1.00 67.49 C
ATOM 18 C6 A B 581 -2.482 99.455 95.563 1.00 68.74 C
ATOM 19 N6 A B 581 -3.645 98.800 95.627 1.00 67.24 N
ATOM 20 N1 A B 581 -1.765 99.389 94.418 1.00 69.81 N
ATOM 21 C2 A B 581 -0.598 100.046 94.356 1.00 69.46 C
ATOM 22 N3 A B 581 0.002 100.791 95.284 1.00 68.44 N
ATOM 23 C4 A B 581 -0.736 100.839 96.404 1.00 66.13 C
ATOM 24 P C B 582 -0.773 106.890 96.944 1.00 52.53 P
ATOM 25 OP1 C B 582 -0.149 108.220 96.746 1.00 53.12 O
ATOM 26 OP2 C B 582 -2.086 106.805 97.614 1.00 54.63 O
ATOM 27 O5' C B 582 -0.901 106.176 95.530 1.00 50.33 O
TER
ATOM 2 P G A 580 -6.515 102.706 104.517 1.00 60.92 P
ATOM 3 OP1 G A 580 -6.318 104.171 104.409 1.00 60.25 O
ATOM 4 OP2 G A 580 -7.690 102.064 103.862 1.00 62.46 O
ATOM 5 O5' G A 580 -5.216 101.960 103.978 1.00 60.20 O
ATOM 6 C5' G A 580 -3.903 102.269 104.486 1.00 56.28 C
ATOM 7 C4' G A 580 -2.899 101.319 103.891 1.00 56.02 C
ATOM 8 O4' G A 580 -3.166 99.978 104.372 1.00 54.38 O
ATOM 9 C3' G A 580 -2.970 101.208 102.376 1.00 56.27 C
ATOM 10 O3' G A 580 -2.160 102.197 101.756 1.00 57.78 O
ATOM 11 C2' G A 580 -2.404 99.817 102.117 1.00 55.43 C
ATOM 12 O2' G A 580 -0.994 99.789 102.085 1.00 58.56 O
ATOM 13 C1' G A 580 -2.915 99.041 103.337 1.00 53.83 C
ATOM 14 N9 G A 580 -4.154 98.325 103.052 1.00 52.12 N
ATOM 15 C8 G A 580 -5.439 98.777 103.248 1.00 52.32 C
ATOM 16 N7 G A 580 -6.344 97.933 102.840 1.00 51.66 N
ATOM 17 C5 G A 580 -5.615 96.856 102.359 1.00 50.12 C
ATOM 18 C6 G A 580 -6.051 95.657 101.779 1.00 49.61 C
ATOM 19 O6 G A 580 -7.206 95.289 101.556 1.00 50.84 O
ATOM 20 N1 G A 580 -4.983 94.838 101.434 1.00 49.84 N
ATOM 21 C2 G A 580 -3.659 95.140 101.628 1.00 50.45 C
ATOM 22 N2 G A 580 -2.772 94.205 101.244 1.00 50.05 N
ATOM 23 N3 G A 580 -3.238 96.267 102.162 1.00 50.37 N
ATOM 24 C4 G A 580 -4.263 97.075 102.500 1.00 50.54 C
ATOM 25 P A A 581 -2.806 103.582 101.250 1.00 60.42 P
ATOM 26 OP1 A A 581 -2.727 104.569 102.367 1.00 55.85 O
ATOM 27 OP2 A A 581 -4.105 103.336 100.585 1.00 58.88 O
ATOM 28 O5' A A 581 -1.776 104.050 100.129 1.00 59.86 O
TER
ATOM 1 O3' G B 580 -2.160 102.197 101.756 1.00 57.78 O
ATOM 2 P A B 581 -2.806 103.582 101.250 1.00 60.42 P
ATOM 3 OP1 A B 581 -2.727 104.569 102.367 1.00 55.85 O
ATOM 4 OP2 A B 581 -4.105 103.336 100.585 1.00 58.88 O
ATOM 5 O5' A B 581 -1.776 104.050 100.129 1.00 59.86 O
ATOM 6 C5' A B 581 -0.432 104.448 100.473 1.00 56.85 C
ATOM 7 C4' A B 581 0.498 104.156 99.326 1.00 56.58 C
ATOM 8 O4' A B 581 0.682 102.725 99.201 1.00 57.32 O
ATOM 9 C3' A B 581 -0.018 104.600 97.969 1.00 55.66 C
ATOM 10 O3' A B 581 0.272 105.972 97.743 1.00 52.37 O
ATOM 11 C2' A B 581 0.725 103.667 97.026 1.00 57.03 C
ATOM 12 O2' A B 581 2.065 104.072 96.836 1.00 59.22 O
ATOM 13 C1' A B 581 0.715 102.364 97.830 1.00 59.32 C
ATOM 14 N9 A B 581 -0.453 101.524 97.563 1.00 64.05 N
ATOM 15 C8 A B 581 -1.501 101.263 98.415 1.00 65.32 C
ATOM 16 N7 A B 581 -2.421 100.488 97.899 1.00 67.26 N
ATOM 17 C5 A B 581 -1.952 100.216 96.622 1.00 67.49 C
ATOM 18 C6 A B 581 -2.482 99.455 95.563 1.00 68.74 C
ATOM 19 N6 A B 581 -3.645 98.800 95.627 1.00 67.24 N
ATOM 20 N1 A B 581 -1.765 99.389 94.418 1.00 69.81 N
ATOM 21 C2 A B 581 -0.598 100.046 94.356 1.00 69.46 C
ATOM 22 N3 A B 581 0.002 100.791 95.284 1.00 68.44 N
ATOM 23 C4 A B 581 -0.736 100.839 96.404 1.00 66.13 C
ATOM 24 P C B 582 -0.773 106.890 96.944 1.00 52.53 P
ATOM 25 OP1 C B 582 -0.149 108.220 96.746 1.00 53.12 O
ATOM 26 OP2 C B 582 -2.086 106.805 97.614 1.00 54.63 O
ATOM 27 O5' C B 582 -0.901 106.176 95.530 1.00 50.33 O
TER
Atoms:
OP1: (-6.318,104.171,104.409)
OP2: (-7.690,102.064,103.862)
C3': (-2.970,101.208,102.376)
C1': (-2.915,99.041,103.337)
C5': (-3.903,102.269,104.486)
O6: (-7.206,95.289,101.556)
O4': (-3.166,99.978,104.372)
C8: (-5.439,98.777,103.248)
C2: (-3.659,95.140,101.628)
C6: (-6.051,95.657,101.779)
C5: (-5.615,96.856,102.359)
C4: (-4.263,97.075,102.500)
P: (-6.515,102.706,104.517)
C4': (-2.899,101.319,103.891)
C2': (-2.404,99.817,102.117)
O2': (-0.994,99.789,102.085)
N1: (-4.983,94.838,101.434)
N2: (-2.772,94.205,101.244)
N3: (-3.238,96.267,102.162)
N7: (-6.344,97.933,102.840)
N9: (-4.154,98.325,103.052)
O5': (-5.216,101.960,103.978)
O3': (-2.160,102.197,101.756)
OP2: (-7.690,102.064,103.862)
C3': (-2.970,101.208,102.376)
C1': (-2.915,99.041,103.337)
C5': (-3.903,102.269,104.486)
O6: (-7.206,95.289,101.556)
O4': (-3.166,99.978,104.372)
C8: (-5.439,98.777,103.248)
C2: (-3.659,95.140,101.628)
C6: (-6.051,95.657,101.779)
C5: (-5.615,96.856,102.359)
C4: (-4.263,97.075,102.500)
P: (-6.515,102.706,104.517)
C4': (-2.899,101.319,103.891)
C2': (-2.404,99.817,102.117)
O2': (-0.994,99.789,102.085)
N1: (-4.983,94.838,101.434)
N2: (-2.772,94.205,101.244)
N3: (-3.238,96.267,102.162)
N7: (-6.344,97.933,102.840)
N9: (-4.154,98.325,103.052)
O5': (-5.216,101.960,103.978)
O3': (-2.160,102.197,101.756)
OP1: (-2.727,104.569,102.367)
OP2: (-4.105,103.336,100.585)
C3': (-0.018,104.600,97.969)
C1': (0.715,102.364,97.830)
C5': (-0.432,104.448,100.473)
O4': (0.682,102.725,99.201)
C8: (-1.501,101.263,98.415)
O2': (2.065,104.072,96.836)
C6: (-2.482,99.455,95.563)
C5: (-1.952,100.216,96.622)
C4: (-0.736,100.839,96.404)
P: (-2.806,103.582,101.250)
C4': (0.498,104.156,99.326)
C2': (0.725,103.667,97.026)
C2: (-0.598,100.046,94.356)
N1: (-1.765,99.389,94.418)
N3: (0.002,100.791,95.284)
N6: (-3.645,98.800,95.627)
N7: (-2.421,100.488,97.899)
N9: (-0.453,101.524,97.563)
O5': (-1.776,104.050,100.129)
O3': (0.272,105.972,97.743)
OP2: (-4.105,103.336,100.585)
C3': (-0.018,104.600,97.969)
C1': (0.715,102.364,97.830)
C5': (-0.432,104.448,100.473)
O4': (0.682,102.725,99.201)
C8: (-1.501,101.263,98.415)
O2': (2.065,104.072,96.836)
C6: (-2.482,99.455,95.563)
C5: (-1.952,100.216,96.622)
C4: (-0.736,100.839,96.404)
P: (-2.806,103.582,101.250)
C4': (0.498,104.156,99.326)
C2': (0.725,103.667,97.026)
C2: (-0.598,100.046,94.356)
N1: (-1.765,99.389,94.418)
N3: (0.002,100.791,95.284)
N6: (-3.645,98.800,95.627)
N7: (-2.421,100.488,97.899)
N9: (-0.453,101.524,97.563)
O5': (-1.776,104.050,100.129)
O3': (0.272,105.972,97.743)
Image (generated by PyMOL):