Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:0580:0581
Extra
PDB:
ATOM 1 O3' A A 579 -6.474 102.484 106.232 1.00 57.49 O
ATOM 2 P G A 580 -6.443 102.833 104.661 1.00 56.47 P
ATOM 3 OP1 G A 580 -6.240 104.298 104.541 1.00 56.82 O
ATOM 4 OP2 G A 580 -7.612 102.193 104.004 1.00 58.23 O
ATOM 5 O5' G A 580 -5.150 102.079 104.119 1.00 56.11 O
ATOM 6 C5' G A 580 -3.828 102.432 104.567 1.00 52.41 C
ATOM 7 C4' G A 580 -2.823 101.492 103.953 1.00 51.68 C
ATOM 8 O4' G A 580 -3.062 100.151 104.456 1.00 50.30 O
ATOM 9 C3' G A 580 -2.935 101.366 102.441 1.00 50.98 C
ATOM 10 O3' G A 580 -2.136 102.339 101.776 1.00 53.46 O
ATOM 11 C2' G A 580 -2.355 99.980 102.184 1.00 50.32 C
ATOM 12 O2' G A 580 -0.949 99.981 102.111 1.00 51.95 O
ATOM 13 C1' G A 580 -2.823 99.207 103.423 1.00 49.57 C
ATOM 14 N9 G A 580 -4.058 98.474 103.164 1.00 48.39 N
ATOM 15 C8 G A 580 -5.345 98.914 103.371 1.00 48.77 C
ATOM 16 N7 G A 580 -6.247 98.068 102.960 1.00 48.54 N
ATOM 17 C5 G A 580 -5.514 96.998 102.470 1.00 47.29 C
ATOM 18 C6 G A 580 -5.946 95.801 101.880 1.00 47.05 C
ATOM 19 O6 G A 580 -7.101 95.441 101.640 1.00 50.80 O
ATOM 20 N1 G A 580 -4.876 94.979 101.545 1.00 46.75 N
ATOM 21 C2 G A 580 -3.552 95.280 101.750 1.00 47.99 C
ATOM 22 N2 G A 580 -2.658 94.334 101.384 1.00 44.30 N
ATOM 23 N3 G A 580 -3.135 96.417 102.283 1.00 47.01 N
ATOM 24 C4 G A 580 -4.162 97.222 102.616 1.00 47.02 C
ATOM 25 P A A 581 -2.750 103.772 101.377 1.00 54.82 P
ATOM 26 OP1 A A 581 -2.619 104.657 102.569 1.00 52.68 O
ATOM 27 OP2 A A 581 -4.072 103.612 100.725 1.00 55.33 O
ATOM 28 O5' A A 581 -1.736 104.292 100.264 1.00 55.26 O
TER
ATOM 1 O3' G B 580 -2.136 102.339 101.776 1.00 53.46 O
ATOM 2 P A B 581 -2.750 103.772 101.377 1.00 54.82 P
ATOM 3 OP1 A B 581 -2.619 104.657 102.569 1.00 52.68 O
ATOM 4 OP2 A B 581 -4.072 103.612 100.725 1.00 55.33 O
ATOM 5 O5' A B 581 -1.736 104.292 100.264 1.00 55.26 O
ATOM 6 C5' A B 581 -0.358 104.593 100.581 1.00 52.93 C
ATOM 7 C4' A B 581 0.531 104.258 99.404 1.00 52.91 C
ATOM 8 O4' A B 581 0.678 102.820 99.286 1.00 52.80 O
ATOM 9 C3' A B 581 -0.002 104.707 98.056 1.00 52.29 C
ATOM 10 O3' A B 581 0.312 106.073 97.808 1.00 50.00 O
ATOM 11 C2' A B 581 0.681 103.741 97.098 1.00 53.73 C
ATOM 12 O2' A B 581 2.020 104.097 96.831 1.00 54.45 O
ATOM 13 C1' A B 581 0.669 102.447 97.918 1.00 55.96 C
ATOM 14 N9 A B 581 -0.512 101.609 97.688 1.00 61.08 N
ATOM 15 C8 A B 581 -1.501 101.305 98.594 1.00 62.80 C
ATOM 16 N7 A B 581 -2.451 100.547 98.105 1.00 64.95 N
ATOM 17 C5 A B 581 -2.065 100.333 96.789 1.00 65.11 C
ATOM 18 C6 A B 581 -2.659 99.613 95.731 1.00 66.11 C
ATOM 19 N6 A B 581 -3.813 98.950 95.840 1.00 65.53 N
ATOM 20 N1 A B 581 -2.016 99.598 94.543 1.00 66.29 N
ATOM 21 C2 A B 581 -0.860 100.264 94.436 1.00 66.13 C
ATOM 22 N3 A B 581 -0.204 100.975 95.354 1.00 65.09 N
ATOM 23 C4 A B 581 -0.867 100.972 96.521 1.00 63.18 C
ATOM 24 P C B 582 -0.744 107.007 97.037 1.00 50.32 P
ATOM 25 OP1 C B 582 -0.134 108.348 96.838 1.00 49.25 O
ATOM 26 OP2 C B 582 -2.049 106.907 97.726 1.00 50.79 O
ATOM 27 O5' C B 582 -0.882 106.305 95.616 1.00 47.13 O
TER
ATOM 2 P G A 580 -6.443 102.833 104.661 1.00 56.47 P
ATOM 3 OP1 G A 580 -6.240 104.298 104.541 1.00 56.82 O
ATOM 4 OP2 G A 580 -7.612 102.193 104.004 1.00 58.23 O
ATOM 5 O5' G A 580 -5.150 102.079 104.119 1.00 56.11 O
ATOM 6 C5' G A 580 -3.828 102.432 104.567 1.00 52.41 C
ATOM 7 C4' G A 580 -2.823 101.492 103.953 1.00 51.68 C
ATOM 8 O4' G A 580 -3.062 100.151 104.456 1.00 50.30 O
ATOM 9 C3' G A 580 -2.935 101.366 102.441 1.00 50.98 C
ATOM 10 O3' G A 580 -2.136 102.339 101.776 1.00 53.46 O
ATOM 11 C2' G A 580 -2.355 99.980 102.184 1.00 50.32 C
ATOM 12 O2' G A 580 -0.949 99.981 102.111 1.00 51.95 O
ATOM 13 C1' G A 580 -2.823 99.207 103.423 1.00 49.57 C
ATOM 14 N9 G A 580 -4.058 98.474 103.164 1.00 48.39 N
ATOM 15 C8 G A 580 -5.345 98.914 103.371 1.00 48.77 C
ATOM 16 N7 G A 580 -6.247 98.068 102.960 1.00 48.54 N
ATOM 17 C5 G A 580 -5.514 96.998 102.470 1.00 47.29 C
ATOM 18 C6 G A 580 -5.946 95.801 101.880 1.00 47.05 C
ATOM 19 O6 G A 580 -7.101 95.441 101.640 1.00 50.80 O
ATOM 20 N1 G A 580 -4.876 94.979 101.545 1.00 46.75 N
ATOM 21 C2 G A 580 -3.552 95.280 101.750 1.00 47.99 C
ATOM 22 N2 G A 580 -2.658 94.334 101.384 1.00 44.30 N
ATOM 23 N3 G A 580 -3.135 96.417 102.283 1.00 47.01 N
ATOM 24 C4 G A 580 -4.162 97.222 102.616 1.00 47.02 C
ATOM 25 P A A 581 -2.750 103.772 101.377 1.00 54.82 P
ATOM 26 OP1 A A 581 -2.619 104.657 102.569 1.00 52.68 O
ATOM 27 OP2 A A 581 -4.072 103.612 100.725 1.00 55.33 O
ATOM 28 O5' A A 581 -1.736 104.292 100.264 1.00 55.26 O
TER
ATOM 1 O3' G B 580 -2.136 102.339 101.776 1.00 53.46 O
ATOM 2 P A B 581 -2.750 103.772 101.377 1.00 54.82 P
ATOM 3 OP1 A B 581 -2.619 104.657 102.569 1.00 52.68 O
ATOM 4 OP2 A B 581 -4.072 103.612 100.725 1.00 55.33 O
ATOM 5 O5' A B 581 -1.736 104.292 100.264 1.00 55.26 O
ATOM 6 C5' A B 581 -0.358 104.593 100.581 1.00 52.93 C
ATOM 7 C4' A B 581 0.531 104.258 99.404 1.00 52.91 C
ATOM 8 O4' A B 581 0.678 102.820 99.286 1.00 52.80 O
ATOM 9 C3' A B 581 -0.002 104.707 98.056 1.00 52.29 C
ATOM 10 O3' A B 581 0.312 106.073 97.808 1.00 50.00 O
ATOM 11 C2' A B 581 0.681 103.741 97.098 1.00 53.73 C
ATOM 12 O2' A B 581 2.020 104.097 96.831 1.00 54.45 O
ATOM 13 C1' A B 581 0.669 102.447 97.918 1.00 55.96 C
ATOM 14 N9 A B 581 -0.512 101.609 97.688 1.00 61.08 N
ATOM 15 C8 A B 581 -1.501 101.305 98.594 1.00 62.80 C
ATOM 16 N7 A B 581 -2.451 100.547 98.105 1.00 64.95 N
ATOM 17 C5 A B 581 -2.065 100.333 96.789 1.00 65.11 C
ATOM 18 C6 A B 581 -2.659 99.613 95.731 1.00 66.11 C
ATOM 19 N6 A B 581 -3.813 98.950 95.840 1.00 65.53 N
ATOM 20 N1 A B 581 -2.016 99.598 94.543 1.00 66.29 N
ATOM 21 C2 A B 581 -0.860 100.264 94.436 1.00 66.13 C
ATOM 22 N3 A B 581 -0.204 100.975 95.354 1.00 65.09 N
ATOM 23 C4 A B 581 -0.867 100.972 96.521 1.00 63.18 C
ATOM 24 P C B 582 -0.744 107.007 97.037 1.00 50.32 P
ATOM 25 OP1 C B 582 -0.134 108.348 96.838 1.00 49.25 O
ATOM 26 OP2 C B 582 -2.049 106.907 97.726 1.00 50.79 O
ATOM 27 O5' C B 582 -0.882 106.305 95.616 1.00 47.13 O
TER
Atoms:
OP1: (-6.240,104.298,104.541)
OP2: (-7.612,102.193,104.004)
C3': (-2.935,101.366,102.441)
C1': (-2.823,99.207,103.423)
C5': (-3.828,102.432,104.567)
O6: (-7.101,95.441,101.640)
O4': (-3.062,100.151,104.456)
C8: (-5.345,98.914,103.371)
C2: (-3.552,95.280,101.750)
C6: (-5.946,95.801,101.880)
C5: (-5.514,96.998,102.470)
C4: (-4.162,97.222,102.616)
P: (-6.443,102.833,104.661)
C4': (-2.823,101.492,103.953)
C2': (-2.355,99.980,102.184)
O2': (-0.949,99.981,102.111)
N1: (-4.876,94.979,101.545)
N2: (-2.658,94.334,101.384)
N3: (-3.135,96.417,102.283)
N7: (-6.247,98.068,102.960)
N9: (-4.058,98.474,103.164)
O5': (-5.150,102.079,104.119)
O3': (-2.136,102.339,101.776)
OP2: (-7.612,102.193,104.004)
C3': (-2.935,101.366,102.441)
C1': (-2.823,99.207,103.423)
C5': (-3.828,102.432,104.567)
O6: (-7.101,95.441,101.640)
O4': (-3.062,100.151,104.456)
C8: (-5.345,98.914,103.371)
C2: (-3.552,95.280,101.750)
C6: (-5.946,95.801,101.880)
C5: (-5.514,96.998,102.470)
C4: (-4.162,97.222,102.616)
P: (-6.443,102.833,104.661)
C4': (-2.823,101.492,103.953)
C2': (-2.355,99.980,102.184)
O2': (-0.949,99.981,102.111)
N1: (-4.876,94.979,101.545)
N2: (-2.658,94.334,101.384)
N3: (-3.135,96.417,102.283)
N7: (-6.247,98.068,102.960)
N9: (-4.058,98.474,103.164)
O5': (-5.150,102.079,104.119)
O3': (-2.136,102.339,101.776)
OP1: (-2.619,104.657,102.569)
OP2: (-4.072,103.612,100.725)
C3': (-0.002,104.707,98.056)
C1': (0.669,102.447,97.918)
C5': (-0.358,104.593,100.581)
O4': (0.678,102.820,99.286)
C8: (-1.501,101.305,98.594)
O2': (2.020,104.097,96.831)
C6: (-2.659,99.613,95.731)
C5: (-2.065,100.333,96.789)
C4: (-0.867,100.972,96.521)
P: (-2.750,103.772,101.377)
C4': (0.531,104.258,99.404)
C2': (0.681,103.741,97.098)
C2: (-0.860,100.264,94.436)
N1: (-2.016,99.598,94.543)
N3: (-0.204,100.975,95.354)
N6: (-3.813,98.950,95.840)
N7: (-2.451,100.547,98.105)
N9: (-0.512,101.609,97.688)
O5': (-1.736,104.292,100.264)
O3': (0.312,106.073,97.808)
OP2: (-4.072,103.612,100.725)
C3': (-0.002,104.707,98.056)
C1': (0.669,102.447,97.918)
C5': (-0.358,104.593,100.581)
O4': (0.678,102.820,99.286)
C8: (-1.501,101.305,98.594)
O2': (2.020,104.097,96.831)
C6: (-2.659,99.613,95.731)
C5: (-2.065,100.333,96.789)
C4: (-0.867,100.972,96.521)
P: (-2.750,103.772,101.377)
C4': (0.531,104.258,99.404)
C2': (0.681,103.741,97.098)
C2: (-0.860,100.264,94.436)
N1: (-2.016,99.598,94.543)
N3: (-0.204,100.975,95.354)
N6: (-3.813,98.950,95.840)
N7: (-2.451,100.547,98.105)
N9: (-0.512,101.609,97.688)
O5': (-1.736,104.292,100.264)
O3': (0.312,106.073,97.808)
Image (generated by PyMOL):