Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQP:0580:0581
Extra
PDB:
ATOM 1 O3' A A 579 -6.536 102.348 106.196 1.00 55.94 O
ATOM 2 P G A 580 -6.483 102.686 104.626 1.00 54.02 P
ATOM 3 OP1 G A 580 -6.280 104.147 104.517 1.00 54.70 O
ATOM 4 OP2 G A 580 -7.649 102.047 103.960 1.00 55.57 O
ATOM 5 O5' G A 580 -5.180 101.931 104.103 1.00 54.66 O
ATOM 6 C5' G A 580 -3.864 102.244 104.613 1.00 50.37 C
ATOM 7 C4' G A 580 -2.850 101.308 104.005 1.00 49.90 C
ATOM 8 O4' G A 580 -3.098 99.958 104.474 1.00 48.81 O
ATOM 9 C3' G A 580 -2.927 101.211 102.489 1.00 49.89 C
ATOM 10 O3' G A 580 -2.116 102.202 101.875 1.00 51.91 O
ATOM 11 C2' G A 580 -2.355 99.827 102.211 1.00 48.84 C
ATOM 12 O2' G A 580 -0.947 99.810 102.157 1.00 52.11 O
ATOM 13 C1' G A 580 -2.847 99.034 103.427 1.00 47.74 C
ATOM 14 N9 G A 580 -4.078 98.306 103.146 1.00 46.46 N
ATOM 15 C8 G A 580 -5.367 98.746 103.345 1.00 46.31 C
ATOM 16 N7 G A 580 -6.266 97.893 102.940 1.00 46.72 N
ATOM 17 C5 G A 580 -5.529 96.821 102.460 1.00 44.85 C
ATOM 18 C6 G A 580 -5.956 95.614 101.883 1.00 43.89 C
ATOM 19 O6 G A 580 -7.108 95.239 101.664 1.00 47.29 O
ATOM 20 N1 G A 580 -4.883 94.803 101.537 1.00 43.69 N
ATOM 21 C2 G A 580 -3.560 95.120 101.725 1.00 44.99 C
ATOM 22 N2 G A 580 -2.662 94.193 101.344 1.00 44.41 N
ATOM 23 N3 G A 580 -3.147 96.256 102.253 1.00 43.82 N
ATOM 24 C4 G A 580 -4.178 97.054 102.595 1.00 44.93 C
ATOM 25 P A A 581 -2.754 103.596 101.399 1.00 53.82 P
ATOM 26 OP1 A A 581 -2.632 104.554 102.531 1.00 52.01 O
ATOM 27 OP2 A A 581 -4.075 103.375 100.768 1.00 53.45 O
ATOM 28 O5' A A 581 -1.743 104.063 100.261 1.00 55.02 O
TER
ATOM 1 O3' G B 580 -2.116 102.202 101.875 1.00 51.91 O
ATOM 2 P A B 581 -2.754 103.596 101.399 1.00 53.82 P
ATOM 3 OP1 A B 581 -2.632 104.554 102.531 1.00 52.01 O
ATOM 4 OP2 A B 581 -4.075 103.375 100.768 1.00 53.45 O
ATOM 5 O5' A B 581 -1.743 104.063 100.261 1.00 55.02 O
ATOM 6 C5' A B 581 -0.376 104.402 100.574 1.00 52.32 C
ATOM 7 C4' A B 581 0.517 104.066 99.407 1.00 52.42 C
ATOM 8 O4' A B 581 0.647 102.627 99.287 1.00 52.74 O
ATOM 9 C3' A B 581 -0.008 104.519 98.055 1.00 51.30 C
ATOM 10 O3' A B 581 0.309 105.887 97.812 1.00 48.72 O
ATOM 11 C2' A B 581 0.691 103.557 97.107 1.00 52.70 C
ATOM 12 O2' A B 581 2.036 103.925 96.894 1.00 54.71 O
ATOM 13 C1' A B 581 0.650 102.258 97.917 1.00 55.01 C
ATOM 14 N9 A B 581 -0.552 101.457 97.667 1.00 59.19 N
ATOM 15 C8 A B 581 -1.616 101.265 98.517 1.00 60.71 C
ATOM 16 N7 A B 581 -2.569 100.523 98.012 1.00 62.03 N
ATOM 17 C5 A B 581 -2.104 100.197 96.746 1.00 62.54 C
ATOM 18 C6 A B 581 -2.659 99.436 95.702 1.00 63.10 C
ATOM 19 N6 A B 581 -3.850 98.838 95.772 1.00 63.31 N
ATOM 20 N1 A B 581 -1.939 99.308 94.567 1.00 63.99 N
ATOM 21 C2 A B 581 -0.744 99.904 94.499 1.00 64.00 C
ATOM 22 N3 A B 581 -0.115 100.642 95.412 1.00 63.18 N
ATOM 23 C4 A B 581 -0.858 100.756 96.524 1.00 61.11 C
ATOM 24 P C B 582 -0.728 106.817 97.009 1.00 47.06 P
ATOM 25 OP1 C B 582 -0.114 108.146 96.811 1.00 46.25 O
ATOM 26 OP2 C B 582 -2.049 106.729 97.669 1.00 49.48 O
ATOM 27 O5' C B 582 -0.862 106.095 95.600 1.00 45.51 O
TER
ATOM 2 P G A 580 -6.483 102.686 104.626 1.00 54.02 P
ATOM 3 OP1 G A 580 -6.280 104.147 104.517 1.00 54.70 O
ATOM 4 OP2 G A 580 -7.649 102.047 103.960 1.00 55.57 O
ATOM 5 O5' G A 580 -5.180 101.931 104.103 1.00 54.66 O
ATOM 6 C5' G A 580 -3.864 102.244 104.613 1.00 50.37 C
ATOM 7 C4' G A 580 -2.850 101.308 104.005 1.00 49.90 C
ATOM 8 O4' G A 580 -3.098 99.958 104.474 1.00 48.81 O
ATOM 9 C3' G A 580 -2.927 101.211 102.489 1.00 49.89 C
ATOM 10 O3' G A 580 -2.116 102.202 101.875 1.00 51.91 O
ATOM 11 C2' G A 580 -2.355 99.827 102.211 1.00 48.84 C
ATOM 12 O2' G A 580 -0.947 99.810 102.157 1.00 52.11 O
ATOM 13 C1' G A 580 -2.847 99.034 103.427 1.00 47.74 C
ATOM 14 N9 G A 580 -4.078 98.306 103.146 1.00 46.46 N
ATOM 15 C8 G A 580 -5.367 98.746 103.345 1.00 46.31 C
ATOM 16 N7 G A 580 -6.266 97.893 102.940 1.00 46.72 N
ATOM 17 C5 G A 580 -5.529 96.821 102.460 1.00 44.85 C
ATOM 18 C6 G A 580 -5.956 95.614 101.883 1.00 43.89 C
ATOM 19 O6 G A 580 -7.108 95.239 101.664 1.00 47.29 O
ATOM 20 N1 G A 580 -4.883 94.803 101.537 1.00 43.69 N
ATOM 21 C2 G A 580 -3.560 95.120 101.725 1.00 44.99 C
ATOM 22 N2 G A 580 -2.662 94.193 101.344 1.00 44.41 N
ATOM 23 N3 G A 580 -3.147 96.256 102.253 1.00 43.82 N
ATOM 24 C4 G A 580 -4.178 97.054 102.595 1.00 44.93 C
ATOM 25 P A A 581 -2.754 103.596 101.399 1.00 53.82 P
ATOM 26 OP1 A A 581 -2.632 104.554 102.531 1.00 52.01 O
ATOM 27 OP2 A A 581 -4.075 103.375 100.768 1.00 53.45 O
ATOM 28 O5' A A 581 -1.743 104.063 100.261 1.00 55.02 O
TER
ATOM 1 O3' G B 580 -2.116 102.202 101.875 1.00 51.91 O
ATOM 2 P A B 581 -2.754 103.596 101.399 1.00 53.82 P
ATOM 3 OP1 A B 581 -2.632 104.554 102.531 1.00 52.01 O
ATOM 4 OP2 A B 581 -4.075 103.375 100.768 1.00 53.45 O
ATOM 5 O5' A B 581 -1.743 104.063 100.261 1.00 55.02 O
ATOM 6 C5' A B 581 -0.376 104.402 100.574 1.00 52.32 C
ATOM 7 C4' A B 581 0.517 104.066 99.407 1.00 52.42 C
ATOM 8 O4' A B 581 0.647 102.627 99.287 1.00 52.74 O
ATOM 9 C3' A B 581 -0.008 104.519 98.055 1.00 51.30 C
ATOM 10 O3' A B 581 0.309 105.887 97.812 1.00 48.72 O
ATOM 11 C2' A B 581 0.691 103.557 97.107 1.00 52.70 C
ATOM 12 O2' A B 581 2.036 103.925 96.894 1.00 54.71 O
ATOM 13 C1' A B 581 0.650 102.258 97.917 1.00 55.01 C
ATOM 14 N9 A B 581 -0.552 101.457 97.667 1.00 59.19 N
ATOM 15 C8 A B 581 -1.616 101.265 98.517 1.00 60.71 C
ATOM 16 N7 A B 581 -2.569 100.523 98.012 1.00 62.03 N
ATOM 17 C5 A B 581 -2.104 100.197 96.746 1.00 62.54 C
ATOM 18 C6 A B 581 -2.659 99.436 95.702 1.00 63.10 C
ATOM 19 N6 A B 581 -3.850 98.838 95.772 1.00 63.31 N
ATOM 20 N1 A B 581 -1.939 99.308 94.567 1.00 63.99 N
ATOM 21 C2 A B 581 -0.744 99.904 94.499 1.00 64.00 C
ATOM 22 N3 A B 581 -0.115 100.642 95.412 1.00 63.18 N
ATOM 23 C4 A B 581 -0.858 100.756 96.524 1.00 61.11 C
ATOM 24 P C B 582 -0.728 106.817 97.009 1.00 47.06 P
ATOM 25 OP1 C B 582 -0.114 108.146 96.811 1.00 46.25 O
ATOM 26 OP2 C B 582 -2.049 106.729 97.669 1.00 49.48 O
ATOM 27 O5' C B 582 -0.862 106.095 95.600 1.00 45.51 O
TER
Atoms:
OP1: (-6.280,104.147,104.517)
OP2: (-7.649,102.047,103.960)
C3': (-2.927,101.211,102.489)
C1': (-2.847,99.034,103.427)
C5': (-3.864,102.244,104.613)
O6: (-7.108,95.239,101.664)
O4': (-3.098,99.958,104.474)
C8: (-5.367,98.746,103.345)
C2: (-3.560,95.120,101.725)
C6: (-5.956,95.614,101.883)
C5: (-5.529,96.821,102.460)
C4: (-4.178,97.054,102.595)
P: (-6.483,102.686,104.626)
C4': (-2.850,101.308,104.005)
C2': (-2.355,99.827,102.211)
O2': (-0.947,99.810,102.157)
N1: (-4.883,94.803,101.537)
N2: (-2.662,94.193,101.344)
N3: (-3.147,96.256,102.253)
N7: (-6.266,97.893,102.940)
N9: (-4.078,98.306,103.146)
O5': (-5.180,101.931,104.103)
O3': (-2.116,102.202,101.875)
OP2: (-7.649,102.047,103.960)
C3': (-2.927,101.211,102.489)
C1': (-2.847,99.034,103.427)
C5': (-3.864,102.244,104.613)
O6: (-7.108,95.239,101.664)
O4': (-3.098,99.958,104.474)
C8: (-5.367,98.746,103.345)
C2: (-3.560,95.120,101.725)
C6: (-5.956,95.614,101.883)
C5: (-5.529,96.821,102.460)
C4: (-4.178,97.054,102.595)
P: (-6.483,102.686,104.626)
C4': (-2.850,101.308,104.005)
C2': (-2.355,99.827,102.211)
O2': (-0.947,99.810,102.157)
N1: (-4.883,94.803,101.537)
N2: (-2.662,94.193,101.344)
N3: (-3.147,96.256,102.253)
N7: (-6.266,97.893,102.940)
N9: (-4.078,98.306,103.146)
O5': (-5.180,101.931,104.103)
O3': (-2.116,102.202,101.875)
OP1: (-2.632,104.554,102.531)
OP2: (-4.075,103.375,100.768)
C3': (-0.008,104.519,98.055)
C1': (0.650,102.258,97.917)
C5': (-0.376,104.402,100.574)
O4': (0.647,102.627,99.287)
C8: (-1.616,101.265,98.517)
O2': (2.036,103.925,96.894)
C6: (-2.659,99.436,95.702)
C5: (-2.104,100.197,96.746)
C4: (-0.858,100.756,96.524)
P: (-2.754,103.596,101.399)
C4': (0.517,104.066,99.407)
C2': (0.691,103.557,97.107)
C2: (-0.744,99.904,94.499)
N1: (-1.939,99.308,94.567)
N3: (-0.115,100.642,95.412)
N6: (-3.850,98.838,95.772)
N7: (-2.569,100.523,98.012)
N9: (-0.552,101.457,97.667)
O5': (-1.743,104.063,100.261)
O3': (0.309,105.887,97.812)
OP2: (-4.075,103.375,100.768)
C3': (-0.008,104.519,98.055)
C1': (0.650,102.258,97.917)
C5': (-0.376,104.402,100.574)
O4': (0.647,102.627,99.287)
C8: (-1.616,101.265,98.517)
O2': (2.036,103.925,96.894)
C6: (-2.659,99.436,95.702)
C5: (-2.104,100.197,96.746)
C4: (-0.858,100.756,96.524)
P: (-2.754,103.596,101.399)
C4': (0.517,104.066,99.407)
C2': (0.691,103.557,97.107)
C2: (-0.744,99.904,94.499)
N1: (-1.939,99.308,94.567)
N3: (-0.115,100.642,95.412)
N6: (-3.850,98.838,95.772)
N7: (-2.569,100.523,98.012)
N9: (-0.552,101.457,97.667)
O5': (-1.743,104.063,100.261)
O3': (0.309,105.887,97.812)
Image (generated by PyMOL):