ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2NOK:D6:C16

Extra

PDB:
ATOM 1 O3' U A 5 -18.237 57.350 -18.338 1.00100.00 O
ATOM 2 P C A 6 -17.463 56.901 -16.993 1.00100.00 P
ATOM 3 OP1 C A 6 -16.171 57.652 -16.979 1.00100.00 O
ATOM 4 OP2 C A 6 -17.457 55.401 -16.956 1.00100.00 O
ATOM 5 O5' C A 6 -18.360 57.452 -15.779 1.00100.00 O
ATOM 6 C5' C A 6 -18.612 58.837 -15.573 1.00100.00 C
ATOM 7 C4' C A 6 -19.624 58.945 -14.458 1.00100.00 C
ATOM 8 O4' C A 6 -20.894 58.409 -14.904 1.00100.00 O
ATOM 9 C3' C A 6 -19.261 58.024 -13.315 1.00100.00 C
ATOM 10 O3' C A 6 -18.323 58.626 -12.448 1.00100.00 O
ATOM 11 C2' C A 6 -20.586 57.672 -12.644 1.00100.00 C
ATOM 12 O2' C A 6 -20.974 58.507 -11.577 1.00100.00 O
ATOM 13 C1' C A 6 -21.564 57.783 -13.808 1.00100.00 C
ATOM 14 N1 C A 6 -22.123 56.411 -14.148 1.00100.00 N
ATOM 15 C2 C A 6 -21.769 55.693 -15.314 1.00100.00 C
ATOM 16 O2 C A 6 -20.979 56.175 -16.133 1.00100.00 O
ATOM 17 N3 C A 6 -22.322 54.462 -15.532 1.00100.00 N
ATOM 18 C4 C A 6 -23.182 53.932 -14.650 1.00100.00 C
ATOM 19 N4 C A 6 -23.695 52.724 -14.914 1.00100.00 N
ATOM 20 C5 C A 6 -23.550 54.632 -13.460 1.00100.00 C
ATOM 21 C6 C A 6 -23.006 55.843 -13.257 1.00100.00 C
ATOM 22 P G A 7 -17.131 57.673 -11.917 1.00100.00 P
ATOM 23 OP1 G A 7 -15.906 58.502 -11.676 1.00100.00 O
ATOM 24 OP2 G A 7 -17.052 56.544 -12.889 1.00100.00 O
ATOM 25 O5' G A 7 -17.710 57.144 -10.508 1.00100.00 O
TER

ATOM 1 O3' C B 15 -30.979 49.130 -9.557 1.00 93.00 O
ATOM 2 P U B 16 -31.522 50.380 -10.389 1.00 92.80 P
ATOM 3 OP1 U B 16 -32.828 50.682 -9.779 1.00 95.25 O
ATOM 4 OP2 U B 16 -31.438 50.139 -11.841 1.00 91.25 O
ATOM 5 O5' U B 16 -30.511 51.547 -9.995 1.00 93.59 O
ATOM 6 C5' U B 16 -30.610 52.094 -8.684 1.00 95.32 C
ATOM 7 C4' U B 16 -29.474 53.056 -8.476 1.00 96.93 C
ATOM 8 O4' U B 16 -28.286 52.315 -8.780 1.00 97.03 O
ATOM 9 C3' U B 16 -29.424 54.218 -9.455 1.00 99.02 C
ATOM 10 O3' U B 16 -30.229 55.327 -9.012 1.00100.00 O
ATOM 11 C2' U B 16 -27.930 54.535 -9.481 1.00 98.55 C
ATOM 12 O2' U B 16 -27.451 55.235 -8.348 1.00 99.02 O
ATOM 13 C1' U B 16 -27.359 53.125 -9.477 1.00 97.12 C
ATOM 14 N1 U B 16 -27.068 52.580 -10.862 1.00 96.68 N
ATOM 15 C2 U B 16 -25.865 52.918 -11.480 1.00 96.16 C
ATOM 16 O2 U B 16 -25.016 53.639 -10.982 1.00 96.37 O
ATOM 17 N3 U B 16 -25.683 52.384 -12.730 1.00 95.20 N
ATOM 18 C4 U B 16 -26.554 51.570 -13.416 1.00 95.77 C
ATOM 19 O4 U B 16 -26.245 51.180 -14.525 1.00 96.09 O
ATOM 20 C5 U B 16 -27.778 51.252 -12.728 1.00 96.51 C
ATOM 21 C6 U B 16 -27.985 51.758 -11.502 1.00 96.66 C
ATOM 22 P U B 17 -31.038 56.259 -10.045 1.00100.00 P
ATOM 23 OP1 U B 17 -31.828 57.198 -9.215 1.00100.00 O
ATOM 24 OP2 U B 17 -31.741 55.379 -11.018 1.00100.00 O
ATOM 25 O5' U B 17 -29.861 57.121 -10.735 1.00100.00 O
TER

Atoms:
C2: (-21.769,55.693,-15.314)
OP1: (-16.171,57.652,-16.979)
OP2: (-17.457,55.401,-16.956)
C4: (-23.182,53.932,-14.650)
O5': (-18.360,57.452,-15.779)
C3': (-19.261,58.024,-13.315)
C1': (-21.564,57.783,-13.808)
O4': (-20.894,58.409,-14.904)
C5': (-18.612,58.837,-15.573)
P: (-17.463,56.901,-16.993)
O2: (-20.979,56.175,-16.133)
C4': (-19.624,58.945,-14.458)
C2': (-20.586,57.672,-12.644)
O2': (-20.974,58.507,-11.577)
N1: (-22.123,56.411,-14.148)
N3: (-22.322,54.462,-15.532)
N4: (-23.695,52.724,-14.914)
C6: (-23.006,55.843,-13.257)
C5: (-23.550,54.632,-13.460)
O3': (-18.323,58.626,-12.448)
C4: (-26.554,51.570,-13.416)
N3: (-25.683,52.384,-12.730)
OP1: (-32.828,50.682,-9.779)
OP2: (-31.438,50.139,-11.841)
C2: (-25.865,52.918,-11.480)
C1': (-27.359,53.125,-9.477)
C3': (-29.424,54.218,-9.455)
O5': (-30.511,51.547,-9.995)
O4': (-28.286,52.315,-8.780)
C5': (-30.610,52.094,-8.684)
P: (-31.522,50.380,-10.389)
C4': (-29.474,53.056,-8.476)
C2': (-27.930,54.535,-9.481)
O2': (-27.451,55.235,-8.348)
N1: (-27.068,52.580,-10.862)
O4: (-26.245,51.180,-14.525)
O2: (-25.016,53.639,-10.982)
C6: (-27.985,51.758,-11.502)
C5: (-27.778,51.252,-12.728)
O3': (-30.229,55.327,-9.012)
Image (generated by PyMOL):
PyMOL image
show in jmol