ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CC7:0580:0581

Extra

PDB:
ATOM 1 O3' A A 579 -6.072 103.542 106.693 1.00 55.99 O
ATOM 2 P G A 580 -6.116 104.011 105.155 1.00 57.35 P
ATOM 3 OP1 G A 580 -5.886 105.483 105.167 1.00 56.17 O
ATOM 4 OP2 G A 580 -7.328 103.457 104.484 1.00 55.65 O
ATOM 5 O5' G A 580 -4.862 103.289 104.490 1.00 56.39 O
ATOM 6 C5' G A 580 -3.518 103.706 104.785 1.00 53.46 C
ATOM 7 C4' G A 580 -2.540 102.722 104.202 1.00 51.52 C
ATOM 8 O4' G A 580 -2.802 101.420 104.780 1.00 51.77 O
ATOM 9 C3' G A 580 -2.660 102.494 102.704 1.00 50.10 C
ATOM 10 O3' G A 580 -1.896 103.438 101.977 1.00 50.16 O
ATOM 11 C2' G A 580 -2.053 101.107 102.547 1.00 51.61 C
ATOM 12 O2' G A 580 -0.638 101.108 102.553 1.00 53.39 O
ATOM 13 C1' G A 580 -2.561 100.414 103.812 1.00 51.65 C
ATOM 14 N9 G A 580 -3.813 99.719 103.554 1.00 50.77 N
ATOM 15 C8 G A 580 -5.085 100.176 103.796 1.00 51.63 C
ATOM 16 N7 G A 580 -6.007 99.343 103.402 1.00 51.44 N
ATOM 17 C5 G A 580 -5.298 98.272 102.881 1.00 50.36 C
ATOM 18 C6 G A 580 -5.756 97.073 102.299 1.00 50.65 C
ATOM 19 O6 G A 580 -6.923 96.706 102.116 1.00 53.35 O
ATOM 20 N1 G A 580 -4.698 96.258 101.907 1.00 50.79 N
ATOM 21 C2 G A 580 -3.368 96.564 102.059 1.00 51.06 C
ATOM 22 N2 G A 580 -2.491 95.648 101.629 1.00 49.64 N
ATOM 23 N3 G A 580 -2.931 97.687 102.597 1.00 50.61 N
ATOM 24 C4 G A 580 -3.943 98.486 102.983 1.00 50.19 C
ATOM 25 P A A 581 -2.549 104.833 101.532 1.00 52.57 P
ATOM 26 OP1 A A 581 -2.498 105.757 102.701 1.00 48.55 O
ATOM 27 OP2 A A 581 -3.846 104.560 100.859 1.00 51.75 O
ATOM 28 O5' A A 581 -1.531 105.382 100.439 1.00 52.26 O
TER

ATOM 1 O3' G B 580 -1.896 103.438 101.977 1.00 50.16 O
ATOM 2 P A B 581 -2.549 104.833 101.532 1.00 52.57 P
ATOM 3 OP1 A B 581 -2.498 105.757 102.701 1.00 48.55 O
ATOM 4 OP2 A B 581 -3.846 104.560 100.859 1.00 51.75 O
ATOM 5 O5' A B 581 -1.531 105.382 100.439 1.00 52.26 O
ATOM 6 C5' A B 581 -0.179 105.739 100.793 1.00 50.86 C
ATOM 7 C4' A B 581 0.766 105.349 99.684 1.00 51.09 C
ATOM 8 O4' A B 581 0.893 103.905 99.629 1.00 52.99 O
ATOM 9 C3' A B 581 0.291 105.744 98.300 1.00 50.11 C
ATOM 10 O3' A B 581 0.632 107.090 98.021 1.00 46.42 O
ATOM 11 C2' A B 581 1.001 104.736 97.414 1.00 52.58 C
ATOM 12 O2' A B 581 2.354 105.080 97.221 1.00 54.46 O
ATOM 13 C1' A B 581 0.927 103.476 98.280 1.00 55.29 C
ATOM 14 N9 A B 581 -0.284 102.691 98.053 1.00 60.86 N
ATOM 15 C8 A B 581 -1.322 102.530 98.935 1.00 63.47 C
ATOM 16 N7 A B 581 -2.304 101.800 98.469 1.00 65.96 N
ATOM 17 C5 A B 581 -1.885 101.453 97.195 1.00 65.28 C
ATOM 18 C6 A B 581 -2.492 100.704 96.179 1.00 66.48 C
ATOM 19 N6 A B 581 -3.703 100.157 96.293 1.00 68.02 N
ATOM 20 N1 A B 581 -1.812 100.540 95.026 1.00 66.36 N
ATOM 21 C2 A B 581 -0.605 101.106 94.913 1.00 67.55 C
ATOM 22 N3 A B 581 0.069 101.845 95.797 1.00 66.74 N
ATOM 23 C4 A B 581 -0.635 101.983 96.930 1.00 64.17 C
ATOM 24 P C B 582 -0.465 108.063 97.370 1.00 45.45 P
ATOM 25 OP1 C B 582 0.118 109.426 97.239 1.00 43.44 O
ATOM 26 OP2 C B 582 -1.737 107.886 98.103 1.00 46.15 O
ATOM 27 O5' C B 582 -0.652 107.446 95.918 1.00 44.13 O
TER

Atoms:
OP1: (-5.886,105.483,105.167)
OP2: (-7.328,103.457,104.484)
C3': (-2.660,102.494,102.704)
C1': (-2.561,100.414,103.812)
C5': (-3.518,103.706,104.785)
O6: (-6.923,96.706,102.116)
O4': (-2.802,101.420,104.780)
C8: (-5.085,100.176,103.796)
C2: (-3.368,96.564,102.059)
C6: (-5.756,97.073,102.299)
C5: (-5.298,98.272,102.881)
C4: (-3.943,98.486,102.983)
P: (-6.116,104.011,105.155)
C4': (-2.540,102.722,104.202)
C2': (-2.053,101.107,102.547)
O2': (-0.638,101.108,102.553)
N1: (-4.698,96.258,101.907)
N2: (-2.491,95.648,101.629)
N3: (-2.931,97.687,102.597)
N7: (-6.007,99.343,103.402)
N9: (-3.813,99.719,103.554)
O5': (-4.862,103.289,104.490)
O3': (-1.896,103.438,101.977)
OP1: (-2.498,105.757,102.701)
OP2: (-3.846,104.560,100.859)
C3': (0.291,105.744,98.300)
C1': (0.927,103.476,98.280)
C5': (-0.179,105.739,100.793)
O4': (0.893,103.905,99.629)
C8: (-1.322,102.530,98.935)
O2': (2.354,105.080,97.221)
C6: (-2.492,100.704,96.179)
C5: (-1.885,101.453,97.195)
C4: (-0.635,101.983,96.930)
P: (-2.549,104.833,101.532)
C4': (0.766,105.349,99.684)
C2': (1.001,104.736,97.414)
C2: (-0.605,101.106,94.913)
N1: (-1.812,100.540,95.026)
N3: (0.069,101.845,95.797)
N6: (-3.703,100.157,96.293)
N7: (-2.304,101.800,98.469)
N9: (-0.284,102.691,98.053)
O5': (-1.531,105.382,100.439)
O3': (0.632,107.090,98.021)
Image (generated by PyMOL):
PyMOL image
show in jmol