Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CCS:0580:0581
Extra
PDB:
ATOM 1 O3' A A 579 -6.461 103.198 106.439 1.00 69.07 O
ATOM 2 P G A 580 -6.270 103.656 104.909 1.00 69.77 P
ATOM 3 OP1 G A 580 -5.879 105.091 104.938 1.00 67.58 O
ATOM 4 OP2 G A 580 -7.465 103.234 104.130 1.00 68.60 O
ATOM 5 O5' G A 580 -5.055 102.763 104.389 1.00 68.38 O
ATOM 6 C5' G A 580 -3.690 103.143 104.628 1.00 66.76 C
ATOM 7 C4' G A 580 -2.759 102.156 103.972 1.00 66.20 C
ATOM 8 O4' G A 580 -3.054 100.838 104.494 1.00 67.22 O
ATOM 9 C3' G A 580 -2.906 101.995 102.466 1.00 65.37 C
ATOM 10 O3' G A 580 -2.124 102.941 101.762 1.00 65.38 O
ATOM 11 C2' G A 580 -2.339 100.603 102.236 1.00 65.84 C
ATOM 12 O2' G A 580 -0.929 100.580 102.193 1.00 65.77 O
ATOM 13 C1' G A 580 -2.829 99.867 103.485 1.00 67.00 C
ATOM 14 N9 G A 580 -4.083 99.177 103.221 1.00 67.01 N
ATOM 15 C8 G A 580 -5.355 99.634 103.468 1.00 67.46 C
ATOM 16 N7 G A 580 -6.278 98.810 103.059 1.00 67.84 N
ATOM 17 C5 G A 580 -5.572 97.744 102.522 1.00 66.16 C
ATOM 18 C6 G A 580 -6.031 96.560 101.921 1.00 66.05 C
ATOM 19 O6 G A 580 -7.197 96.200 101.728 1.00 68.77 O
ATOM 20 N1 G A 580 -4.977 95.746 101.523 1.00 65.51 N
ATOM 21 C2 G A 580 -3.650 96.034 101.688 1.00 64.77 C
ATOM 22 N2 G A 580 -2.782 95.107 101.252 1.00 63.15 N
ATOM 23 N3 G A 580 -3.207 97.143 102.243 1.00 65.23 N
ATOM 24 C4 G A 580 -4.217 97.948 102.633 1.00 65.90 C
ATOM 25 P A A 581 -2.759 104.349 101.330 1.00 67.21 P
ATOM 26 OP1 A A 581 -2.656 105.239 102.514 1.00 65.24 O
ATOM 27 OP2 A A 581 -4.080 104.128 100.687 1.00 66.66 O
ATOM 28 O5' A A 581 -1.762 104.876 100.207 1.00 67.00 O
TER
ATOM 1 O3' G B 580 -2.124 102.941 101.762 1.00 65.38 O
ATOM 2 P A B 581 -2.759 104.349 101.330 1.00 67.21 P
ATOM 3 OP1 A B 581 -2.656 105.239 102.514 1.00 65.24 O
ATOM 4 OP2 A B 581 -4.080 104.128 100.687 1.00 66.66 O
ATOM 5 O5' A B 581 -1.762 104.876 100.207 1.00 67.00 O
ATOM 6 C5' A B 581 -0.395 105.202 100.516 1.00 65.80 C
ATOM 7 C4' A B 581 0.504 104.787 99.378 1.00 65.07 C
ATOM 8 O4' A B 581 0.583 103.344 99.321 1.00 67.04 O
ATOM 9 C3' A B 581 0.027 105.194 97.998 1.00 63.67 C
ATOM 10 O3' A B 581 0.399 106.534 97.713 1.00 58.41 O
ATOM 11 C2' A B 581 0.734 104.187 97.106 1.00 66.56 C
ATOM 12 O2' A B 581 2.084 104.538 96.901 1.00 68.18 O
ATOM 13 C1' A B 581 0.687 102.925 97.973 1.00 69.81 C
ATOM 14 N9 A B 581 -0.435 102.029 97.695 1.00 75.74 N
ATOM 15 C8 A B 581 -1.287 101.463 98.610 1.00 78.26 C
ATOM 16 N7 A B 581 -2.209 100.700 98.075 1.00 80.31 N
ATOM 17 C5 A B 581 -1.950 100.770 96.716 1.00 80.66 C
ATOM 18 C6 A B 581 -2.583 100.191 95.603 1.00 82.34 C
ATOM 19 N6 A B 581 -3.655 99.401 95.687 1.00 84.57 N
ATOM 20 N1 A B 581 -2.074 100.455 94.384 1.00 83.13 N
ATOM 21 C2 A B 581 -1.004 101.252 94.298 1.00 83.51 C
ATOM 22 N3 A B 581 -0.324 101.862 95.269 1.00 82.02 N
ATOM 23 C4 A B 581 -0.855 101.578 96.467 1.00 79.50 C
ATOM 24 P C B 582 -0.650 107.512 96.999 1.00 57.53 P
ATOM 25 OP1 C B 582 -0.021 108.835 96.818 1.00 58.80 O
ATOM 26 OP2 C B 582 -1.930 107.421 97.724 1.00 60.38 O
ATOM 27 O5' C B 582 -0.834 106.859 95.563 1.00 56.24 O
TER
ATOM 2 P G A 580 -6.270 103.656 104.909 1.00 69.77 P
ATOM 3 OP1 G A 580 -5.879 105.091 104.938 1.00 67.58 O
ATOM 4 OP2 G A 580 -7.465 103.234 104.130 1.00 68.60 O
ATOM 5 O5' G A 580 -5.055 102.763 104.389 1.00 68.38 O
ATOM 6 C5' G A 580 -3.690 103.143 104.628 1.00 66.76 C
ATOM 7 C4' G A 580 -2.759 102.156 103.972 1.00 66.20 C
ATOM 8 O4' G A 580 -3.054 100.838 104.494 1.00 67.22 O
ATOM 9 C3' G A 580 -2.906 101.995 102.466 1.00 65.37 C
ATOM 10 O3' G A 580 -2.124 102.941 101.762 1.00 65.38 O
ATOM 11 C2' G A 580 -2.339 100.603 102.236 1.00 65.84 C
ATOM 12 O2' G A 580 -0.929 100.580 102.193 1.00 65.77 O
ATOM 13 C1' G A 580 -2.829 99.867 103.485 1.00 67.00 C
ATOM 14 N9 G A 580 -4.083 99.177 103.221 1.00 67.01 N
ATOM 15 C8 G A 580 -5.355 99.634 103.468 1.00 67.46 C
ATOM 16 N7 G A 580 -6.278 98.810 103.059 1.00 67.84 N
ATOM 17 C5 G A 580 -5.572 97.744 102.522 1.00 66.16 C
ATOM 18 C6 G A 580 -6.031 96.560 101.921 1.00 66.05 C
ATOM 19 O6 G A 580 -7.197 96.200 101.728 1.00 68.77 O
ATOM 20 N1 G A 580 -4.977 95.746 101.523 1.00 65.51 N
ATOM 21 C2 G A 580 -3.650 96.034 101.688 1.00 64.77 C
ATOM 22 N2 G A 580 -2.782 95.107 101.252 1.00 63.15 N
ATOM 23 N3 G A 580 -3.207 97.143 102.243 1.00 65.23 N
ATOM 24 C4 G A 580 -4.217 97.948 102.633 1.00 65.90 C
ATOM 25 P A A 581 -2.759 104.349 101.330 1.00 67.21 P
ATOM 26 OP1 A A 581 -2.656 105.239 102.514 1.00 65.24 O
ATOM 27 OP2 A A 581 -4.080 104.128 100.687 1.00 66.66 O
ATOM 28 O5' A A 581 -1.762 104.876 100.207 1.00 67.00 O
TER
ATOM 1 O3' G B 580 -2.124 102.941 101.762 1.00 65.38 O
ATOM 2 P A B 581 -2.759 104.349 101.330 1.00 67.21 P
ATOM 3 OP1 A B 581 -2.656 105.239 102.514 1.00 65.24 O
ATOM 4 OP2 A B 581 -4.080 104.128 100.687 1.00 66.66 O
ATOM 5 O5' A B 581 -1.762 104.876 100.207 1.00 67.00 O
ATOM 6 C5' A B 581 -0.395 105.202 100.516 1.00 65.80 C
ATOM 7 C4' A B 581 0.504 104.787 99.378 1.00 65.07 C
ATOM 8 O4' A B 581 0.583 103.344 99.321 1.00 67.04 O
ATOM 9 C3' A B 581 0.027 105.194 97.998 1.00 63.67 C
ATOM 10 O3' A B 581 0.399 106.534 97.713 1.00 58.41 O
ATOM 11 C2' A B 581 0.734 104.187 97.106 1.00 66.56 C
ATOM 12 O2' A B 581 2.084 104.538 96.901 1.00 68.18 O
ATOM 13 C1' A B 581 0.687 102.925 97.973 1.00 69.81 C
ATOM 14 N9 A B 581 -0.435 102.029 97.695 1.00 75.74 N
ATOM 15 C8 A B 581 -1.287 101.463 98.610 1.00 78.26 C
ATOM 16 N7 A B 581 -2.209 100.700 98.075 1.00 80.31 N
ATOM 17 C5 A B 581 -1.950 100.770 96.716 1.00 80.66 C
ATOM 18 C6 A B 581 -2.583 100.191 95.603 1.00 82.34 C
ATOM 19 N6 A B 581 -3.655 99.401 95.687 1.00 84.57 N
ATOM 20 N1 A B 581 -2.074 100.455 94.384 1.00 83.13 N
ATOM 21 C2 A B 581 -1.004 101.252 94.298 1.00 83.51 C
ATOM 22 N3 A B 581 -0.324 101.862 95.269 1.00 82.02 N
ATOM 23 C4 A B 581 -0.855 101.578 96.467 1.00 79.50 C
ATOM 24 P C B 582 -0.650 107.512 96.999 1.00 57.53 P
ATOM 25 OP1 C B 582 -0.021 108.835 96.818 1.00 58.80 O
ATOM 26 OP2 C B 582 -1.930 107.421 97.724 1.00 60.38 O
ATOM 27 O5' C B 582 -0.834 106.859 95.563 1.00 56.24 O
TER
Atoms:
OP1: (-5.879,105.091,104.938)
OP2: (-7.465,103.234,104.130)
C3': (-2.906,101.995,102.466)
C1': (-2.829,99.867,103.485)
C5': (-3.690,103.143,104.628)
O6: (-7.197,96.200,101.728)
O4': (-3.054,100.838,104.494)
C8: (-5.355,99.634,103.468)
C2: (-3.650,96.034,101.688)
C6: (-6.031,96.560,101.921)
C5: (-5.572,97.744,102.522)
C4: (-4.217,97.948,102.633)
P: (-6.270,103.656,104.909)
C4': (-2.759,102.156,103.972)
C2': (-2.339,100.603,102.236)
O2': (-0.929,100.580,102.193)
N1: (-4.977,95.746,101.523)
N2: (-2.782,95.107,101.252)
N3: (-3.207,97.143,102.243)
N7: (-6.278,98.810,103.059)
N9: (-4.083,99.177,103.221)
O5': (-5.055,102.763,104.389)
O3': (-2.124,102.941,101.762)
OP2: (-7.465,103.234,104.130)
C3': (-2.906,101.995,102.466)
C1': (-2.829,99.867,103.485)
C5': (-3.690,103.143,104.628)
O6: (-7.197,96.200,101.728)
O4': (-3.054,100.838,104.494)
C8: (-5.355,99.634,103.468)
C2: (-3.650,96.034,101.688)
C6: (-6.031,96.560,101.921)
C5: (-5.572,97.744,102.522)
C4: (-4.217,97.948,102.633)
P: (-6.270,103.656,104.909)
C4': (-2.759,102.156,103.972)
C2': (-2.339,100.603,102.236)
O2': (-0.929,100.580,102.193)
N1: (-4.977,95.746,101.523)
N2: (-2.782,95.107,101.252)
N3: (-3.207,97.143,102.243)
N7: (-6.278,98.810,103.059)
N9: (-4.083,99.177,103.221)
O5': (-5.055,102.763,104.389)
O3': (-2.124,102.941,101.762)
OP1: (-2.656,105.239,102.514)
OP2: (-4.080,104.128,100.687)
C3': (0.027,105.194,97.998)
C1': (0.687,102.925,97.973)
C5': (-0.395,105.202,100.516)
O4': (0.583,103.344,99.321)
C8: (-1.287,101.463,98.610)
O2': (2.084,104.538,96.901)
C6: (-2.583,100.191,95.603)
C5: (-1.950,100.770,96.716)
C4: (-0.855,101.578,96.467)
P: (-2.759,104.349,101.330)
C4': (0.504,104.787,99.378)
C2': (0.734,104.187,97.106)
C2: (-1.004,101.252,94.298)
N1: (-2.074,100.455,94.384)
N3: (-0.324,101.862,95.269)
N6: (-3.655,99.401,95.687)
N7: (-2.209,100.700,98.075)
N9: (-0.435,102.029,97.695)
O5': (-1.762,104.876,100.207)
O3': (0.399,106.534,97.713)
OP2: (-4.080,104.128,100.687)
C3': (0.027,105.194,97.998)
C1': (0.687,102.925,97.973)
C5': (-0.395,105.202,100.516)
O4': (0.583,103.344,99.321)
C8: (-1.287,101.463,98.610)
O2': (2.084,104.538,96.901)
C6: (-2.583,100.191,95.603)
C5: (-1.950,100.770,96.716)
C4: (-0.855,101.578,96.467)
P: (-2.759,104.349,101.330)
C4': (0.504,104.787,99.378)
C2': (0.734,104.187,97.106)
C2: (-1.004,101.252,94.298)
N1: (-2.074,100.455,94.384)
N3: (-0.324,101.862,95.269)
N6: (-3.655,99.401,95.687)
N7: (-2.209,100.700,98.075)
N9: (-0.435,102.029,97.695)
O5': (-1.762,104.876,100.207)
O3': (0.399,106.534,97.713)
Image (generated by PyMOL):