Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2V:A30:A60
Extra
PDB:
ATOM 1 O3' G A 29 -12.541 17.191 -29.471 1.00 34.00 O
ATOM 2 P A A 30 -11.823 18.514 -30.001 1.00 35.85 P
ATOM 3 OP1 A A 30 -12.878 19.445 -30.455 1.00 40.07 O
ATOM 4 OP2 A A 30 -10.723 18.125 -30.912 1.00 35.19 O
ATOM 5 O5' A A 30 -11.176 19.119 -28.671 1.00 31.91 O
ATOM 6 C5' A A 30 -12.006 19.626 -27.642 1.00 35.01 C
ATOM 7 C4' A A 30 -11.241 20.698 -26.895 1.00 33.10 C
ATOM 8 O4' A A 30 -10.009 20.132 -26.378 1.00 27.06 O
ATOM 9 C3' A A 30 -10.826 21.883 -27.764 1.00 33.44 C
ATOM 10 O3' A A 30 -11.191 23.105 -27.143 1.00 39.60 O
ATOM 11 C2' A A 30 -9.309 21.749 -27.853 1.00 35.52 C
ATOM 12 O2' A A 30 -8.662 22.999 -27.983 1.00 33.27 O
ATOM 13 C1' A A 30 -9.023 21.131 -26.492 1.00 31.70 C
ATOM 14 N9 A A 30 -7.687 20.558 -26.365 1.00 31.49 N
ATOM 15 C8 A A 30 -6.862 20.154 -27.377 1.00 31.43 C
ATOM 16 N7 A A 30 -5.709 19.685 -26.962 1.00 32.82 N
ATOM 17 C5 A A 30 -5.782 19.788 -25.583 1.00 32.07 C
ATOM 18 C6 A A 30 -4.874 19.455 -24.556 1.00 31.42 C
ATOM 19 N6 A A 30 -3.665 18.927 -24.784 1.00 31.56 N
ATOM 20 N1 A A 30 -5.260 19.687 -23.284 1.00 28.27 N
ATOM 21 C2 A A 30 -6.470 20.215 -23.062 1.00 31.70 C
ATOM 22 N3 A A 30 -7.406 20.569 -23.943 1.00 30.15 N
ATOM 23 C4 A A 30 -6.995 20.326 -25.198 1.00 30.81 C
ATOM 24 P A A 31 -12.435 23.950 -27.689 1.00 42.23 P
ATOM 25 OP1 A A 31 -12.369 23.960 -29.169 1.00 40.71 O
ATOM 26 OP2 A A 31 -12.461 25.228 -26.947 1.00 38.86 O
ATOM 27 O5' A A 31 -13.696 23.076 -27.248 1.00 40.26 O
TER
ATOM 1 O3' G B 59 0.537 17.368 -21.641 1.00 30.26 O
ATOM 2 P C B 60 -0.123 18.357 -22.709 1.00 30.69 P
ATOM 3 OP1 C B 60 -0.125 19.730 -22.158 1.00 33.13 O
ATOM 4 OP2 C B 60 -1.386 17.742 -23.168 1.00 30.36 O
ATOM 5 O5' C B 60 0.942 18.305 -23.904 1.00 30.17 O
ATOM 6 C5' C B 60 0.619 17.627 -25.113 1.00 29.21 C
ATOM 7 C4' C B 60 1.848 16.963 -25.705 1.00 29.23 C
ATOM 8 O4' C B 60 2.935 17.913 -25.829 1.00 31.94 O
ATOM 9 C3' C B 60 2.422 15.853 -24.842 1.00 31.17 C
ATOM 10 O3' C B 60 1.718 14.664 -25.105 1.00 30.33 O
ATOM 11 C2' C B 60 3.856 15.799 -25.354 1.00 33.92 C
ATOM 12 O2' C B 60 3.959 15.168 -26.614 1.00 33.96 O
ATOM 13 C1' C B 60 4.156 17.288 -25.485 1.00 29.69 C
ATOM 14 N1 C B 60 4.664 17.892 -24.222 1.00 31.37 N
ATOM 15 C2 C B 60 5.931 17.529 -23.756 1.00 32.03 C
ATOM 16 O2 C B 60 6.598 16.717 -24.410 1.00 33.27 O
ATOM 17 N3 C B 60 6.391 18.078 -22.604 1.00 29.52 N
ATOM 18 C4 C B 60 5.638 18.952 -21.933 1.00 31.10 C
ATOM 19 N4 C B 60 6.136 19.468 -20.802 1.00 26.14 N
ATOM 20 C5 C B 60 4.343 19.334 -22.394 1.00 27.78 C
ATOM 21 C6 C B 60 3.900 18.785 -23.531 1.00 30.35 C
ATOM 22 P C B 61 1.630 13.522 -23.990 1.00 30.44 P
ATOM 23 OP1 C B 61 0.738 12.484 -24.540 1.00 27.90 O
ATOM 24 OP2 C B 61 1.333 14.136 -22.677 1.00 28.93 O
ATOM 25 O5' C B 61 3.127 12.965 -23.937 1.00 30.88 O
TER
ATOM 2 P A A 30 -11.823 18.514 -30.001 1.00 35.85 P
ATOM 3 OP1 A A 30 -12.878 19.445 -30.455 1.00 40.07 O
ATOM 4 OP2 A A 30 -10.723 18.125 -30.912 1.00 35.19 O
ATOM 5 O5' A A 30 -11.176 19.119 -28.671 1.00 31.91 O
ATOM 6 C5' A A 30 -12.006 19.626 -27.642 1.00 35.01 C
ATOM 7 C4' A A 30 -11.241 20.698 -26.895 1.00 33.10 C
ATOM 8 O4' A A 30 -10.009 20.132 -26.378 1.00 27.06 O
ATOM 9 C3' A A 30 -10.826 21.883 -27.764 1.00 33.44 C
ATOM 10 O3' A A 30 -11.191 23.105 -27.143 1.00 39.60 O
ATOM 11 C2' A A 30 -9.309 21.749 -27.853 1.00 35.52 C
ATOM 12 O2' A A 30 -8.662 22.999 -27.983 1.00 33.27 O
ATOM 13 C1' A A 30 -9.023 21.131 -26.492 1.00 31.70 C
ATOM 14 N9 A A 30 -7.687 20.558 -26.365 1.00 31.49 N
ATOM 15 C8 A A 30 -6.862 20.154 -27.377 1.00 31.43 C
ATOM 16 N7 A A 30 -5.709 19.685 -26.962 1.00 32.82 N
ATOM 17 C5 A A 30 -5.782 19.788 -25.583 1.00 32.07 C
ATOM 18 C6 A A 30 -4.874 19.455 -24.556 1.00 31.42 C
ATOM 19 N6 A A 30 -3.665 18.927 -24.784 1.00 31.56 N
ATOM 20 N1 A A 30 -5.260 19.687 -23.284 1.00 28.27 N
ATOM 21 C2 A A 30 -6.470 20.215 -23.062 1.00 31.70 C
ATOM 22 N3 A A 30 -7.406 20.569 -23.943 1.00 30.15 N
ATOM 23 C4 A A 30 -6.995 20.326 -25.198 1.00 30.81 C
ATOM 24 P A A 31 -12.435 23.950 -27.689 1.00 42.23 P
ATOM 25 OP1 A A 31 -12.369 23.960 -29.169 1.00 40.71 O
ATOM 26 OP2 A A 31 -12.461 25.228 -26.947 1.00 38.86 O
ATOM 27 O5' A A 31 -13.696 23.076 -27.248 1.00 40.26 O
TER
ATOM 1 O3' G B 59 0.537 17.368 -21.641 1.00 30.26 O
ATOM 2 P C B 60 -0.123 18.357 -22.709 1.00 30.69 P
ATOM 3 OP1 C B 60 -0.125 19.730 -22.158 1.00 33.13 O
ATOM 4 OP2 C B 60 -1.386 17.742 -23.168 1.00 30.36 O
ATOM 5 O5' C B 60 0.942 18.305 -23.904 1.00 30.17 O
ATOM 6 C5' C B 60 0.619 17.627 -25.113 1.00 29.21 C
ATOM 7 C4' C B 60 1.848 16.963 -25.705 1.00 29.23 C
ATOM 8 O4' C B 60 2.935 17.913 -25.829 1.00 31.94 O
ATOM 9 C3' C B 60 2.422 15.853 -24.842 1.00 31.17 C
ATOM 10 O3' C B 60 1.718 14.664 -25.105 1.00 30.33 O
ATOM 11 C2' C B 60 3.856 15.799 -25.354 1.00 33.92 C
ATOM 12 O2' C B 60 3.959 15.168 -26.614 1.00 33.96 O
ATOM 13 C1' C B 60 4.156 17.288 -25.485 1.00 29.69 C
ATOM 14 N1 C B 60 4.664 17.892 -24.222 1.00 31.37 N
ATOM 15 C2 C B 60 5.931 17.529 -23.756 1.00 32.03 C
ATOM 16 O2 C B 60 6.598 16.717 -24.410 1.00 33.27 O
ATOM 17 N3 C B 60 6.391 18.078 -22.604 1.00 29.52 N
ATOM 18 C4 C B 60 5.638 18.952 -21.933 1.00 31.10 C
ATOM 19 N4 C B 60 6.136 19.468 -20.802 1.00 26.14 N
ATOM 20 C5 C B 60 4.343 19.334 -22.394 1.00 27.78 C
ATOM 21 C6 C B 60 3.900 18.785 -23.531 1.00 30.35 C
ATOM 22 P C B 61 1.630 13.522 -23.990 1.00 30.44 P
ATOM 23 OP1 C B 61 0.738 12.484 -24.540 1.00 27.90 O
ATOM 24 OP2 C B 61 1.333 14.136 -22.677 1.00 28.93 O
ATOM 25 O5' C B 61 3.127 12.965 -23.937 1.00 30.88 O
TER
Atoms:
OP1: (-12.878,19.445,-30.455)
OP2: (-10.723,18.125,-30.912)
C3': (-10.826,21.883,-27.764)
C1': (-9.023,21.131,-26.492)
C5': (-12.006,19.626,-27.642)
O4': (-10.009,20.132,-26.378)
C8: (-6.862,20.154,-27.377)
O2': (-8.662,22.999,-27.983)
C6: (-4.874,19.455,-24.556)
C5: (-5.782,19.788,-25.583)
C4: (-6.995,20.326,-25.198)
P: (-11.823,18.514,-30.001)
C4': (-11.241,20.698,-26.895)
C2': (-9.309,21.749,-27.853)
C2: (-6.470,20.215,-23.062)
N1: (-5.260,19.687,-23.284)
N3: (-7.406,20.569,-23.943)
N6: (-3.665,18.927,-24.784)
N7: (-5.709,19.685,-26.962)
N9: (-7.687,20.558,-26.365)
O5': (-11.176,19.119,-28.671)
O3': (-11.191,23.105,-27.143)
OP2: (-10.723,18.125,-30.912)
C3': (-10.826,21.883,-27.764)
C1': (-9.023,21.131,-26.492)
C5': (-12.006,19.626,-27.642)
O4': (-10.009,20.132,-26.378)
C8: (-6.862,20.154,-27.377)
O2': (-8.662,22.999,-27.983)
C6: (-4.874,19.455,-24.556)
C5: (-5.782,19.788,-25.583)
C4: (-6.995,20.326,-25.198)
P: (-11.823,18.514,-30.001)
C4': (-11.241,20.698,-26.895)
C2': (-9.309,21.749,-27.853)
C2: (-6.470,20.215,-23.062)
N1: (-5.260,19.687,-23.284)
N3: (-7.406,20.569,-23.943)
N6: (-3.665,18.927,-24.784)
N7: (-5.709,19.685,-26.962)
N9: (-7.687,20.558,-26.365)
O5': (-11.176,19.119,-28.671)
O3': (-11.191,23.105,-27.143)
C2: (5.931,17.529,-23.756)
OP1: (-0.125,19.730,-22.158)
OP2: (-1.386,17.742,-23.168)
C4: (5.638,18.952,-21.933)
O5': (0.942,18.305,-23.904)
C3': (2.422,15.853,-24.842)
C1': (4.156,17.288,-25.485)
O4': (2.935,17.913,-25.829)
C5': (0.619,17.627,-25.113)
P: (-0.123,18.357,-22.709)
O2: (6.598,16.717,-24.410)
C4': (1.848,16.963,-25.705)
C2': (3.856,15.799,-25.354)
O2': (3.959,15.168,-26.614)
N1: (4.664,17.892,-24.222)
N3: (6.391,18.078,-22.604)
N4: (6.136,19.468,-20.802)
C6: (3.900,18.785,-23.531)
C5: (4.343,19.334,-22.394)
O3': (1.718,14.664,-25.105)
OP1: (-0.125,19.730,-22.158)
OP2: (-1.386,17.742,-23.168)
C4: (5.638,18.952,-21.933)
O5': (0.942,18.305,-23.904)
C3': (2.422,15.853,-24.842)
C1': (4.156,17.288,-25.485)
O4': (2.935,17.913,-25.829)
C5': (0.619,17.627,-25.113)
P: (-0.123,18.357,-22.709)
O2: (6.598,16.717,-24.410)
C4': (1.848,16.963,-25.705)
C2': (3.856,15.799,-25.354)
O2': (3.959,15.168,-26.614)
N1: (4.664,17.892,-24.222)
N3: (6.391,18.078,-22.604)
N4: (6.136,19.468,-20.802)
C6: (3.900,18.785,-23.531)
C5: (4.343,19.334,-22.394)
O3': (1.718,14.664,-25.105)
Image (generated by PyMOL):