Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:0575:0558
Extra
PDB:
ATOM 1 O3' C A 574 -13.363 88.471 114.376 1.00 61.05 O
ATOM 2 P A A 575 -13.039 89.042 112.908 1.00 62.94 P
ATOM 3 OP1 A A 575 -12.476 90.419 113.063 1.00 63.14 O
ATOM 4 OP2 A A 575 -14.264 88.842 112.089 1.00 62.42 O
ATOM 5 O5' A A 575 -11.912 88.063 112.346 1.00 60.23 O
ATOM 6 C5' A A 575 -11.715 87.908 110.925 1.00 59.81 C
ATOM 7 C4' A A 575 -10.265 87.601 110.617 1.00 57.96 C
ATOM 8 O4' A A 575 -9.432 88.691 111.104 1.00 58.03 O
ATOM 9 C3' A A 575 -9.693 86.333 111.236 1.00 57.24 C
ATOM 10 O3' A A 575 -8.729 85.810 110.333 1.00 57.40 O
ATOM 11 C2' A A 575 -9.011 86.856 112.499 1.00 57.70 C
ATOM 12 O2' A A 575 -7.965 86.021 112.959 1.00 58.45 O
ATOM 13 C1' A A 575 -8.458 88.187 111.998 1.00 57.01 C
ATOM 14 N9 A A 575 -8.201 89.204 113.021 1.00 56.23 N
ATOM 15 C8 A A 575 -9.118 89.943 113.729 1.00 56.01 C
ATOM 16 N7 A A 575 -8.577 90.821 114.541 1.00 55.59 N
ATOM 17 C5 A A 575 -7.211 90.641 114.367 1.00 54.56 C
ATOM 18 C6 A A 575 -6.093 91.276 114.940 1.00 54.45 C
ATOM 19 N6 A A 575 -6.181 92.252 115.852 1.00 55.17 N
ATOM 20 N1 A A 575 -4.866 90.869 114.543 1.00 53.86 N
ATOM 21 C2 A A 575 -4.779 89.884 113.640 1.00 54.55 C
ATOM 22 N3 A A 575 -5.755 89.204 113.035 1.00 55.71 N
ATOM 23 C4 A A 575 -6.963 89.640 113.444 1.00 55.51 C
ATOM 24 P G A 576 -9.052 84.469 109.515 1.00 59.39 P
ATOM 25 OP1 G A 576 -10.515 84.239 109.607 1.00 63.44 O
ATOM 26 OP2 G A 576 -8.115 83.400 109.943 1.00 60.24 O
ATOM 27 O5' G A 576 -8.755 84.850 107.994 1.00 60.28 O
TER
ATOM 1 O3' A B 557 -2.486 94.642 117.331 1.00 49.13 O
ATOM 2 P C B 558 -3.401 94.223 118.579 1.00 51.64 P
ATOM 3 OP1 C B 558 -2.509 93.662 119.637 1.00 51.37 O
ATOM 4 OP2 C B 558 -4.536 93.398 118.063 1.00 51.04 O
ATOM 5 O5' C B 558 -3.964 95.625 119.080 1.00 49.42 O
ATOM 6 C5' C B 558 -3.067 96.709 119.341 1.00 51.65 C
ATOM 7 C4' C B 558 -3.841 97.979 119.558 1.00 54.27 C
ATOM 8 O4' C B 558 -4.636 98.242 118.375 1.00 55.32 O
ATOM 9 C3' C B 558 -4.862 97.933 120.681 1.00 55.99 C
ATOM 10 O3' C B 558 -4.276 98.191 121.950 1.00 59.67 O
ATOM 11 C2' C B 558 -5.829 99.025 120.265 1.00 55.47 C
ATOM 12 O2' C B 558 -5.295 100.309 120.519 1.00 55.09 O
ATOM 13 C1' C B 558 -5.887 98.792 118.755 1.00 55.48 C
ATOM 14 N1 C B 558 -6.940 97.840 118.354 1.00 56.01 N
ATOM 15 C2 C B 558 -8.236 98.317 118.124 1.00 56.55 C
ATOM 16 O2 C B 558 -8.476 99.527 118.313 1.00 59.73 O
ATOM 17 N3 C B 558 -9.195 97.452 117.711 1.00 55.20 N
ATOM 18 C4 C B 558 -8.900 96.159 117.544 1.00 55.44 C
ATOM 19 N4 C B 558 -9.869 95.336 117.127 1.00 54.96 N
ATOM 20 C5 C B 558 -7.597 95.647 117.794 1.00 56.12 C
ATOM 21 C6 C B 558 -6.658 96.512 118.194 1.00 55.87 C
ATOM 22 P C B 559 -4.760 97.351 123.234 1.00 61.86 P
ATOM 23 OP1 C B 559 -4.225 98.043 124.441 1.00 60.55 O
ATOM 24 OP2 C B 559 -4.448 95.904 123.006 1.00 58.04 O
ATOM 25 O5' C B 559 -6.343 97.530 123.225 1.00 62.19 O
TER
ATOM 2 P A A 575 -13.039 89.042 112.908 1.00 62.94 P
ATOM 3 OP1 A A 575 -12.476 90.419 113.063 1.00 63.14 O
ATOM 4 OP2 A A 575 -14.264 88.842 112.089 1.00 62.42 O
ATOM 5 O5' A A 575 -11.912 88.063 112.346 1.00 60.23 O
ATOM 6 C5' A A 575 -11.715 87.908 110.925 1.00 59.81 C
ATOM 7 C4' A A 575 -10.265 87.601 110.617 1.00 57.96 C
ATOM 8 O4' A A 575 -9.432 88.691 111.104 1.00 58.03 O
ATOM 9 C3' A A 575 -9.693 86.333 111.236 1.00 57.24 C
ATOM 10 O3' A A 575 -8.729 85.810 110.333 1.00 57.40 O
ATOM 11 C2' A A 575 -9.011 86.856 112.499 1.00 57.70 C
ATOM 12 O2' A A 575 -7.965 86.021 112.959 1.00 58.45 O
ATOM 13 C1' A A 575 -8.458 88.187 111.998 1.00 57.01 C
ATOM 14 N9 A A 575 -8.201 89.204 113.021 1.00 56.23 N
ATOM 15 C8 A A 575 -9.118 89.943 113.729 1.00 56.01 C
ATOM 16 N7 A A 575 -8.577 90.821 114.541 1.00 55.59 N
ATOM 17 C5 A A 575 -7.211 90.641 114.367 1.00 54.56 C
ATOM 18 C6 A A 575 -6.093 91.276 114.940 1.00 54.45 C
ATOM 19 N6 A A 575 -6.181 92.252 115.852 1.00 55.17 N
ATOM 20 N1 A A 575 -4.866 90.869 114.543 1.00 53.86 N
ATOM 21 C2 A A 575 -4.779 89.884 113.640 1.00 54.55 C
ATOM 22 N3 A A 575 -5.755 89.204 113.035 1.00 55.71 N
ATOM 23 C4 A A 575 -6.963 89.640 113.444 1.00 55.51 C
ATOM 24 P G A 576 -9.052 84.469 109.515 1.00 59.39 P
ATOM 25 OP1 G A 576 -10.515 84.239 109.607 1.00 63.44 O
ATOM 26 OP2 G A 576 -8.115 83.400 109.943 1.00 60.24 O
ATOM 27 O5' G A 576 -8.755 84.850 107.994 1.00 60.28 O
TER
ATOM 1 O3' A B 557 -2.486 94.642 117.331 1.00 49.13 O
ATOM 2 P C B 558 -3.401 94.223 118.579 1.00 51.64 P
ATOM 3 OP1 C B 558 -2.509 93.662 119.637 1.00 51.37 O
ATOM 4 OP2 C B 558 -4.536 93.398 118.063 1.00 51.04 O
ATOM 5 O5' C B 558 -3.964 95.625 119.080 1.00 49.42 O
ATOM 6 C5' C B 558 -3.067 96.709 119.341 1.00 51.65 C
ATOM 7 C4' C B 558 -3.841 97.979 119.558 1.00 54.27 C
ATOM 8 O4' C B 558 -4.636 98.242 118.375 1.00 55.32 O
ATOM 9 C3' C B 558 -4.862 97.933 120.681 1.00 55.99 C
ATOM 10 O3' C B 558 -4.276 98.191 121.950 1.00 59.67 O
ATOM 11 C2' C B 558 -5.829 99.025 120.265 1.00 55.47 C
ATOM 12 O2' C B 558 -5.295 100.309 120.519 1.00 55.09 O
ATOM 13 C1' C B 558 -5.887 98.792 118.755 1.00 55.48 C
ATOM 14 N1 C B 558 -6.940 97.840 118.354 1.00 56.01 N
ATOM 15 C2 C B 558 -8.236 98.317 118.124 1.00 56.55 C
ATOM 16 O2 C B 558 -8.476 99.527 118.313 1.00 59.73 O
ATOM 17 N3 C B 558 -9.195 97.452 117.711 1.00 55.20 N
ATOM 18 C4 C B 558 -8.900 96.159 117.544 1.00 55.44 C
ATOM 19 N4 C B 558 -9.869 95.336 117.127 1.00 54.96 N
ATOM 20 C5 C B 558 -7.597 95.647 117.794 1.00 56.12 C
ATOM 21 C6 C B 558 -6.658 96.512 118.194 1.00 55.87 C
ATOM 22 P C B 559 -4.760 97.351 123.234 1.00 61.86 P
ATOM 23 OP1 C B 559 -4.225 98.043 124.441 1.00 60.55 O
ATOM 24 OP2 C B 559 -4.448 95.904 123.006 1.00 58.04 O
ATOM 25 O5' C B 559 -6.343 97.530 123.225 1.00 62.19 O
TER
Atoms:
OP1: (-12.476,90.419,113.063)
OP2: (-14.264,88.842,112.089)
C3': (-9.693,86.333,111.236)
C1': (-8.458,88.187,111.998)
C5': (-11.715,87.908,110.925)
O4': (-9.432,88.691,111.104)
C8: (-9.118,89.943,113.729)
O2': (-7.965,86.021,112.959)
C6: (-6.093,91.276,114.940)
C5: (-7.211,90.641,114.367)
C4: (-6.963,89.640,113.444)
P: (-13.039,89.042,112.908)
C4': (-10.265,87.601,110.617)
C2': (-9.011,86.856,112.499)
C2: (-4.779,89.884,113.640)
N1: (-4.866,90.869,114.543)
N3: (-5.755,89.204,113.035)
N6: (-6.181,92.252,115.852)
N7: (-8.577,90.821,114.541)
N9: (-8.201,89.204,113.021)
O5': (-11.912,88.063,112.346)
O3': (-8.729,85.810,110.333)
OP2: (-14.264,88.842,112.089)
C3': (-9.693,86.333,111.236)
C1': (-8.458,88.187,111.998)
C5': (-11.715,87.908,110.925)
O4': (-9.432,88.691,111.104)
C8: (-9.118,89.943,113.729)
O2': (-7.965,86.021,112.959)
C6: (-6.093,91.276,114.940)
C5: (-7.211,90.641,114.367)
C4: (-6.963,89.640,113.444)
P: (-13.039,89.042,112.908)
C4': (-10.265,87.601,110.617)
C2': (-9.011,86.856,112.499)
C2: (-4.779,89.884,113.640)
N1: (-4.866,90.869,114.543)
N3: (-5.755,89.204,113.035)
N6: (-6.181,92.252,115.852)
N7: (-8.577,90.821,114.541)
N9: (-8.201,89.204,113.021)
O5': (-11.912,88.063,112.346)
O3': (-8.729,85.810,110.333)
C2: (-8.236,98.317,118.124)
OP1: (-2.509,93.662,119.637)
OP2: (-4.536,93.398,118.063)
C4: (-8.900,96.159,117.544)
O5': (-3.964,95.625,119.080)
C3': (-4.862,97.933,120.681)
C1': (-5.887,98.792,118.755)
O4': (-4.636,98.242,118.375)
C5': (-3.067,96.709,119.341)
P: (-3.401,94.223,118.579)
O2: (-8.476,99.527,118.313)
C4': (-3.841,97.979,119.558)
C2': (-5.829,99.025,120.265)
O2': (-5.295,100.309,120.519)
N1: (-6.940,97.840,118.354)
N3: (-9.195,97.452,117.711)
N4: (-9.869,95.336,117.127)
C6: (-6.658,96.512,118.194)
C5: (-7.597,95.647,117.794)
O3': (-4.276,98.191,121.950)
OP1: (-2.509,93.662,119.637)
OP2: (-4.536,93.398,118.063)
C4: (-8.900,96.159,117.544)
O5': (-3.964,95.625,119.080)
C3': (-4.862,97.933,120.681)
C1': (-5.887,98.792,118.755)
O4': (-4.636,98.242,118.375)
C5': (-3.067,96.709,119.341)
P: (-3.401,94.223,118.579)
O2: (-8.476,99.527,118.313)
C4': (-3.841,97.979,119.558)
C2': (-5.829,99.025,120.265)
O2': (-5.295,100.309,120.519)
N1: (-6.940,97.840,118.354)
N3: (-9.195,97.452,117.711)
N4: (-9.869,95.336,117.127)
C6: (-6.658,96.512,118.194)
C5: (-7.597,95.647,117.794)
O3': (-4.276,98.191,121.950)
Image (generated by PyMOL):