Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DW4:A7:A19
Extra
PDB:
ATOM 1 O3' U A 6 4.234 1.638 1.429 1.00 8.49 O
ATOM 2 P A A 7 5.578 0.775 1.330 1.00 9.19 P
ATOM 3 OP1 A A 7 6.442 1.349 0.276 1.00 9.54 O
ATOM 4 OP2 A A 7 5.157 -0.647 1.267 1.00 9.97 O
ATOM 5 O5' A A 7 6.257 1.062 2.748 1.00 8.80 O
ATOM 6 C5' A A 7 7.404 0.323 3.162 1.00 9.48 C
ATOM 7 C4' A A 7 8.454 1.238 3.770 1.00 9.25 C
ATOM 8 O4' A A 7 9.026 2.078 2.732 1.00 8.99 O
ATOM 9 C3' A A 7 7.966 2.189 4.861 1.00 10.07 C
ATOM 10 O3' A A 7 8.974 2.379 5.842 1.00 11.70 O
ATOM 11 C2' A A 7 7.761 3.480 4.084 1.00 9.08 C
ATOM 12 O2' A A 7 7.815 4.632 4.906 1.00 9.98 O
ATOM 13 C1' A A 7 8.971 3.418 3.158 1.00 9.03 C
ATOM 14 N9 A A 7 8.843 4.264 1.979 1.00 8.38 N
ATOM 15 C8 A A 7 8.044 4.037 0.893 1.00 8.38 C
ATOM 16 N7 A A 7 8.119 4.974 -0.022 1.00 8.39 N
ATOM 17 C5 A A 7 9.028 5.875 0.503 1.00 8.29 C
ATOM 18 C6 A A 7 9.538 7.089 0.012 1.00 8.65 C
ATOM 19 N6 A A 7 9.173 7.608 -1.164 1.00 9.31 N
ATOM 20 N1 A A 7 10.432 7.747 0.781 1.00 9.12 N
ATOM 21 C2 A A 7 10.784 7.218 1.957 1.00 9.34 C
ATOM 22 N3 A A 7 10.371 6.085 2.524 1.00 8.95 N
ATOM 23 C4 A A 7 9.487 5.454 1.736 1.00 8.25 C
ATOM 24 P G A 8 9.105 1.442 7.128 1.00 11.53 P
ATOM 25 OP1 G A 8 8.838 0.041 6.734 1.00 14.68 O
ATOM 26 OP2 G A 8 8.375 2.060 8.251 1.00 13.85 O
ATOM 27 O5' G A 8 10.652 1.646 7.501 1.00 13.60 O
TER
ATOM 1 O3' A B 18 11.817 11.350 -2.374 1.00 9.52 O
ATOM 2 P C B 19 10.241 11.586 -2.556 1.00 9.88 P
ATOM 3 OP1 C B 19 9.948 12.944 -2.046 1.00 11.42 O
ATOM 4 OP2 C B 19 9.514 10.423 -1.999 1.00 9.75 O
ATOM 5 O5' C B 19 10.043 11.546 -4.139 1.00 10.14 O
ATOM 6 C5' C B 19 10.784 12.422 -4.979 1.00 11.22 C
ATOM 7 C4' C B 19 10.599 12.011 -6.426 1.00 12.17 C
ATOM 8 O4' C B 19 10.972 10.619 -6.572 1.00 12.07 O
ATOM 9 C3' C B 19 9.164 12.059 -6.933 1.00 12.60 C
ATOM 10 O3' C B 19 8.807 13.369 -7.347 1.00 13.28 O
ATOM 11 C2' C B 19 9.263 11.120 -8.125 1.00 13.05 C
ATOM 12 O2' C B 19 9.920 11.734 -9.215 1.00 14.46 O
ATOM 13 C1' C B 19 10.136 10.013 -7.541 1.00 12.07 C
ATOM 14 N1 C B 19 9.351 8.902 -6.914 1.00 11.01 N
ATOM 15 C2 C B 19 8.672 8.033 -7.769 1.00 11.46 C
ATOM 16 O2 C B 19 8.751 8.230 -8.988 1.00 12.82 O
ATOM 17 N3 C B 19 7.953 7.014 -7.236 1.00 11.02 N
ATOM 18 C4 C B 19 7.907 6.848 -5.913 1.00 10.35 C
ATOM 19 N4 C B 19 7.183 5.825 -5.444 1.00 10.56 N
ATOM 20 C5 C B 19 8.595 7.727 -5.022 1.00 10.03 C
ATOM 21 C6 C B 19 9.302 8.730 -5.560 1.00 10.11 C
ATOM 22 P C B 20 7.418 14.014 -6.874 1.00 13.85 P
ATOM 23 OP1 C B 20 7.405 15.415 -7.353 1.00 15.37 O
ATOM 24 OP2 C B 20 7.230 13.722 -5.436 1.00 14.11 O
ATOM 25 O5' C B 20 6.315 13.168 -7.660 1.00 13.65 O
TER
ATOM 2 P A A 7 5.578 0.775 1.330 1.00 9.19 P
ATOM 3 OP1 A A 7 6.442 1.349 0.276 1.00 9.54 O
ATOM 4 OP2 A A 7 5.157 -0.647 1.267 1.00 9.97 O
ATOM 5 O5' A A 7 6.257 1.062 2.748 1.00 8.80 O
ATOM 6 C5' A A 7 7.404 0.323 3.162 1.00 9.48 C
ATOM 7 C4' A A 7 8.454 1.238 3.770 1.00 9.25 C
ATOM 8 O4' A A 7 9.026 2.078 2.732 1.00 8.99 O
ATOM 9 C3' A A 7 7.966 2.189 4.861 1.00 10.07 C
ATOM 10 O3' A A 7 8.974 2.379 5.842 1.00 11.70 O
ATOM 11 C2' A A 7 7.761 3.480 4.084 1.00 9.08 C
ATOM 12 O2' A A 7 7.815 4.632 4.906 1.00 9.98 O
ATOM 13 C1' A A 7 8.971 3.418 3.158 1.00 9.03 C
ATOM 14 N9 A A 7 8.843 4.264 1.979 1.00 8.38 N
ATOM 15 C8 A A 7 8.044 4.037 0.893 1.00 8.38 C
ATOM 16 N7 A A 7 8.119 4.974 -0.022 1.00 8.39 N
ATOM 17 C5 A A 7 9.028 5.875 0.503 1.00 8.29 C
ATOM 18 C6 A A 7 9.538 7.089 0.012 1.00 8.65 C
ATOM 19 N6 A A 7 9.173 7.608 -1.164 1.00 9.31 N
ATOM 20 N1 A A 7 10.432 7.747 0.781 1.00 9.12 N
ATOM 21 C2 A A 7 10.784 7.218 1.957 1.00 9.34 C
ATOM 22 N3 A A 7 10.371 6.085 2.524 1.00 8.95 N
ATOM 23 C4 A A 7 9.487 5.454 1.736 1.00 8.25 C
ATOM 24 P G A 8 9.105 1.442 7.128 1.00 11.53 P
ATOM 25 OP1 G A 8 8.838 0.041 6.734 1.00 14.68 O
ATOM 26 OP2 G A 8 8.375 2.060 8.251 1.00 13.85 O
ATOM 27 O5' G A 8 10.652 1.646 7.501 1.00 13.60 O
TER
ATOM 1 O3' A B 18 11.817 11.350 -2.374 1.00 9.52 O
ATOM 2 P C B 19 10.241 11.586 -2.556 1.00 9.88 P
ATOM 3 OP1 C B 19 9.948 12.944 -2.046 1.00 11.42 O
ATOM 4 OP2 C B 19 9.514 10.423 -1.999 1.00 9.75 O
ATOM 5 O5' C B 19 10.043 11.546 -4.139 1.00 10.14 O
ATOM 6 C5' C B 19 10.784 12.422 -4.979 1.00 11.22 C
ATOM 7 C4' C B 19 10.599 12.011 -6.426 1.00 12.17 C
ATOM 8 O4' C B 19 10.972 10.619 -6.572 1.00 12.07 O
ATOM 9 C3' C B 19 9.164 12.059 -6.933 1.00 12.60 C
ATOM 10 O3' C B 19 8.807 13.369 -7.347 1.00 13.28 O
ATOM 11 C2' C B 19 9.263 11.120 -8.125 1.00 13.05 C
ATOM 12 O2' C B 19 9.920 11.734 -9.215 1.00 14.46 O
ATOM 13 C1' C B 19 10.136 10.013 -7.541 1.00 12.07 C
ATOM 14 N1 C B 19 9.351 8.902 -6.914 1.00 11.01 N
ATOM 15 C2 C B 19 8.672 8.033 -7.769 1.00 11.46 C
ATOM 16 O2 C B 19 8.751 8.230 -8.988 1.00 12.82 O
ATOM 17 N3 C B 19 7.953 7.014 -7.236 1.00 11.02 N
ATOM 18 C4 C B 19 7.907 6.848 -5.913 1.00 10.35 C
ATOM 19 N4 C B 19 7.183 5.825 -5.444 1.00 10.56 N
ATOM 20 C5 C B 19 8.595 7.727 -5.022 1.00 10.03 C
ATOM 21 C6 C B 19 9.302 8.730 -5.560 1.00 10.11 C
ATOM 22 P C B 20 7.418 14.014 -6.874 1.00 13.85 P
ATOM 23 OP1 C B 20 7.405 15.415 -7.353 1.00 15.37 O
ATOM 24 OP2 C B 20 7.230 13.722 -5.436 1.00 14.11 O
ATOM 25 O5' C B 20 6.315 13.168 -7.660 1.00 13.65 O
TER
Atoms:
OP1: (6.442,1.349,0.276)
OP2: (5.157,-0.647,1.267)
C3': (7.966,2.189,4.861)
C1': (8.971,3.418,3.158)
C5': (7.404,0.323,3.162)
O4': (9.026,2.078,2.732)
C8: (8.044,4.037,0.893)
O2': (7.815,4.632,4.906)
C6: (9.538,7.089,0.012)
C5: (9.028,5.875,0.503)
C4: (9.487,5.454,1.736)
P: (5.578,0.775,1.330)
C4': (8.454,1.238,3.770)
C2': (7.761,3.480,4.084)
C2: (10.784,7.218,1.957)
N1: (10.432,7.747,0.781)
N3: (10.371,6.085,2.524)
N6: (9.173,7.608,-1.164)
N7: (8.119,4.974,-0.022)
N9: (8.843,4.264,1.979)
O5': (6.257,1.062,2.748)
O3': (8.974,2.379,5.842)
OP2: (5.157,-0.647,1.267)
C3': (7.966,2.189,4.861)
C1': (8.971,3.418,3.158)
C5': (7.404,0.323,3.162)
O4': (9.026,2.078,2.732)
C8: (8.044,4.037,0.893)
O2': (7.815,4.632,4.906)
C6: (9.538,7.089,0.012)
C5: (9.028,5.875,0.503)
C4: (9.487,5.454,1.736)
P: (5.578,0.775,1.330)
C4': (8.454,1.238,3.770)
C2': (7.761,3.480,4.084)
C2: (10.784,7.218,1.957)
N1: (10.432,7.747,0.781)
N3: (10.371,6.085,2.524)
N6: (9.173,7.608,-1.164)
N7: (8.119,4.974,-0.022)
N9: (8.843,4.264,1.979)
O5': (6.257,1.062,2.748)
O3': (8.974,2.379,5.842)
C2: (8.672,8.033,-7.769)
OP1: (9.948,12.944,-2.046)
OP2: (9.514,10.423,-1.999)
C4: (7.907,6.848,-5.913)
O5': (10.043,11.546,-4.139)
C3': (9.164,12.059,-6.933)
C1': (10.136,10.013,-7.541)
O4': (10.972,10.619,-6.572)
C5': (10.784,12.422,-4.979)
P: (10.241,11.586,-2.556)
O2: (8.751,8.230,-8.988)
C4': (10.599,12.011,-6.426)
C2': (9.263,11.120,-8.125)
O2': (9.920,11.734,-9.215)
N1: (9.351,8.902,-6.914)
N3: (7.953,7.014,-7.236)
N4: (7.183,5.825,-5.444)
C6: (9.302,8.730,-5.560)
C5: (8.595,7.727,-5.022)
O3': (8.807,13.369,-7.347)
OP1: (9.948,12.944,-2.046)
OP2: (9.514,10.423,-1.999)
C4: (7.907,6.848,-5.913)
O5': (10.043,11.546,-4.139)
C3': (9.164,12.059,-6.933)
C1': (10.136,10.013,-7.541)
O4': (10.972,10.619,-6.572)
C5': (10.784,12.422,-4.979)
P: (10.241,11.586,-2.556)
O2: (8.751,8.230,-8.988)
C4': (10.599,12.011,-6.426)
C2': (9.263,11.120,-8.125)
O2': (9.920,11.734,-9.215)
N1: (9.351,8.902,-6.914)
N3: (7.953,7.014,-7.236)
N4: (7.183,5.825,-5.444)
C6: (9.302,8.730,-5.560)
C5: (8.595,7.727,-5.022)
O3': (8.807,13.369,-7.347)
Image (generated by PyMOL):