Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2V:A36:A34
Extra
PDB:
ATOM 1 O3' C A 35 -15.105 8.459 -28.532 1.00 38.58 O
ATOM 2 P C A 36 -15.474 7.146 -27.699 1.00 37.24 P
ATOM 3 OP1 C A 36 -14.801 5.993 -28.331 1.00 41.20 O
ATOM 4 OP2 C A 36 -16.935 7.131 -27.474 1.00 34.30 O
ATOM 5 O5' C A 36 -14.761 7.407 -26.296 1.00 33.19 O
ATOM 6 C5' C A 36 -13.350 7.429 -26.199 1.00 32.84 C
ATOM 7 C4' C A 36 -12.985 7.854 -24.793 1.00 34.59 C
ATOM 8 O4' C A 36 -13.589 9.143 -24.532 1.00 29.95 O
ATOM 9 C3' C A 36 -13.563 6.978 -23.695 1.00 30.07 C
ATOM 10 O3' C A 36 -12.766 5.823 -23.508 1.00 28.90 O
ATOM 11 C2' C A 36 -13.467 7.930 -22.509 1.00 29.24 C
ATOM 12 O2' C A 36 -12.147 8.081 -22.032 1.00 27.35 O
ATOM 13 C1' C A 36 -13.902 9.238 -23.156 1.00 29.67 C
ATOM 14 N1 C A 36 -15.349 9.514 -22.995 1.00 31.46 N
ATOM 15 C2 C A 36 -15.799 9.946 -21.750 1.00 29.40 C
ATOM 16 O2 C A 36 -14.975 10.075 -20.841 1.00 26.76 O
ATOM 17 N3 C A 36 -17.117 10.207 -21.577 1.00 30.50 N
ATOM 18 C4 C A 36 -17.963 10.046 -22.594 1.00 34.33 C
ATOM 19 N4 C A 36 -19.254 10.315 -22.370 1.00 33.52 N
ATOM 20 C5 C A 36 -17.522 9.602 -23.877 1.00 34.85 C
ATOM 21 C6 C A 36 -16.218 9.347 -24.034 1.00 34.69 C
ATOM 22 P C A 37 -13.455 4.448 -23.061 1.00 31.75 P
ATOM 23 OP1 C A 37 -12.418 3.397 -23.139 1.00 30.73 O
ATOM 24 OP2 C A 37 -14.731 4.303 -23.791 1.00 29.10 O
ATOM 25 O5' C A 37 -13.766 4.698 -21.514 1.00 27.42 O
TER
ATOM 1 O3' G B 33 -21.485 14.541 -31.491 1.00 55.83 O
ATOM 2 P U B 34 -22.785 14.231 -30.616 1.00 63.56 P
ATOM 3 OP1 U B 34 -23.962 14.735 -31.358 1.00 65.43 O
ATOM 4 OP2 U B 34 -22.529 14.699 -29.236 1.00 62.26 O
ATOM 5 O5' U B 34 -22.837 12.632 -30.634 1.00 59.13 O
ATOM 6 C5' U B 34 -23.207 11.916 -29.464 1.00 54.11 C
ATOM 7 C4' U B 34 -21.984 11.277 -28.833 1.00 49.90 C
ATOM 8 O4' U B 34 -22.065 11.439 -27.396 1.00 49.06 O
ATOM 9 C3' U B 34 -21.841 9.777 -29.063 1.00 51.72 C
ATOM 10 O3' U B 34 -20.473 9.388 -28.982 1.00 45.96 O
ATOM 11 C2' U B 34 -22.629 9.223 -27.882 1.00 51.41 C
ATOM 12 O2' U B 34 -22.275 7.891 -27.566 1.00 54.91 O
ATOM 13 C1' U B 34 -22.152 10.168 -26.786 1.00 49.96 C
ATOM 14 N1 U B 34 -23.072 10.270 -25.621 1.00 51.15 N
ATOM 15 C2 U B 34 -22.545 10.172 -24.351 1.00 47.50 C
ATOM 16 O2 U B 34 -21.357 10.006 -24.138 1.00 43.28 O
ATOM 17 N3 U B 34 -23.461 10.277 -23.335 1.00 45.26 N
ATOM 18 C4 U B 34 -24.825 10.464 -23.463 1.00 51.40 C
ATOM 19 O4 U B 34 -25.525 10.537 -22.457 1.00 54.63 O
ATOM 20 C5 U B 34 -25.299 10.556 -24.821 1.00 50.82 C
ATOM 21 C6 U B 34 -24.424 10.458 -25.829 1.00 49.10 C
ATOM 22 P C B 35 -19.496 9.552 -30.240 1.00 48.77 P
ATOM 23 OP1 C B 35 -20.100 10.529 -31.172 1.00 51.34 O
ATOM 24 OP2 C B 35 -19.131 8.201 -30.722 1.00 45.30 O
ATOM 25 O5' C B 35 -18.200 10.224 -29.592 1.00 45.34 O
TER
ATOM 2 P C A 36 -15.474 7.146 -27.699 1.00 37.24 P
ATOM 3 OP1 C A 36 -14.801 5.993 -28.331 1.00 41.20 O
ATOM 4 OP2 C A 36 -16.935 7.131 -27.474 1.00 34.30 O
ATOM 5 O5' C A 36 -14.761 7.407 -26.296 1.00 33.19 O
ATOM 6 C5' C A 36 -13.350 7.429 -26.199 1.00 32.84 C
ATOM 7 C4' C A 36 -12.985 7.854 -24.793 1.00 34.59 C
ATOM 8 O4' C A 36 -13.589 9.143 -24.532 1.00 29.95 O
ATOM 9 C3' C A 36 -13.563 6.978 -23.695 1.00 30.07 C
ATOM 10 O3' C A 36 -12.766 5.823 -23.508 1.00 28.90 O
ATOM 11 C2' C A 36 -13.467 7.930 -22.509 1.00 29.24 C
ATOM 12 O2' C A 36 -12.147 8.081 -22.032 1.00 27.35 O
ATOM 13 C1' C A 36 -13.902 9.238 -23.156 1.00 29.67 C
ATOM 14 N1 C A 36 -15.349 9.514 -22.995 1.00 31.46 N
ATOM 15 C2 C A 36 -15.799 9.946 -21.750 1.00 29.40 C
ATOM 16 O2 C A 36 -14.975 10.075 -20.841 1.00 26.76 O
ATOM 17 N3 C A 36 -17.117 10.207 -21.577 1.00 30.50 N
ATOM 18 C4 C A 36 -17.963 10.046 -22.594 1.00 34.33 C
ATOM 19 N4 C A 36 -19.254 10.315 -22.370 1.00 33.52 N
ATOM 20 C5 C A 36 -17.522 9.602 -23.877 1.00 34.85 C
ATOM 21 C6 C A 36 -16.218 9.347 -24.034 1.00 34.69 C
ATOM 22 P C A 37 -13.455 4.448 -23.061 1.00 31.75 P
ATOM 23 OP1 C A 37 -12.418 3.397 -23.139 1.00 30.73 O
ATOM 24 OP2 C A 37 -14.731 4.303 -23.791 1.00 29.10 O
ATOM 25 O5' C A 37 -13.766 4.698 -21.514 1.00 27.42 O
TER
ATOM 1 O3' G B 33 -21.485 14.541 -31.491 1.00 55.83 O
ATOM 2 P U B 34 -22.785 14.231 -30.616 1.00 63.56 P
ATOM 3 OP1 U B 34 -23.962 14.735 -31.358 1.00 65.43 O
ATOM 4 OP2 U B 34 -22.529 14.699 -29.236 1.00 62.26 O
ATOM 5 O5' U B 34 -22.837 12.632 -30.634 1.00 59.13 O
ATOM 6 C5' U B 34 -23.207 11.916 -29.464 1.00 54.11 C
ATOM 7 C4' U B 34 -21.984 11.277 -28.833 1.00 49.90 C
ATOM 8 O4' U B 34 -22.065 11.439 -27.396 1.00 49.06 O
ATOM 9 C3' U B 34 -21.841 9.777 -29.063 1.00 51.72 C
ATOM 10 O3' U B 34 -20.473 9.388 -28.982 1.00 45.96 O
ATOM 11 C2' U B 34 -22.629 9.223 -27.882 1.00 51.41 C
ATOM 12 O2' U B 34 -22.275 7.891 -27.566 1.00 54.91 O
ATOM 13 C1' U B 34 -22.152 10.168 -26.786 1.00 49.96 C
ATOM 14 N1 U B 34 -23.072 10.270 -25.621 1.00 51.15 N
ATOM 15 C2 U B 34 -22.545 10.172 -24.351 1.00 47.50 C
ATOM 16 O2 U B 34 -21.357 10.006 -24.138 1.00 43.28 O
ATOM 17 N3 U B 34 -23.461 10.277 -23.335 1.00 45.26 N
ATOM 18 C4 U B 34 -24.825 10.464 -23.463 1.00 51.40 C
ATOM 19 O4 U B 34 -25.525 10.537 -22.457 1.00 54.63 O
ATOM 20 C5 U B 34 -25.299 10.556 -24.821 1.00 50.82 C
ATOM 21 C6 U B 34 -24.424 10.458 -25.829 1.00 49.10 C
ATOM 22 P C B 35 -19.496 9.552 -30.240 1.00 48.77 P
ATOM 23 OP1 C B 35 -20.100 10.529 -31.172 1.00 51.34 O
ATOM 24 OP2 C B 35 -19.131 8.201 -30.722 1.00 45.30 O
ATOM 25 O5' C B 35 -18.200 10.224 -29.592 1.00 45.34 O
TER
Atoms:
C2: (-15.799,9.946,-21.750)
OP1: (-14.801,5.993,-28.331)
OP2: (-16.935,7.131,-27.474)
C4: (-17.963,10.046,-22.594)
O5': (-14.761,7.407,-26.296)
C3': (-13.563,6.978,-23.695)
C1': (-13.902,9.238,-23.156)
O4': (-13.589,9.143,-24.532)
C5': (-13.350,7.429,-26.199)
P: (-15.474,7.146,-27.699)
O2: (-14.975,10.075,-20.841)
C4': (-12.985,7.854,-24.793)
C2': (-13.467,7.930,-22.509)
O2': (-12.147,8.081,-22.032)
N1: (-15.349,9.514,-22.995)
N3: (-17.117,10.207,-21.577)
N4: (-19.254,10.315,-22.370)
C6: (-16.218,9.347,-24.034)
C5: (-17.522,9.602,-23.877)
O3': (-12.766,5.823,-23.508)
OP1: (-14.801,5.993,-28.331)
OP2: (-16.935,7.131,-27.474)
C4: (-17.963,10.046,-22.594)
O5': (-14.761,7.407,-26.296)
C3': (-13.563,6.978,-23.695)
C1': (-13.902,9.238,-23.156)
O4': (-13.589,9.143,-24.532)
C5': (-13.350,7.429,-26.199)
P: (-15.474,7.146,-27.699)
O2: (-14.975,10.075,-20.841)
C4': (-12.985,7.854,-24.793)
C2': (-13.467,7.930,-22.509)
O2': (-12.147,8.081,-22.032)
N1: (-15.349,9.514,-22.995)
N3: (-17.117,10.207,-21.577)
N4: (-19.254,10.315,-22.370)
C6: (-16.218,9.347,-24.034)
C5: (-17.522,9.602,-23.877)
O3': (-12.766,5.823,-23.508)
C4: (-24.825,10.464,-23.463)
N3: (-23.461,10.277,-23.335)
OP1: (-23.962,14.735,-31.358)
OP2: (-22.529,14.699,-29.236)
C2: (-22.545,10.172,-24.351)
C1': (-22.152,10.168,-26.786)
C3': (-21.841,9.777,-29.063)
O5': (-22.837,12.632,-30.634)
O4': (-22.065,11.439,-27.396)
C5': (-23.207,11.916,-29.464)
P: (-22.785,14.231,-30.616)
C4': (-21.984,11.277,-28.833)
C2': (-22.629,9.223,-27.882)
O2': (-22.275,7.891,-27.566)
N1: (-23.072,10.270,-25.621)
O4: (-25.525,10.537,-22.457)
O2: (-21.357,10.006,-24.138)
C6: (-24.424,10.458,-25.829)
C5: (-25.299,10.556,-24.821)
O3': (-20.473,9.388,-28.982)
N3: (-23.461,10.277,-23.335)
OP1: (-23.962,14.735,-31.358)
OP2: (-22.529,14.699,-29.236)
C2: (-22.545,10.172,-24.351)
C1': (-22.152,10.168,-26.786)
C3': (-21.841,9.777,-29.063)
O5': (-22.837,12.632,-30.634)
O4': (-22.065,11.439,-27.396)
C5': (-23.207,11.916,-29.464)
P: (-22.785,14.231,-30.616)
C4': (-21.984,11.277,-28.833)
C2': (-22.629,9.223,-27.882)
O2': (-22.275,7.891,-27.566)
N1: (-23.072,10.270,-25.621)
O4: (-25.525,10.537,-22.457)
O2: (-21.357,10.006,-24.138)
C6: (-24.424,10.458,-25.829)
C5: (-25.299,10.556,-24.821)
O3': (-20.473,9.388,-28.982)
Image (generated by PyMOL):