Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2G:A28:A44
Extra
PDB:
ATOM 1 O3' G A 27 -4.901 -10.657 29.016 1.00 53.00 O
ATOM 2 P A A 28 -5.361 -9.595 30.141 1.00 49.89 P
ATOM 3 OP1 A A 28 -4.841 -8.250 29.817 1.00 48.97 O
ATOM 4 OP2 A A 28 -4.962 -10.160 31.472 1.00 49.05 O
ATOM 5 O5' A A 28 -6.940 -9.474 29.912 1.00 41.88 O
ATOM 6 C5' A A 28 -7.804 -9.925 30.928 1.00 44.33 C
ATOM 7 C4' A A 28 -9.237 -9.912 30.463 1.00 44.70 C
ATOM 8 O4' A A 28 -9.423 -9.054 29.304 1.00 45.67 O
ATOM 9 C3' A A 28 -9.623 -11.258 29.943 1.00 41.69 C
ATOM 10 O3' A A 28 -10.062 -11.924 31.063 1.00 45.87 O
ATOM 11 C2' A A 28 -10.829 -10.946 29.066 1.00 44.06 C
ATOM 12 O2' A A 28 -12.092 -10.890 29.744 1.00 41.43 O
ATOM 13 C1' A A 28 -10.431 -9.602 28.475 1.00 43.21 C
ATOM 14 N9 A A 28 -9.892 -9.678 27.110 1.00 45.99 N
ATOM 15 C8 A A 28 -8.717 -9.137 26.642 1.00 44.00 C
ATOM 16 N7 A A 28 -8.499 -9.381 25.322 1.00 41.25 N
ATOM 17 C5 A A 28 -9.617 -10.114 24.928 1.00 43.20 C
ATOM 18 C6 A A 28 -10.022 -10.615 23.652 1.00 41.07 C
ATOM 19 N6 A A 28 -9.263 -10.453 22.535 1.00 35.28 N
ATOM 20 N1 A A 28 -11.195 -11.304 23.619 1.00 41.06 N
ATOM 21 C2 A A 28 -11.919 -11.449 24.727 1.00 40.53 C
ATOM 22 N3 A A 28 -11.638 -10.984 25.949 1.00 41.72 N
ATOM 23 C4 A A 28 -10.469 -10.319 26.001 1.00 45.18 C
ATOM 24 P G A 29 -9.640 -13.435 31.351 1.00 43.67 P
ATOM 25 OP1 G A 29 -10.064 -13.780 32.713 1.00 42.33 O
ATOM 26 OP2 G A 29 -8.198 -13.541 30.978 1.00 45.11 O
ATOM 27 O5' G A 29 -10.625 -14.143 30.280 1.00 42.69 O
TER
ATOM 1 O3' A B 43 -9.948 -10.875 19.598 1.00 32.69 O
ATOM 2 P C B 44 -8.771 -11.912 19.391 1.00 37.69 P
ATOM 3 OP1 C B 44 -8.673 -12.812 20.567 1.00 36.27 O
ATOM 4 OP2 C B 44 -7.573 -11.262 18.876 1.00 27.63 O
ATOM 5 O5' C B 44 -9.557 -12.886 18.366 1.00 36.22 O
ATOM 6 C5' C B 44 -9.154 -12.974 17.127 1.00 35.76 C
ATOM 7 C4' C B 44 -10.268 -13.290 16.174 1.00 31.90 C
ATOM 8 O4' C B 44 -10.765 -12.036 15.673 1.00 30.03 O
ATOM 9 C3' C B 44 -9.460 -13.762 14.996 1.00 33.80 C
ATOM 10 O3' C B 44 -9.210 -15.113 15.249 1.00 32.26 O
ATOM 11 C2' C B 44 -10.367 -13.362 13.843 1.00 34.07 C
ATOM 12 O2' C B 44 -11.511 -14.182 13.892 1.00 33.62 O
ATOM 13 C1' C B 44 -10.747 -11.943 14.286 1.00 29.61 C
ATOM 14 N1 C B 44 -9.797 -10.876 13.951 1.00 28.44 N
ATOM 15 C2 C B 44 -9.879 -10.411 12.671 1.00 27.10 C
ATOM 16 O2 C B 44 -10.690 -10.882 11.923 1.00 32.62 O
ATOM 17 N3 C B 44 -9.045 -9.500 12.229 1.00 28.81 N
ATOM 18 C4 C B 44 -8.151 -8.934 13.028 1.00 27.62 C
ATOM 19 N4 C B 44 -7.398 -8.027 12.386 1.00 26.18 N
ATOM 20 C5 C B 44 -8.002 -9.390 14.363 1.00 26.09 C
ATOM 21 C6 C B 44 -8.835 -10.361 14.813 1.00 31.84 C
ATOM 22 P C B 45 -7.926 -15.881 14.637 1.00 31.45 P
ATOM 23 OP1 C B 45 -7.865 -17.104 15.430 1.00 36.15 O
ATOM 24 OP2 C B 45 -6.675 -15.144 14.401 1.00 37.39 O
ATOM 25 O5' C B 45 -8.439 -16.159 13.124 1.00 33.94 O
TER
ATOM 2 P A A 28 -5.361 -9.595 30.141 1.00 49.89 P
ATOM 3 OP1 A A 28 -4.841 -8.250 29.817 1.00 48.97 O
ATOM 4 OP2 A A 28 -4.962 -10.160 31.472 1.00 49.05 O
ATOM 5 O5' A A 28 -6.940 -9.474 29.912 1.00 41.88 O
ATOM 6 C5' A A 28 -7.804 -9.925 30.928 1.00 44.33 C
ATOM 7 C4' A A 28 -9.237 -9.912 30.463 1.00 44.70 C
ATOM 8 O4' A A 28 -9.423 -9.054 29.304 1.00 45.67 O
ATOM 9 C3' A A 28 -9.623 -11.258 29.943 1.00 41.69 C
ATOM 10 O3' A A 28 -10.062 -11.924 31.063 1.00 45.87 O
ATOM 11 C2' A A 28 -10.829 -10.946 29.066 1.00 44.06 C
ATOM 12 O2' A A 28 -12.092 -10.890 29.744 1.00 41.43 O
ATOM 13 C1' A A 28 -10.431 -9.602 28.475 1.00 43.21 C
ATOM 14 N9 A A 28 -9.892 -9.678 27.110 1.00 45.99 N
ATOM 15 C8 A A 28 -8.717 -9.137 26.642 1.00 44.00 C
ATOM 16 N7 A A 28 -8.499 -9.381 25.322 1.00 41.25 N
ATOM 17 C5 A A 28 -9.617 -10.114 24.928 1.00 43.20 C
ATOM 18 C6 A A 28 -10.022 -10.615 23.652 1.00 41.07 C
ATOM 19 N6 A A 28 -9.263 -10.453 22.535 1.00 35.28 N
ATOM 20 N1 A A 28 -11.195 -11.304 23.619 1.00 41.06 N
ATOM 21 C2 A A 28 -11.919 -11.449 24.727 1.00 40.53 C
ATOM 22 N3 A A 28 -11.638 -10.984 25.949 1.00 41.72 N
ATOM 23 C4 A A 28 -10.469 -10.319 26.001 1.00 45.18 C
ATOM 24 P G A 29 -9.640 -13.435 31.351 1.00 43.67 P
ATOM 25 OP1 G A 29 -10.064 -13.780 32.713 1.00 42.33 O
ATOM 26 OP2 G A 29 -8.198 -13.541 30.978 1.00 45.11 O
ATOM 27 O5' G A 29 -10.625 -14.143 30.280 1.00 42.69 O
TER
ATOM 1 O3' A B 43 -9.948 -10.875 19.598 1.00 32.69 O
ATOM 2 P C B 44 -8.771 -11.912 19.391 1.00 37.69 P
ATOM 3 OP1 C B 44 -8.673 -12.812 20.567 1.00 36.27 O
ATOM 4 OP2 C B 44 -7.573 -11.262 18.876 1.00 27.63 O
ATOM 5 O5' C B 44 -9.557 -12.886 18.366 1.00 36.22 O
ATOM 6 C5' C B 44 -9.154 -12.974 17.127 1.00 35.76 C
ATOM 7 C4' C B 44 -10.268 -13.290 16.174 1.00 31.90 C
ATOM 8 O4' C B 44 -10.765 -12.036 15.673 1.00 30.03 O
ATOM 9 C3' C B 44 -9.460 -13.762 14.996 1.00 33.80 C
ATOM 10 O3' C B 44 -9.210 -15.113 15.249 1.00 32.26 O
ATOM 11 C2' C B 44 -10.367 -13.362 13.843 1.00 34.07 C
ATOM 12 O2' C B 44 -11.511 -14.182 13.892 1.00 33.62 O
ATOM 13 C1' C B 44 -10.747 -11.943 14.286 1.00 29.61 C
ATOM 14 N1 C B 44 -9.797 -10.876 13.951 1.00 28.44 N
ATOM 15 C2 C B 44 -9.879 -10.411 12.671 1.00 27.10 C
ATOM 16 O2 C B 44 -10.690 -10.882 11.923 1.00 32.62 O
ATOM 17 N3 C B 44 -9.045 -9.500 12.229 1.00 28.81 N
ATOM 18 C4 C B 44 -8.151 -8.934 13.028 1.00 27.62 C
ATOM 19 N4 C B 44 -7.398 -8.027 12.386 1.00 26.18 N
ATOM 20 C5 C B 44 -8.002 -9.390 14.363 1.00 26.09 C
ATOM 21 C6 C B 44 -8.835 -10.361 14.813 1.00 31.84 C
ATOM 22 P C B 45 -7.926 -15.881 14.637 1.00 31.45 P
ATOM 23 OP1 C B 45 -7.865 -17.104 15.430 1.00 36.15 O
ATOM 24 OP2 C B 45 -6.675 -15.144 14.401 1.00 37.39 O
ATOM 25 O5' C B 45 -8.439 -16.159 13.124 1.00 33.94 O
TER
Atoms:
OP1: (-4.841,-8.250,29.817)
OP2: (-4.962,-10.160,31.472)
C3': (-9.623,-11.258,29.943)
C1': (-10.431,-9.602,28.475)
C5': (-7.804,-9.925,30.928)
O4': (-9.423,-9.054,29.304)
C8: (-8.717,-9.137,26.642)
O2': (-12.092,-10.890,29.744)
C6: (-10.022,-10.615,23.652)
C5: (-9.617,-10.114,24.928)
C4: (-10.469,-10.319,26.001)
P: (-5.361,-9.595,30.141)
C4': (-9.237,-9.912,30.463)
C2': (-10.829,-10.946,29.066)
C2: (-11.919,-11.449,24.727)
N1: (-11.195,-11.304,23.619)
N3: (-11.638,-10.984,25.949)
N6: (-9.263,-10.453,22.535)
N7: (-8.499,-9.381,25.322)
N9: (-9.892,-9.678,27.110)
O5': (-6.940,-9.474,29.912)
O3': (-10.062,-11.924,31.063)
OP2: (-4.962,-10.160,31.472)
C3': (-9.623,-11.258,29.943)
C1': (-10.431,-9.602,28.475)
C5': (-7.804,-9.925,30.928)
O4': (-9.423,-9.054,29.304)
C8: (-8.717,-9.137,26.642)
O2': (-12.092,-10.890,29.744)
C6: (-10.022,-10.615,23.652)
C5: (-9.617,-10.114,24.928)
C4: (-10.469,-10.319,26.001)
P: (-5.361,-9.595,30.141)
C4': (-9.237,-9.912,30.463)
C2': (-10.829,-10.946,29.066)
C2: (-11.919,-11.449,24.727)
N1: (-11.195,-11.304,23.619)
N3: (-11.638,-10.984,25.949)
N6: (-9.263,-10.453,22.535)
N7: (-8.499,-9.381,25.322)
N9: (-9.892,-9.678,27.110)
O5': (-6.940,-9.474,29.912)
O3': (-10.062,-11.924,31.063)
C2: (-9.879,-10.411,12.671)
OP1: (-8.673,-12.812,20.567)
OP2: (-7.573,-11.262,18.876)
C4: (-8.151,-8.934,13.028)
O5': (-9.557,-12.886,18.366)
C3': (-9.460,-13.762,14.996)
C1': (-10.747,-11.943,14.286)
O4': (-10.765,-12.036,15.673)
C5': (-9.154,-12.974,17.127)
P: (-8.771,-11.912,19.391)
O2: (-10.690,-10.882,11.923)
C4': (-10.268,-13.290,16.174)
C2': (-10.367,-13.362,13.843)
O2': (-11.511,-14.182,13.892)
N1: (-9.797,-10.876,13.951)
N3: (-9.045,-9.500,12.229)
N4: (-7.398,-8.027,12.386)
C6: (-8.835,-10.361,14.813)
C5: (-8.002,-9.390,14.363)
O3': (-9.210,-15.113,15.249)
OP1: (-8.673,-12.812,20.567)
OP2: (-7.573,-11.262,18.876)
C4: (-8.151,-8.934,13.028)
O5': (-9.557,-12.886,18.366)
C3': (-9.460,-13.762,14.996)
C1': (-10.747,-11.943,14.286)
O4': (-10.765,-12.036,15.673)
C5': (-9.154,-12.974,17.127)
P: (-8.771,-11.912,19.391)
O2: (-10.690,-10.882,11.923)
C4': (-10.268,-13.290,16.174)
C2': (-10.367,-13.362,13.843)
O2': (-11.511,-14.182,13.892)
N1: (-9.797,-10.876,13.951)
N3: (-9.045,-9.500,12.229)
N4: (-7.398,-8.027,12.386)
C6: (-8.835,-10.361,14.813)
C5: (-8.002,-9.390,14.363)
O3': (-9.210,-15.113,15.249)
Image (generated by PyMOL):