Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:01082:01197
Extra
PDB:
ATOM 1 O3' U A1081 31.634 102.538 124.571 1.00 36.33 O
ATOM 2 P A A1082 32.222 103.222 123.236 1.00 36.01 P
ATOM 3 OP1 A A1082 32.038 104.700 123.321 1.00 32.48 O
ATOM 4 OP2 A A1082 31.656 102.472 122.083 1.00 35.84 O
ATOM 5 O5' A A1082 33.781 102.920 123.318 1.00 35.96 O
ATOM 6 C5' A A1082 34.269 101.573 123.353 1.00 37.10 C
ATOM 7 C4' A A1082 35.220 101.347 122.208 1.00 40.93 C
ATOM 8 O4' A A1082 36.268 102.356 122.235 1.00 41.55 O
ATOM 9 C3' A A1082 35.931 99.999 122.197 1.00 41.88 C
ATOM 10 O3' A A1082 36.199 99.649 120.839 1.00 44.96 O
ATOM 11 C2' A A1082 37.243 100.332 122.898 1.00 41.75 C
ATOM 12 O2' A A1082 38.275 99.428 122.575 1.00 42.51 O
ATOM 13 C1' A A1082 37.529 101.726 122.332 1.00 40.65 C
ATOM 14 N9 A A1082 38.401 102.591 123.128 1.00 39.89 N
ATOM 15 C8 A A1082 38.828 102.433 124.423 1.00 39.25 C
ATOM 16 N7 A A1082 39.583 103.414 124.853 1.00 40.31 N
ATOM 17 C5 A A1082 39.663 104.275 123.768 1.00 38.99 C
ATOM 18 C6 A A1082 40.308 105.515 123.584 1.00 39.21 C
ATOM 19 N6 A A1082 41.022 106.130 124.532 1.00 38.14 N
ATOM 20 N1 A A1082 40.188 106.112 122.380 1.00 38.09 N
ATOM 21 C2 A A1082 39.470 105.501 121.436 1.00 38.07 C
ATOM 22 N3 A A1082 38.816 104.345 121.488 1.00 38.60 N
ATOM 23 C4 A A1082 38.951 103.776 122.696 1.00 38.44 C
ATOM 24 P A A1083 35.037 99.011 119.923 1.00 47.01 P
ATOM 25 OP1 A A1083 35.435 99.284 118.517 1.00 46.82 O
ATOM 26 OP2 A A1083 33.694 99.438 120.404 1.00 48.54 O
ATOM 27 O5' A A1083 35.152 97.450 120.191 1.00 44.39 O
TER
ATOM 1 O3' U B1196 39.218 110.709 126.110 1.00 40.95 O
ATOM 2 P C B1197 39.999 109.312 126.000 1.00 43.58 P
ATOM 3 OP1 C B1197 40.285 108.894 127.391 1.00 43.75 O
ATOM 4 OP2 C B1197 41.111 109.411 125.022 1.00 47.06 O
ATOM 5 O5' C B1197 38.940 108.285 125.406 1.00 43.94 O
ATOM 6 C5' C B1197 38.204 108.541 124.193 1.00 36.18 C
ATOM 7 C4' C B1197 36.976 107.665 124.186 1.00 32.96 C
ATOM 8 O4' C B1197 36.212 107.950 125.385 1.00 31.78 O
ATOM 9 C3' C B1197 35.971 107.826 123.063 1.00 32.78 C
ATOM 10 O3' C B1197 36.363 107.049 121.935 1.00 35.90 O
ATOM 11 C2' C B1197 34.710 107.227 123.691 1.00 32.20 C
ATOM 12 O2' C B1197 34.687 105.808 123.680 1.00 30.44 O
ATOM 13 C1' C B1197 34.844 107.681 125.149 1.00 29.13 C
ATOM 14 N1 C B1197 34.044 108.873 125.489 1.00 26.08 N
ATOM 15 C2 C B1197 32.661 108.729 125.597 1.00 24.73 C
ATOM 16 O2 C B1197 32.166 107.601 125.475 1.00 26.90 O
ATOM 17 N3 C B1197 31.899 109.813 125.837 1.00 23.43 N
ATOM 18 C4 C B1197 32.469 111.008 125.985 1.00 24.59 C
ATOM 19 N4 C B1197 31.665 112.058 126.180 1.00 25.33 N
ATOM 20 C5 C B1197 33.883 111.181 125.929 1.00 21.39 C
ATOM 21 C6 C B1197 34.626 110.098 125.679 1.00 22.90 C
ATOM 22 P G B1198 36.892 107.763 120.595 1.00 36.69 P
ATOM 23 OP1 G B1198 36.742 106.755 119.510 1.00 33.47 O
ATOM 24 OP2 G B1198 38.232 108.348 120.885 1.00 35.25 O
ATOM 25 O5' G B1198 35.892 108.978 120.348 1.00 33.14 O
TER
ATOM 2 P A A1082 32.222 103.222 123.236 1.00 36.01 P
ATOM 3 OP1 A A1082 32.038 104.700 123.321 1.00 32.48 O
ATOM 4 OP2 A A1082 31.656 102.472 122.083 1.00 35.84 O
ATOM 5 O5' A A1082 33.781 102.920 123.318 1.00 35.96 O
ATOM 6 C5' A A1082 34.269 101.573 123.353 1.00 37.10 C
ATOM 7 C4' A A1082 35.220 101.347 122.208 1.00 40.93 C
ATOM 8 O4' A A1082 36.268 102.356 122.235 1.00 41.55 O
ATOM 9 C3' A A1082 35.931 99.999 122.197 1.00 41.88 C
ATOM 10 O3' A A1082 36.199 99.649 120.839 1.00 44.96 O
ATOM 11 C2' A A1082 37.243 100.332 122.898 1.00 41.75 C
ATOM 12 O2' A A1082 38.275 99.428 122.575 1.00 42.51 O
ATOM 13 C1' A A1082 37.529 101.726 122.332 1.00 40.65 C
ATOM 14 N9 A A1082 38.401 102.591 123.128 1.00 39.89 N
ATOM 15 C8 A A1082 38.828 102.433 124.423 1.00 39.25 C
ATOM 16 N7 A A1082 39.583 103.414 124.853 1.00 40.31 N
ATOM 17 C5 A A1082 39.663 104.275 123.768 1.00 38.99 C
ATOM 18 C6 A A1082 40.308 105.515 123.584 1.00 39.21 C
ATOM 19 N6 A A1082 41.022 106.130 124.532 1.00 38.14 N
ATOM 20 N1 A A1082 40.188 106.112 122.380 1.00 38.09 N
ATOM 21 C2 A A1082 39.470 105.501 121.436 1.00 38.07 C
ATOM 22 N3 A A1082 38.816 104.345 121.488 1.00 38.60 N
ATOM 23 C4 A A1082 38.951 103.776 122.696 1.00 38.44 C
ATOM 24 P A A1083 35.037 99.011 119.923 1.00 47.01 P
ATOM 25 OP1 A A1083 35.435 99.284 118.517 1.00 46.82 O
ATOM 26 OP2 A A1083 33.694 99.438 120.404 1.00 48.54 O
ATOM 27 O5' A A1083 35.152 97.450 120.191 1.00 44.39 O
TER
ATOM 1 O3' U B1196 39.218 110.709 126.110 1.00 40.95 O
ATOM 2 P C B1197 39.999 109.312 126.000 1.00 43.58 P
ATOM 3 OP1 C B1197 40.285 108.894 127.391 1.00 43.75 O
ATOM 4 OP2 C B1197 41.111 109.411 125.022 1.00 47.06 O
ATOM 5 O5' C B1197 38.940 108.285 125.406 1.00 43.94 O
ATOM 6 C5' C B1197 38.204 108.541 124.193 1.00 36.18 C
ATOM 7 C4' C B1197 36.976 107.665 124.186 1.00 32.96 C
ATOM 8 O4' C B1197 36.212 107.950 125.385 1.00 31.78 O
ATOM 9 C3' C B1197 35.971 107.826 123.063 1.00 32.78 C
ATOM 10 O3' C B1197 36.363 107.049 121.935 1.00 35.90 O
ATOM 11 C2' C B1197 34.710 107.227 123.691 1.00 32.20 C
ATOM 12 O2' C B1197 34.687 105.808 123.680 1.00 30.44 O
ATOM 13 C1' C B1197 34.844 107.681 125.149 1.00 29.13 C
ATOM 14 N1 C B1197 34.044 108.873 125.489 1.00 26.08 N
ATOM 15 C2 C B1197 32.661 108.729 125.597 1.00 24.73 C
ATOM 16 O2 C B1197 32.166 107.601 125.475 1.00 26.90 O
ATOM 17 N3 C B1197 31.899 109.813 125.837 1.00 23.43 N
ATOM 18 C4 C B1197 32.469 111.008 125.985 1.00 24.59 C
ATOM 19 N4 C B1197 31.665 112.058 126.180 1.00 25.33 N
ATOM 20 C5 C B1197 33.883 111.181 125.929 1.00 21.39 C
ATOM 21 C6 C B1197 34.626 110.098 125.679 1.00 22.90 C
ATOM 22 P G B1198 36.892 107.763 120.595 1.00 36.69 P
ATOM 23 OP1 G B1198 36.742 106.755 119.510 1.00 33.47 O
ATOM 24 OP2 G B1198 38.232 108.348 120.885 1.00 35.25 O
ATOM 25 O5' G B1198 35.892 108.978 120.348 1.00 33.14 O
TER
Atoms:
OP1: (32.038,104.700,123.321)
OP2: (31.656,102.472,122.083)
C3': (35.931,99.999,122.197)
C1': (37.529,101.726,122.332)
C5': (34.269,101.573,123.353)
O4': (36.268,102.356,122.235)
C8: (38.828,102.433,124.423)
O2': (38.275,99.428,122.575)
C6: (40.308,105.515,123.584)
C5: (39.663,104.275,123.768)
C4: (38.951,103.776,122.696)
P: (32.222,103.222,123.236)
C4': (35.220,101.347,122.208)
C2': (37.243,100.332,122.898)
C2: (39.470,105.501,121.436)
N1: (40.188,106.112,122.380)
N3: (38.816,104.345,121.488)
N6: (41.022,106.130,124.532)
N7: (39.583,103.414,124.853)
N9: (38.401,102.591,123.128)
O5': (33.781,102.920,123.318)
O3': (36.199,99.649,120.839)
OP2: (31.656,102.472,122.083)
C3': (35.931,99.999,122.197)
C1': (37.529,101.726,122.332)
C5': (34.269,101.573,123.353)
O4': (36.268,102.356,122.235)
C8: (38.828,102.433,124.423)
O2': (38.275,99.428,122.575)
C6: (40.308,105.515,123.584)
C5: (39.663,104.275,123.768)
C4: (38.951,103.776,122.696)
P: (32.222,103.222,123.236)
C4': (35.220,101.347,122.208)
C2': (37.243,100.332,122.898)
C2: (39.470,105.501,121.436)
N1: (40.188,106.112,122.380)
N3: (38.816,104.345,121.488)
N6: (41.022,106.130,124.532)
N7: (39.583,103.414,124.853)
N9: (38.401,102.591,123.128)
O5': (33.781,102.920,123.318)
O3': (36.199,99.649,120.839)
C2: (32.661,108.729,125.597)
OP1: (40.285,108.894,127.391)
OP2: (41.111,109.411,125.022)
C4: (32.469,111.008,125.985)
O5': (38.940,108.285,125.406)
C3': (35.971,107.826,123.063)
C1': (34.844,107.681,125.149)
O4': (36.212,107.950,125.385)
C5': (38.204,108.541,124.193)
P: (39.999,109.312,126.000)
O2: (32.166,107.601,125.475)
C4': (36.976,107.665,124.186)
C2': (34.710,107.227,123.691)
O2': (34.687,105.808,123.680)
N1: (34.044,108.873,125.489)
N3: (31.899,109.813,125.837)
N4: (31.665,112.058,126.180)
C6: (34.626,110.098,125.679)
C5: (33.883,111.181,125.929)
O3': (36.363,107.049,121.935)
OP1: (40.285,108.894,127.391)
OP2: (41.111,109.411,125.022)
C4: (32.469,111.008,125.985)
O5': (38.940,108.285,125.406)
C3': (35.971,107.826,123.063)
C1': (34.844,107.681,125.149)
O4': (36.212,107.950,125.385)
C5': (38.204,108.541,124.193)
P: (39.999,109.312,126.000)
O2: (32.166,107.601,125.475)
C4': (36.976,107.665,124.186)
C2': (34.710,107.227,123.691)
O2': (34.687,105.808,123.680)
N1: (34.044,108.873,125.489)
N3: (31.899,109.813,125.837)
N4: (31.665,112.058,126.180)
C6: (34.626,110.098,125.679)
C5: (33.883,111.181,125.929)
O3': (36.363,107.049,121.935)
Image (generated by PyMOL):