ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3D2X:A30:A60

Extra

PDB:
ATOM 1 O3' G A 29 -12.876 -38.090 -1.597 1.00 31.25 O
ATOM 2 P A A 30 -12.118 -36.812 -2.198 1.00 31.04 P
ATOM 3 OP1 A A 30 -13.182 -35.900 -2.700 1.00 32.67 O
ATOM 4 OP2 A A 30 -11.027 -37.241 -3.110 1.00 30.38 O
ATOM 5 O5' A A 30 -11.413 -36.159 -0.927 1.00 31.87 O
ATOM 6 C5' A A 30 -12.168 -35.838 0.247 1.00 31.27 C
ATOM 7 C4' A A 30 -11.502 -34.725 1.019 1.00 31.15 C
ATOM 8 O4' A A 30 -10.280 -35.206 1.645 1.00 30.92 O
ATOM 9 C3' A A 30 -11.136 -33.455 0.252 1.00 31.27 C
ATOM 10 O3' A A 30 -11.462 -32.321 1.052 1.00 31.54 O
ATOM 11 C2' A A 30 -9.615 -33.551 0.126 1.00 31.42 C
ATOM 12 O2' A A 30 -8.968 -32.294 0.064 1.00 31.58 O
ATOM 13 C1' A A 30 -9.259 -34.261 1.430 1.00 31.40 C
ATOM 14 N9 A A 30 -7.951 -34.914 1.514 1.00 31.36 N
ATOM 15 C8 A A 30 -7.120 -35.341 0.512 1.00 32.32 C
ATOM 16 N7 A A 30 -5.974 -35.821 0.943 1.00 32.81 N
ATOM 17 C5 A A 30 -6.068 -35.719 2.324 1.00 31.95 C
ATOM 18 C6 A A 30 -5.178 -36.042 3.364 1.00 32.44 C
ATOM 19 N6 A A 30 -3.960 -36.551 3.170 1.00 33.12 N
ATOM 20 N1 A A 30 -5.587 -35.818 4.632 1.00 33.03 N
ATOM 21 C2 A A 30 -6.801 -35.298 4.829 1.00 32.85 C
ATOM 22 N3 A A 30 -7.721 -34.946 3.940 1.00 33.02 N
ATOM 23 C4 A A 30 -7.288 -35.183 2.689 1.00 32.08 C
ATOM 24 P A A 31 -12.737 -31.417 0.681 1.00 31.83 P
ATOM 25 OP1 A A 31 -13.168 -31.764 -0.687 1.00 31.69 O
ATOM 26 OP2 A A 31 -12.413 -30.002 1.000 1.00 31.89 O
ATOM 27 O5' A A 31 -13.845 -31.874 1.736 1.00 32.28 O
TER

ATOM 1 O3' G B 59 0.196 -37.729 6.240 1.00 29.85 O
ATOM 2 P C B 60 -0.470 -37.437 4.818 1.00 27.69 P
ATOM 3 OP1 C B 60 -0.915 -36.028 4.845 1.00 28.41 O
ATOM 4 OP2 C B 60 -1.442 -38.504 4.490 1.00 26.99 O
ATOM 5 O5' C B 60 0.736 -37.554 3.799 1.00 27.59 O
ATOM 6 C5' C B 60 0.482 -37.902 2.435 1.00 26.88 C
ATOM 7 C4' C B 60 1.699 -38.537 1.839 1.00 26.44 C
ATOM 8 O4' C B 60 2.774 -37.567 1.830 1.00 26.72 O
ATOM 9 C3' C B 60 2.265 -39.699 2.632 1.00 26.69 C
ATOM 10 O3' C B 60 1.605 -40.917 2.368 1.00 26.06 O
ATOM 11 C2' C B 60 3.721 -39.711 2.201 1.00 26.91 C
ATOM 12 O2' C B 60 3.914 -40.327 0.941 1.00 28.76 O
ATOM 13 C1' C B 60 4.007 -38.219 2.069 1.00 26.43 C
ATOM 14 N1 C B 60 4.629 -37.662 3.285 1.00 25.38 N
ATOM 15 C2 C B 60 5.869 -38.169 3.680 1.00 26.00 C
ATOM 16 O2 C B 60 6.383 -39.071 3.002 1.00 26.31 O
ATOM 17 N3 C B 60 6.472 -37.672 4.790 1.00 25.62 N
ATOM 18 C4 C B 60 5.872 -36.717 5.503 1.00 25.37 C
ATOM 19 N4 C B 60 6.490 -36.277 6.597 1.00 24.32 N
ATOM 20 C5 C B 60 4.606 -36.177 5.123 1.00 25.64 C
ATOM 21 C6 C B 60 4.024 -36.675 4.017 1.00 25.98 C
ATOM 22 P C B 61 1.654 -42.085 3.465 1.00 26.11 P
ATOM 23 OP1 C B 61 0.851 -43.213 2.925 1.00 25.03 O
ATOM 24 OP2 C B 61 1.329 -41.517 4.796 1.00 25.53 O
ATOM 25 O5' C B 61 3.191 -42.499 3.501 1.00 25.28 O
TER

Atoms:
OP1: (-13.182,-35.900,-2.700)
OP2: (-11.027,-37.241,-3.110)
C3': (-11.136,-33.455,0.252)
C1': (-9.259,-34.261,1.430)
C5': (-12.168,-35.838,0.247)
O4': (-10.280,-35.206,1.645)
C8: (-7.120,-35.341,0.512)
O2': (-8.968,-32.294,0.064)
C6: (-5.178,-36.042,3.364)
C5: (-6.068,-35.719,2.324)
C4: (-7.288,-35.183,2.689)
P: (-12.118,-36.812,-2.198)
C4': (-11.502,-34.725,1.019)
C2': (-9.615,-33.551,0.126)
C2: (-6.801,-35.298,4.829)
N1: (-5.587,-35.818,4.632)
N3: (-7.721,-34.946,3.940)
N6: (-3.960,-36.551,3.170)
N7: (-5.974,-35.821,0.943)
N9: (-7.951,-34.914,1.514)
O5': (-11.413,-36.159,-0.927)
O3': (-11.462,-32.321,1.052)
C2: (5.869,-38.169,3.680)
OP1: (-0.915,-36.028,4.845)
OP2: (-1.442,-38.504,4.490)
C4: (5.872,-36.717,5.503)
O5': (0.736,-37.554,3.799)
C3': (2.265,-39.699,2.632)
C1': (4.007,-38.219,2.069)
O4': (2.774,-37.567,1.830)
C5': (0.482,-37.902,2.435)
P: (-0.470,-37.437,4.818)
O2: (6.383,-39.071,3.002)
C4': (1.699,-38.537,1.839)
C2': (3.721,-39.711,2.201)
O2': (3.914,-40.327,0.941)
N1: (4.629,-37.662,3.285)
N3: (6.472,-37.672,4.790)
N4: (6.490,-36.277,6.597)
C6: (4.024,-36.675,4.017)
C5: (4.606,-36.177,5.123)
O3': (1.605,-40.917,2.368)
Image (generated by PyMOL):
PyMOL image
show in jmol