Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ8:0575:0558
Extra
PDB:
ATOM 1 O3' C A 574 -13.378 88.187 114.431 1.00 62.45 O
ATOM 2 P A A 575 -13.051 88.800 112.978 1.00 62.96 P
ATOM 3 OP1 A A 575 -12.590 90.205 113.164 1.00 62.72 O
ATOM 4 OP2 A A 575 -14.228 88.524 112.114 1.00 63.07 O
ATOM 5 O5' A A 575 -11.853 87.909 112.426 1.00 60.63 O
ATOM 6 C5' A A 575 -11.642 87.757 111.006 1.00 59.76 C
ATOM 7 C4' A A 575 -10.195 87.418 110.722 1.00 58.25 C
ATOM 8 O4' A A 575 -9.360 88.504 111.210 1.00 57.32 O
ATOM 9 C3' A A 575 -9.661 86.152 111.381 1.00 57.73 C
ATOM 10 O3' A A 575 -8.682 85.584 110.526 1.00 58.70 O
ATOM 11 C2' A A 575 -9.000 86.688 112.649 1.00 58.09 C
ATOM 12 O2' A A 575 -7.970 85.850 113.144 1.00 59.00 O
ATOM 13 C1' A A 575 -8.422 88.005 112.139 1.00 56.67 C
ATOM 14 N9 A A 575 -8.196 89.030 113.159 1.00 56.20 N
ATOM 15 C8 A A 575 -9.132 89.766 113.844 1.00 56.59 C
ATOM 16 N7 A A 575 -8.614 90.639 114.674 1.00 56.20 N
ATOM 17 C5 A A 575 -7.243 90.462 114.535 1.00 54.75 C
ATOM 18 C6 A A 575 -6.139 91.092 115.143 1.00 54.98 C
ATOM 19 N6 A A 575 -6.248 92.060 116.062 1.00 55.61 N
ATOM 20 N1 A A 575 -4.904 90.688 114.774 1.00 53.98 N
ATOM 21 C2 A A 575 -4.796 89.708 113.864 1.00 54.75 C
ATOM 22 N3 A A 575 -5.755 89.035 113.229 1.00 54.23 N
ATOM 23 C4 A A 575 -6.971 89.468 113.611 1.00 55.21 C
ATOM 24 P G A 576 -9.021 84.253 109.700 1.00 60.56 P
ATOM 25 OP1 G A 576 -10.452 83.938 109.933 1.00 64.98 O
ATOM 26 OP2 G A 576 -7.994 83.229 109.992 1.00 62.18 O
ATOM 27 O5' G A 576 -8.880 84.697 108.173 1.00 61.88 O
TER
ATOM 1 O3' A B 557 -2.470 94.429 117.521 1.00 52.64 O
ATOM 2 P C B 558 -3.378 93.991 118.769 1.00 54.48 P
ATOM 3 OP1 C B 558 -2.462 93.448 119.814 1.00 54.90 O
ATOM 4 OP2 C B 558 -4.500 93.149 118.264 1.00 54.54 O
ATOM 5 O5' C B 558 -3.973 95.377 119.274 1.00 53.47 O
ATOM 6 C5' C B 558 -3.103 96.494 119.512 1.00 55.23 C
ATOM 7 C4' C B 558 -3.910 97.754 119.680 1.00 57.26 C
ATOM 8 O4' C B 558 -4.698 97.967 118.481 1.00 57.71 O
ATOM 9 C3' C B 558 -4.940 97.720 120.795 1.00 58.55 C
ATOM 10 O3' C B 558 -4.360 98.016 122.061 1.00 61.84 O
ATOM 11 C2' C B 558 -5.931 98.779 120.342 1.00 57.79 C
ATOM 12 O2' C B 558 -5.453 100.086 120.583 1.00 57.22 O
ATOM 13 C1' C B 558 -5.955 98.526 118.833 1.00 57.57 C
ATOM 14 N1 C B 558 -7.019 97.595 118.403 1.00 56.97 N
ATOM 15 C2 C B 558 -8.335 98.069 118.307 1.00 57.26 C
ATOM 16 O2 C B 558 -8.573 99.252 118.617 1.00 60.26 O
ATOM 17 N3 C B 558 -9.312 97.231 117.887 1.00 56.40 N
ATOM 18 C4 C B 558 -9.020 95.966 117.578 1.00 55.84 C
ATOM 19 N4 C B 558 -10.017 95.175 117.166 1.00 54.32 N
ATOM 20 C5 C B 558 -7.694 95.453 117.678 1.00 56.40 C
ATOM 21 C6 C B 558 -6.734 96.293 118.091 1.00 56.77 C
ATOM 22 P C B 559 -4.733 97.108 123.337 1.00 63.47 P
ATOM 23 OP1 C B 559 -4.118 97.739 124.538 1.00 63.07 O
ATOM 24 OP2 C B 559 -4.439 95.681 123.020 1.00 60.62 O
ATOM 25 O5' C B 559 -6.310 97.276 123.453 1.00 64.04 O
TER
ATOM 2 P A A 575 -13.051 88.800 112.978 1.00 62.96 P
ATOM 3 OP1 A A 575 -12.590 90.205 113.164 1.00 62.72 O
ATOM 4 OP2 A A 575 -14.228 88.524 112.114 1.00 63.07 O
ATOM 5 O5' A A 575 -11.853 87.909 112.426 1.00 60.63 O
ATOM 6 C5' A A 575 -11.642 87.757 111.006 1.00 59.76 C
ATOM 7 C4' A A 575 -10.195 87.418 110.722 1.00 58.25 C
ATOM 8 O4' A A 575 -9.360 88.504 111.210 1.00 57.32 O
ATOM 9 C3' A A 575 -9.661 86.152 111.381 1.00 57.73 C
ATOM 10 O3' A A 575 -8.682 85.584 110.526 1.00 58.70 O
ATOM 11 C2' A A 575 -9.000 86.688 112.649 1.00 58.09 C
ATOM 12 O2' A A 575 -7.970 85.850 113.144 1.00 59.00 O
ATOM 13 C1' A A 575 -8.422 88.005 112.139 1.00 56.67 C
ATOM 14 N9 A A 575 -8.196 89.030 113.159 1.00 56.20 N
ATOM 15 C8 A A 575 -9.132 89.766 113.844 1.00 56.59 C
ATOM 16 N7 A A 575 -8.614 90.639 114.674 1.00 56.20 N
ATOM 17 C5 A A 575 -7.243 90.462 114.535 1.00 54.75 C
ATOM 18 C6 A A 575 -6.139 91.092 115.143 1.00 54.98 C
ATOM 19 N6 A A 575 -6.248 92.060 116.062 1.00 55.61 N
ATOM 20 N1 A A 575 -4.904 90.688 114.774 1.00 53.98 N
ATOM 21 C2 A A 575 -4.796 89.708 113.864 1.00 54.75 C
ATOM 22 N3 A A 575 -5.755 89.035 113.229 1.00 54.23 N
ATOM 23 C4 A A 575 -6.971 89.468 113.611 1.00 55.21 C
ATOM 24 P G A 576 -9.021 84.253 109.700 1.00 60.56 P
ATOM 25 OP1 G A 576 -10.452 83.938 109.933 1.00 64.98 O
ATOM 26 OP2 G A 576 -7.994 83.229 109.992 1.00 62.18 O
ATOM 27 O5' G A 576 -8.880 84.697 108.173 1.00 61.88 O
TER
ATOM 1 O3' A B 557 -2.470 94.429 117.521 1.00 52.64 O
ATOM 2 P C B 558 -3.378 93.991 118.769 1.00 54.48 P
ATOM 3 OP1 C B 558 -2.462 93.448 119.814 1.00 54.90 O
ATOM 4 OP2 C B 558 -4.500 93.149 118.264 1.00 54.54 O
ATOM 5 O5' C B 558 -3.973 95.377 119.274 1.00 53.47 O
ATOM 6 C5' C B 558 -3.103 96.494 119.512 1.00 55.23 C
ATOM 7 C4' C B 558 -3.910 97.754 119.680 1.00 57.26 C
ATOM 8 O4' C B 558 -4.698 97.967 118.481 1.00 57.71 O
ATOM 9 C3' C B 558 -4.940 97.720 120.795 1.00 58.55 C
ATOM 10 O3' C B 558 -4.360 98.016 122.061 1.00 61.84 O
ATOM 11 C2' C B 558 -5.931 98.779 120.342 1.00 57.79 C
ATOM 12 O2' C B 558 -5.453 100.086 120.583 1.00 57.22 O
ATOM 13 C1' C B 558 -5.955 98.526 118.833 1.00 57.57 C
ATOM 14 N1 C B 558 -7.019 97.595 118.403 1.00 56.97 N
ATOM 15 C2 C B 558 -8.335 98.069 118.307 1.00 57.26 C
ATOM 16 O2 C B 558 -8.573 99.252 118.617 1.00 60.26 O
ATOM 17 N3 C B 558 -9.312 97.231 117.887 1.00 56.40 N
ATOM 18 C4 C B 558 -9.020 95.966 117.578 1.00 55.84 C
ATOM 19 N4 C B 558 -10.017 95.175 117.166 1.00 54.32 N
ATOM 20 C5 C B 558 -7.694 95.453 117.678 1.00 56.40 C
ATOM 21 C6 C B 558 -6.734 96.293 118.091 1.00 56.77 C
ATOM 22 P C B 559 -4.733 97.108 123.337 1.00 63.47 P
ATOM 23 OP1 C B 559 -4.118 97.739 124.538 1.00 63.07 O
ATOM 24 OP2 C B 559 -4.439 95.681 123.020 1.00 60.62 O
ATOM 25 O5' C B 559 -6.310 97.276 123.453 1.00 64.04 O
TER
Atoms:
OP1: (-12.590,90.205,113.164)
OP2: (-14.228,88.524,112.114)
C3': (-9.661,86.152,111.381)
C1': (-8.422,88.005,112.139)
C5': (-11.642,87.757,111.006)
O4': (-9.360,88.504,111.210)
C8: (-9.132,89.766,113.844)
O2': (-7.970,85.850,113.144)
C6: (-6.139,91.092,115.143)
C5: (-7.243,90.462,114.535)
C4: (-6.971,89.468,113.611)
P: (-13.051,88.800,112.978)
C4': (-10.195,87.418,110.722)
C2': (-9.000,86.688,112.649)
C2: (-4.796,89.708,113.864)
N1: (-4.904,90.688,114.774)
N3: (-5.755,89.035,113.229)
N6: (-6.248,92.060,116.062)
N7: (-8.614,90.639,114.674)
N9: (-8.196,89.030,113.159)
O5': (-11.853,87.909,112.426)
O3': (-8.682,85.584,110.526)
OP2: (-14.228,88.524,112.114)
C3': (-9.661,86.152,111.381)
C1': (-8.422,88.005,112.139)
C5': (-11.642,87.757,111.006)
O4': (-9.360,88.504,111.210)
C8: (-9.132,89.766,113.844)
O2': (-7.970,85.850,113.144)
C6: (-6.139,91.092,115.143)
C5: (-7.243,90.462,114.535)
C4: (-6.971,89.468,113.611)
P: (-13.051,88.800,112.978)
C4': (-10.195,87.418,110.722)
C2': (-9.000,86.688,112.649)
C2: (-4.796,89.708,113.864)
N1: (-4.904,90.688,114.774)
N3: (-5.755,89.035,113.229)
N6: (-6.248,92.060,116.062)
N7: (-8.614,90.639,114.674)
N9: (-8.196,89.030,113.159)
O5': (-11.853,87.909,112.426)
O3': (-8.682,85.584,110.526)
C2: (-8.335,98.069,118.307)
OP1: (-2.462,93.448,119.814)
OP2: (-4.500,93.149,118.264)
C4: (-9.020,95.966,117.578)
O5': (-3.973,95.377,119.274)
C3': (-4.940,97.720,120.795)
C1': (-5.955,98.526,118.833)
O4': (-4.698,97.967,118.481)
C5': (-3.103,96.494,119.512)
P: (-3.378,93.991,118.769)
O2: (-8.573,99.252,118.617)
C4': (-3.910,97.754,119.680)
C2': (-5.931,98.779,120.342)
O2': (-5.453,100.086,120.583)
N1: (-7.019,97.595,118.403)
N3: (-9.312,97.231,117.887)
N4: (-10.017,95.175,117.166)
C6: (-6.734,96.293,118.091)
C5: (-7.694,95.453,117.678)
O3': (-4.360,98.016,122.061)
OP1: (-2.462,93.448,119.814)
OP2: (-4.500,93.149,118.264)
C4: (-9.020,95.966,117.578)
O5': (-3.973,95.377,119.274)
C3': (-4.940,97.720,120.795)
C1': (-5.955,98.526,118.833)
O4': (-4.698,97.967,118.481)
C5': (-3.103,96.494,119.512)
P: (-3.378,93.991,118.769)
O2: (-8.573,99.252,118.617)
C4': (-3.910,97.754,119.680)
C2': (-5.931,98.779,120.342)
O2': (-5.453,100.086,120.583)
N1: (-7.019,97.595,118.403)
N3: (-9.312,97.231,117.887)
N4: (-10.017,95.175,117.166)
C6: (-6.734,96.293,118.091)
C5: (-7.694,95.453,117.678)
O3': (-4.360,98.016,122.061)
Image (generated by PyMOL):