ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHJ:A1854:A1855

Extra

PDB:
ATOM 1 O3' A A1853 79.286 -21.549 4.514 1.00 44.63 O
ATOM 2 P A A1854 77.938 -22.421 4.570 1.00 45.75 P
ATOM 3 OP1 A A1854 76.838 -21.569 4.052 1.00 42.39 O
ATOM 4 OP2 A A1854 77.817 -22.980 5.960 1.00 45.12 O
ATOM 5 O5' A A1854 78.241 -23.587 3.532 1.00 48.90 O
ATOM 6 C5' A A1854 77.282 -23.949 2.550 1.00 48.81 C
ATOM 7 C4' A A1854 77.640 -25.246 1.879 1.00 43.50 C
ATOM 8 O4' A A1854 76.460 -25.763 1.198 1.00 54.67 O
ATOM 9 C3' A A1854 78.737 -25.145 0.824 1.00 43.13 C
ATOM 10 O3' A A1854 79.620 -26.261 0.919 1.00 43.25 O
ATOM 11 C2' A A1854 77.963 -25.203 -0.488 1.00 45.27 C
ATOM 12 O2' A A1854 78.683 -25.712 -1.580 1.00 54.80 O
ATOM 13 C1' A A1854 76.792 -26.099 -0.128 1.00 49.36 C
ATOM 14 N9 A A1854 75.628 -25.886 -0.990 1.00 42.45 N
ATOM 15 C8 A A1854 75.087 -24.673 -1.264 1.00 45.87 C
ATOM 16 N7 A A1854 74.108 -24.709 -2.111 1.00 44.09 N
ATOM 17 C5 A A1854 74.003 -26.037 -2.436 1.00 43.09 C
ATOM 18 C6 A A1854 73.118 -26.689 -3.302 1.00 42.82 C
ATOM 19 N6 A A1854 72.180 -26.051 -4.013 1.00 39.28 N
ATOM 20 N1 A A1854 73.248 -28.019 -3.409 1.00 42.18 N
ATOM 21 C2 A A1854 74.209 -28.608 -2.675 1.00 43.47 C
ATOM 22 N3 A A1854 75.096 -28.102 -1.824 1.00 40.54 N
ATOM 23 C4 A A1854 74.941 -26.780 -1.762 1.00 41.45 C
ATOM 24 P U A1855 81.055 -26.097 1.650 1.00 46.20 P
ATOM 25 OP1 U A1855 81.623 -27.436 1.781 1.00 51.61 O
ATOM 26 OP2 U A1855 80.831 -25.310 2.873 1.00 55.29 O
ATOM 27 O5' U A1855 81.922 -25.249 0.606 1.00 40.34 O
TER

ATOM 1 O3' A B1854 79.620 -26.261 0.919 1.00 43.25 O
ATOM 2 P U B1855 81.055 -26.097 1.650 1.00 46.20 P
ATOM 3 OP1 U B1855 81.623 -27.436 1.781 1.00 51.61 O
ATOM 4 OP2 U B1855 80.831 -25.310 2.873 1.00 55.29 O
ATOM 5 O5' U B1855 81.922 -25.249 0.606 1.00 40.34 O
ATOM 6 C5' U B1855 82.572 -25.900 -0.480 1.00 36.69 C
ATOM 7 C4' U B1855 83.608 -25.028 -1.144 1.00 36.55 C
ATOM 8 O4' U B1855 82.999 -23.782 -1.559 1.00 35.60 O
ATOM 9 C3' U B1855 84.823 -24.653 -0.282 1.00 48.94 C
ATOM 10 O3' U B1855 86.018 -24.773 -1.054 1.00 41.96 O
ATOM 11 C2' U B1855 84.585 -23.179 0.050 1.00 44.81 C
ATOM 12 O2' U B1855 85.764 -22.429 0.251 1.00 41.35 O
ATOM 13 C1' U B1855 83.826 -22.703 -1.180 1.00 35.20 C
ATOM 14 N1 U B1855 82.975 -21.551 -0.927 1.00 35.80 N
ATOM 15 C2 U B1855 83.321 -20.366 -1.544 1.00 35.06 C
ATOM 16 O2 U B1855 84.283 -20.295 -2.285 1.00 32.89 O
ATOM 17 N3 U B1855 82.489 -19.312 -1.256 1.00 28.64 N
ATOM 18 C4 U B1855 81.375 -19.403 -0.448 1.00 30.26 C
ATOM 19 O4 U B1855 80.688 -18.414 -0.284 1.00 44.65 O
ATOM 20 C5 U B1855 81.094 -20.662 0.156 1.00 30.41 C
ATOM 21 C6 U B1855 81.896 -21.690 -0.095 1.00 33.88 C
ATOM 22 P U B1856 86.970 -26.043 -0.838 1.00 45.37 P
ATOM 23 OP1 U B1856 88.070 -25.933 -1.819 1.00 47.13 O
ATOM 24 OP2 U B1856 86.120 -27.244 -0.869 1.00 52.40 O
ATOM 25 O5' U B1856 87.508 -25.817 0.638 1.00 51.06 O
TER

Atoms:
OP1: (76.838,-21.569,4.052)
OP2: (77.817,-22.980,5.960)
C3': (78.737,-25.145,0.824)
C1': (76.792,-26.099,-0.128)
C5': (77.282,-23.949,2.550)
O4': (76.460,-25.763,1.198)
C8: (75.087,-24.673,-1.264)
O2': (78.683,-25.712,-1.580)
C6: (73.118,-26.689,-3.302)
C5: (74.003,-26.037,-2.436)
C4: (74.941,-26.780,-1.762)
P: (77.938,-22.421,4.570)
C4': (77.640,-25.246,1.879)
C2': (77.963,-25.203,-0.488)
C2: (74.209,-28.608,-2.675)
N1: (73.248,-28.019,-3.409)
N3: (75.096,-28.102,-1.824)
N6: (72.180,-26.051,-4.013)
N7: (74.108,-24.709,-2.111)
N9: (75.628,-25.886,-0.990)
O5': (78.241,-23.587,3.532)
O3': (79.620,-26.261,0.919)
C4: (81.375,-19.403,-0.448)
N3: (82.489,-19.312,-1.256)
OP1: (81.623,-27.436,1.781)
OP2: (80.831,-25.310,2.873)
C2: (83.321,-20.366,-1.544)
C1': (83.826,-22.703,-1.180)
C3': (84.823,-24.653,-0.282)
O5': (81.922,-25.249,0.606)
O4': (82.999,-23.782,-1.559)
C5': (82.572,-25.900,-0.480)
P: (81.055,-26.097,1.650)
C4': (83.608,-25.028,-1.144)
C2': (84.585,-23.179,0.050)
O2': (85.764,-22.429,0.251)
N1: (82.975,-21.551,-0.927)
O4: (80.688,-18.414,-0.284)
O2: (84.283,-20.295,-2.285)
C6: (81.896,-21.690,-0.095)
C5: (81.094,-20.662,0.156)
O3': (86.018,-24.773,-1.054)
Image (generated by PyMOL):
PyMOL image
show in jmol