Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0575:0558
Extra
PDB:
ATOM 1 O3' C A 574 -13.455 89.683 114.504 1.00 65.92 O
ATOM 2 P A A 575 -13.180 90.361 113.078 1.00 67.86 P
ATOM 3 OP1 A A 575 -12.644 91.728 113.317 1.00 67.93 O
ATOM 4 OP2 A A 575 -14.400 90.189 112.250 1.00 68.03 O
ATOM 5 O5' A A 575 -12.037 89.452 112.447 1.00 66.41 O
ATOM 6 C5' A A 575 -11.857 89.392 111.031 1.00 67.00 C
ATOM 7 C4' A A 575 -10.415 89.102 110.696 1.00 66.93 C
ATOM 8 O4' A A 575 -9.575 90.184 111.185 1.00 67.51 O
ATOM 9 C3' A A 575 -9.832 87.822 111.275 1.00 66.37 C
ATOM 10 O3' A A 575 -8.943 87.285 110.318 1.00 67.10 O
ATOM 11 C2' A A 575 -9.069 88.316 112.501 1.00 66.29 C
ATOM 12 O2' A A 575 -7.983 87.487 112.855 1.00 65.76 O
ATOM 13 C1' A A 575 -8.552 89.659 112.005 1.00 66.34 C
ATOM 14 N9 A A 575 -8.257 90.625 113.065 1.00 66.01 N
ATOM 15 C8 A A 575 -9.137 91.342 113.843 1.00 65.94 C
ATOM 16 N7 A A 575 -8.552 92.158 114.689 1.00 65.74 N
ATOM 17 C5 A A 575 -7.195 91.961 114.458 1.00 65.10 C
ATOM 18 C6 A A 575 -6.039 92.532 115.032 1.00 63.63 C
ATOM 19 N6 A A 575 -6.064 93.462 115.992 1.00 62.33 N
ATOM 20 N1 A A 575 -4.841 92.109 114.577 1.00 62.63 N
ATOM 21 C2 A A 575 -4.810 91.182 113.611 1.00 62.94 C
ATOM 22 N3 A A 575 -5.819 90.575 112.992 1.00 63.81 N
ATOM 23 C4 A A 575 -6.999 91.013 113.467 1.00 65.35 C
ATOM 24 P G A 576 -9.249 85.850 109.676 1.00 69.56 P
ATOM 25 OP1 G A 576 -10.719 85.663 109.737 1.00 71.65 O
ATOM 26 OP2 G A 576 -8.353 84.856 110.327 1.00 68.96 O
ATOM 27 O5' G A 576 -8.850 86.014 108.137 1.00 69.21 O
TER
ATOM 1 O3' A B 557 -2.288 95.797 117.285 1.00 57.23 O
ATOM 2 P C B 558 -3.175 95.526 118.596 1.00 57.98 P
ATOM 3 OP1 C B 558 -2.241 95.227 119.711 1.00 58.37 O
ATOM 4 OP2 C B 558 -4.237 94.542 118.246 1.00 57.36 O
ATOM 5 O5' C B 558 -3.827 96.945 118.893 1.00 56.81 O
ATOM 6 C5' C B 558 -2.989 98.082 119.131 1.00 60.56 C
ATOM 7 C4' C B 558 -3.824 99.309 119.363 1.00 63.59 C
ATOM 8 O4' C B 558 -4.609 99.590 118.177 1.00 64.03 O
ATOM 9 C3' C B 558 -4.859 99.184 120.464 1.00 65.96 C
ATOM 10 O3' C B 558 -4.279 99.376 121.747 1.00 70.73 O
ATOM 11 C2' C B 558 -5.855 100.265 120.074 1.00 65.11 C
ATOM 12 O2' C B 558 -5.390 101.566 120.378 1.00 64.59 O
ATOM 13 C1' C B 558 -5.882 100.091 118.554 1.00 64.00 C
ATOM 14 N1 C B 558 -6.903 99.122 118.114 1.00 63.77 N
ATOM 15 C2 C B 558 -8.227 99.558 117.933 1.00 64.48 C
ATOM 16 O2 C B 558 -8.508 100.757 118.136 1.00 65.32 O
ATOM 17 N3 C B 558 -9.165 98.660 117.544 1.00 63.41 N
ATOM 18 C4 C B 558 -8.827 97.384 117.343 1.00 62.68 C
ATOM 19 N4 C B 558 -9.785 96.529 116.979 1.00 62.79 N
ATOM 20 C5 C B 558 -7.491 96.922 117.509 1.00 62.68 C
ATOM 21 C6 C B 558 -6.572 97.813 117.890 1.00 62.69 C
ATOM 22 P C B 559 -4.644 98.363 122.942 1.00 73.33 P
ATOM 23 OP1 C B 559 -3.929 98.840 124.159 1.00 72.22 O
ATOM 24 OP2 C B 559 -4.435 96.966 122.465 1.00 71.30 O
ATOM 25 O5' C B 559 -6.205 98.594 123.155 1.00 73.39 O
TER
ATOM 2 P A A 575 -13.180 90.361 113.078 1.00 67.86 P
ATOM 3 OP1 A A 575 -12.644 91.728 113.317 1.00 67.93 O
ATOM 4 OP2 A A 575 -14.400 90.189 112.250 1.00 68.03 O
ATOM 5 O5' A A 575 -12.037 89.452 112.447 1.00 66.41 O
ATOM 6 C5' A A 575 -11.857 89.392 111.031 1.00 67.00 C
ATOM 7 C4' A A 575 -10.415 89.102 110.696 1.00 66.93 C
ATOM 8 O4' A A 575 -9.575 90.184 111.185 1.00 67.51 O
ATOM 9 C3' A A 575 -9.832 87.822 111.275 1.00 66.37 C
ATOM 10 O3' A A 575 -8.943 87.285 110.318 1.00 67.10 O
ATOM 11 C2' A A 575 -9.069 88.316 112.501 1.00 66.29 C
ATOM 12 O2' A A 575 -7.983 87.487 112.855 1.00 65.76 O
ATOM 13 C1' A A 575 -8.552 89.659 112.005 1.00 66.34 C
ATOM 14 N9 A A 575 -8.257 90.625 113.065 1.00 66.01 N
ATOM 15 C8 A A 575 -9.137 91.342 113.843 1.00 65.94 C
ATOM 16 N7 A A 575 -8.552 92.158 114.689 1.00 65.74 N
ATOM 17 C5 A A 575 -7.195 91.961 114.458 1.00 65.10 C
ATOM 18 C6 A A 575 -6.039 92.532 115.032 1.00 63.63 C
ATOM 19 N6 A A 575 -6.064 93.462 115.992 1.00 62.33 N
ATOM 20 N1 A A 575 -4.841 92.109 114.577 1.00 62.63 N
ATOM 21 C2 A A 575 -4.810 91.182 113.611 1.00 62.94 C
ATOM 22 N3 A A 575 -5.819 90.575 112.992 1.00 63.81 N
ATOM 23 C4 A A 575 -6.999 91.013 113.467 1.00 65.35 C
ATOM 24 P G A 576 -9.249 85.850 109.676 1.00 69.56 P
ATOM 25 OP1 G A 576 -10.719 85.663 109.737 1.00 71.65 O
ATOM 26 OP2 G A 576 -8.353 84.856 110.327 1.00 68.96 O
ATOM 27 O5' G A 576 -8.850 86.014 108.137 1.00 69.21 O
TER
ATOM 1 O3' A B 557 -2.288 95.797 117.285 1.00 57.23 O
ATOM 2 P C B 558 -3.175 95.526 118.596 1.00 57.98 P
ATOM 3 OP1 C B 558 -2.241 95.227 119.711 1.00 58.37 O
ATOM 4 OP2 C B 558 -4.237 94.542 118.246 1.00 57.36 O
ATOM 5 O5' C B 558 -3.827 96.945 118.893 1.00 56.81 O
ATOM 6 C5' C B 558 -2.989 98.082 119.131 1.00 60.56 C
ATOM 7 C4' C B 558 -3.824 99.309 119.363 1.00 63.59 C
ATOM 8 O4' C B 558 -4.609 99.590 118.177 1.00 64.03 O
ATOM 9 C3' C B 558 -4.859 99.184 120.464 1.00 65.96 C
ATOM 10 O3' C B 558 -4.279 99.376 121.747 1.00 70.73 O
ATOM 11 C2' C B 558 -5.855 100.265 120.074 1.00 65.11 C
ATOM 12 O2' C B 558 -5.390 101.566 120.378 1.00 64.59 O
ATOM 13 C1' C B 558 -5.882 100.091 118.554 1.00 64.00 C
ATOM 14 N1 C B 558 -6.903 99.122 118.114 1.00 63.77 N
ATOM 15 C2 C B 558 -8.227 99.558 117.933 1.00 64.48 C
ATOM 16 O2 C B 558 -8.508 100.757 118.136 1.00 65.32 O
ATOM 17 N3 C B 558 -9.165 98.660 117.544 1.00 63.41 N
ATOM 18 C4 C B 558 -8.827 97.384 117.343 1.00 62.68 C
ATOM 19 N4 C B 558 -9.785 96.529 116.979 1.00 62.79 N
ATOM 20 C5 C B 558 -7.491 96.922 117.509 1.00 62.68 C
ATOM 21 C6 C B 558 -6.572 97.813 117.890 1.00 62.69 C
ATOM 22 P C B 559 -4.644 98.363 122.942 1.00 73.33 P
ATOM 23 OP1 C B 559 -3.929 98.840 124.159 1.00 72.22 O
ATOM 24 OP2 C B 559 -4.435 96.966 122.465 1.00 71.30 O
ATOM 25 O5' C B 559 -6.205 98.594 123.155 1.00 73.39 O
TER
Atoms:
OP1: (-12.644,91.728,113.317)
OP2: (-14.400,90.189,112.250)
C3': (-9.832,87.822,111.275)
C1': (-8.552,89.659,112.005)
C5': (-11.857,89.392,111.031)
O4': (-9.575,90.184,111.185)
C8: (-9.137,91.342,113.843)
O2': (-7.983,87.487,112.855)
C6: (-6.039,92.532,115.032)
C5: (-7.195,91.961,114.458)
C4: (-6.999,91.013,113.467)
P: (-13.180,90.361,113.078)
C4': (-10.415,89.102,110.696)
C2': (-9.069,88.316,112.501)
C2: (-4.810,91.182,113.611)
N1: (-4.841,92.109,114.577)
N3: (-5.819,90.575,112.992)
N6: (-6.064,93.462,115.992)
N7: (-8.552,92.158,114.689)
N9: (-8.257,90.625,113.065)
O5': (-12.037,89.452,112.447)
O3': (-8.943,87.285,110.318)
OP2: (-14.400,90.189,112.250)
C3': (-9.832,87.822,111.275)
C1': (-8.552,89.659,112.005)
C5': (-11.857,89.392,111.031)
O4': (-9.575,90.184,111.185)
C8: (-9.137,91.342,113.843)
O2': (-7.983,87.487,112.855)
C6: (-6.039,92.532,115.032)
C5: (-7.195,91.961,114.458)
C4: (-6.999,91.013,113.467)
P: (-13.180,90.361,113.078)
C4': (-10.415,89.102,110.696)
C2': (-9.069,88.316,112.501)
C2: (-4.810,91.182,113.611)
N1: (-4.841,92.109,114.577)
N3: (-5.819,90.575,112.992)
N6: (-6.064,93.462,115.992)
N7: (-8.552,92.158,114.689)
N9: (-8.257,90.625,113.065)
O5': (-12.037,89.452,112.447)
O3': (-8.943,87.285,110.318)
C2: (-8.227,99.558,117.933)
OP1: (-2.241,95.227,119.711)
OP2: (-4.237,94.542,118.246)
C4: (-8.827,97.384,117.343)
O5': (-3.827,96.945,118.893)
C3': (-4.859,99.184,120.464)
C1': (-5.882,100.091,118.554)
O4': (-4.609,99.590,118.177)
C5': (-2.989,98.082,119.131)
P: (-3.175,95.526,118.596)
O2: (-8.508,100.757,118.136)
C4': (-3.824,99.309,119.363)
C2': (-5.855,100.265,120.074)
O2': (-5.390,101.566,120.378)
N1: (-6.903,99.122,118.114)
N3: (-9.165,98.660,117.544)
N4: (-9.785,96.529,116.979)
C6: (-6.572,97.813,117.890)
C5: (-7.491,96.922,117.509)
O3': (-4.279,99.376,121.747)
OP1: (-2.241,95.227,119.711)
OP2: (-4.237,94.542,118.246)
C4: (-8.827,97.384,117.343)
O5': (-3.827,96.945,118.893)
C3': (-4.859,99.184,120.464)
C1': (-5.882,100.091,118.554)
O4': (-4.609,99.590,118.177)
C5': (-2.989,98.082,119.131)
P: (-3.175,95.526,118.596)
O2: (-8.508,100.757,118.136)
C4': (-3.824,99.309,119.363)
C2': (-5.855,100.265,120.074)
O2': (-5.390,101.566,120.378)
N1: (-6.903,99.122,118.114)
N3: (-9.165,98.660,117.544)
N4: (-9.785,96.529,116.979)
C6: (-6.572,97.813,117.890)
C5: (-7.491,96.922,117.509)
O3': (-4.279,99.376,121.747)
Image (generated by PyMOL):