Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:964:9112
Extra
PDB:
ATOM 1 O3' C A 63 53.548 30.230 125.357 1.00 71.87 O
ATOM 2 P A A 64 52.695 31.592 125.289 1.00 73.77 P
ATOM 3 OP1 A A 64 52.374 31.985 126.687 1.00 74.84 O
ATOM 4 OP2 A A 64 51.588 31.424 124.306 1.00 72.11 O
ATOM 5 O5' A A 64 53.730 32.667 124.729 1.00 75.47 O
ATOM 6 C5' A A 64 55.059 32.799 125.293 1.00 78.15 C
ATOM 7 C4' A A 64 55.670 34.120 124.881 1.00 79.75 C
ATOM 8 O4' A A 64 55.769 34.182 123.439 1.00 80.62 O
ATOM 9 C3' A A 64 54.865 35.332 125.316 1.00 79.67 C
ATOM 10 O3' A A 64 55.306 35.616 126.663 1.00 79.23 O
ATOM 11 C2' A A 64 55.084 36.351 124.189 1.00 80.06 C
ATOM 12 O2' A A 64 56.235 37.154 124.339 1.00 83.33 O
ATOM 13 C1' A A 64 55.328 35.441 122.978 1.00 80.11 C
ATOM 14 N9 A A 64 54.280 35.197 121.985 1.00 79.66 N
ATOM 15 C8 A A 64 53.046 34.614 122.138 1.00 79.33 C
ATOM 16 N7 A A 64 52.410 34.420 121.007 1.00 78.28 N
ATOM 17 C5 A A 64 53.270 34.941 120.048 1.00 79.00 C
ATOM 18 C6 A A 64 53.194 35.026 118.644 1.00 79.13 C
ATOM 19 N6 A A 64 52.177 34.550 117.923 1.00 80.79 N
ATOM 20 N1 A A 64 54.219 35.615 117.994 1.00 78.38 N
ATOM 21 C2 A A 64 55.248 36.072 118.706 1.00 77.12 C
ATOM 22 N3 A A 64 55.444 36.039 120.017 1.00 78.35 N
ATOM 23 C4 A A 64 54.408 35.452 120.640 1.00 79.25 C
ATOM 24 P G A 65 55.701 37.111 127.133 1.00 79.28 P
ATOM 25 OP1 G A 65 55.546 37.102 128.609 1.00 80.09 O
ATOM 26 OP2 G A 65 54.981 38.135 126.330 1.00 80.68 O
ATOM 27 O5' G A 65 57.264 37.230 126.855 1.00 76.14 O
TER
ATOM 1 O3' U B 111 49.874 34.269 114.108 1.00 58.28 O
ATOM 2 P C B 112 50.354 32.784 114.472 1.00 59.91 P
ATOM 3 OP1 C B 112 50.337 31.978 113.229 1.00 59.20 O
ATOM 4 OP2 C B 112 49.591 32.323 115.657 1.00 58.98 O
ATOM 5 O5' C B 112 51.878 32.968 114.881 1.00 58.91 O
ATOM 6 C5' C B 112 52.828 33.379 113.903 1.00 60.05 C
ATOM 7 C4' C B 112 54.077 32.546 113.996 1.00 60.70 C
ATOM 8 O4' C B 112 54.872 32.990 115.127 1.00 62.13 O
ATOM 9 C3' C B 112 53.883 31.044 114.171 1.00 61.40 C
ATOM 10 O3' C B 112 54.851 30.369 113.387 1.00 64.37 O
ATOM 11 C2' C B 112 54.218 30.834 115.643 1.00 61.32 C
ATOM 12 O2' C B 112 54.724 29.544 115.914 1.00 62.23 O
ATOM 13 C1' C B 112 55.326 31.862 115.832 1.00 60.86 C
ATOM 14 N1 C B 112 55.648 32.253 117.217 1.00 60.23 N
ATOM 15 C2 C B 112 56.923 32.795 117.485 1.00 59.80 C
ATOM 16 O2 C B 112 57.727 32.953 116.549 1.00 57.45 O
ATOM 17 N3 C B 112 57.244 33.129 118.757 1.00 59.65 N
ATOM 18 C4 C B 112 56.359 32.942 119.740 1.00 59.46 C
ATOM 19 N4 C B 112 56.724 33.277 120.979 1.00 58.20 N
ATOM 20 C5 C B 112 55.059 32.403 119.496 1.00 59.22 C
ATOM 21 C6 C B 112 54.747 32.082 118.233 1.00 58.90 C
ATOM 22 P G B 113 54.390 29.603 112.056 1.00 66.53 P
ATOM 23 OP1 G B 113 53.709 28.336 112.447 1.00 66.06 O
ATOM 24 OP2 G B 113 55.561 29.559 111.130 1.00 66.83 O
ATOM 25 O5' G B 113 53.299 30.595 111.456 1.00 65.33 O
TER
ATOM 2 P A A 64 52.695 31.592 125.289 1.00 73.77 P
ATOM 3 OP1 A A 64 52.374 31.985 126.687 1.00 74.84 O
ATOM 4 OP2 A A 64 51.588 31.424 124.306 1.00 72.11 O
ATOM 5 O5' A A 64 53.730 32.667 124.729 1.00 75.47 O
ATOM 6 C5' A A 64 55.059 32.799 125.293 1.00 78.15 C
ATOM 7 C4' A A 64 55.670 34.120 124.881 1.00 79.75 C
ATOM 8 O4' A A 64 55.769 34.182 123.439 1.00 80.62 O
ATOM 9 C3' A A 64 54.865 35.332 125.316 1.00 79.67 C
ATOM 10 O3' A A 64 55.306 35.616 126.663 1.00 79.23 O
ATOM 11 C2' A A 64 55.084 36.351 124.189 1.00 80.06 C
ATOM 12 O2' A A 64 56.235 37.154 124.339 1.00 83.33 O
ATOM 13 C1' A A 64 55.328 35.441 122.978 1.00 80.11 C
ATOM 14 N9 A A 64 54.280 35.197 121.985 1.00 79.66 N
ATOM 15 C8 A A 64 53.046 34.614 122.138 1.00 79.33 C
ATOM 16 N7 A A 64 52.410 34.420 121.007 1.00 78.28 N
ATOM 17 C5 A A 64 53.270 34.941 120.048 1.00 79.00 C
ATOM 18 C6 A A 64 53.194 35.026 118.644 1.00 79.13 C
ATOM 19 N6 A A 64 52.177 34.550 117.923 1.00 80.79 N
ATOM 20 N1 A A 64 54.219 35.615 117.994 1.00 78.38 N
ATOM 21 C2 A A 64 55.248 36.072 118.706 1.00 77.12 C
ATOM 22 N3 A A 64 55.444 36.039 120.017 1.00 78.35 N
ATOM 23 C4 A A 64 54.408 35.452 120.640 1.00 79.25 C
ATOM 24 P G A 65 55.701 37.111 127.133 1.00 79.28 P
ATOM 25 OP1 G A 65 55.546 37.102 128.609 1.00 80.09 O
ATOM 26 OP2 G A 65 54.981 38.135 126.330 1.00 80.68 O
ATOM 27 O5' G A 65 57.264 37.230 126.855 1.00 76.14 O
TER
ATOM 1 O3' U B 111 49.874 34.269 114.108 1.00 58.28 O
ATOM 2 P C B 112 50.354 32.784 114.472 1.00 59.91 P
ATOM 3 OP1 C B 112 50.337 31.978 113.229 1.00 59.20 O
ATOM 4 OP2 C B 112 49.591 32.323 115.657 1.00 58.98 O
ATOM 5 O5' C B 112 51.878 32.968 114.881 1.00 58.91 O
ATOM 6 C5' C B 112 52.828 33.379 113.903 1.00 60.05 C
ATOM 7 C4' C B 112 54.077 32.546 113.996 1.00 60.70 C
ATOM 8 O4' C B 112 54.872 32.990 115.127 1.00 62.13 O
ATOM 9 C3' C B 112 53.883 31.044 114.171 1.00 61.40 C
ATOM 10 O3' C B 112 54.851 30.369 113.387 1.00 64.37 O
ATOM 11 C2' C B 112 54.218 30.834 115.643 1.00 61.32 C
ATOM 12 O2' C B 112 54.724 29.544 115.914 1.00 62.23 O
ATOM 13 C1' C B 112 55.326 31.862 115.832 1.00 60.86 C
ATOM 14 N1 C B 112 55.648 32.253 117.217 1.00 60.23 N
ATOM 15 C2 C B 112 56.923 32.795 117.485 1.00 59.80 C
ATOM 16 O2 C B 112 57.727 32.953 116.549 1.00 57.45 O
ATOM 17 N3 C B 112 57.244 33.129 118.757 1.00 59.65 N
ATOM 18 C4 C B 112 56.359 32.942 119.740 1.00 59.46 C
ATOM 19 N4 C B 112 56.724 33.277 120.979 1.00 58.20 N
ATOM 20 C5 C B 112 55.059 32.403 119.496 1.00 59.22 C
ATOM 21 C6 C B 112 54.747 32.082 118.233 1.00 58.90 C
ATOM 22 P G B 113 54.390 29.603 112.056 1.00 66.53 P
ATOM 23 OP1 G B 113 53.709 28.336 112.447 1.00 66.06 O
ATOM 24 OP2 G B 113 55.561 29.559 111.130 1.00 66.83 O
ATOM 25 O5' G B 113 53.299 30.595 111.456 1.00 65.33 O
TER
Atoms:
OP1: (52.374,31.985,126.687)
OP2: (51.588,31.424,124.306)
C3': (54.865,35.332,125.316)
C1': (55.328,35.441,122.978)
C5': (55.059,32.799,125.293)
O4': (55.769,34.182,123.439)
C8: (53.046,34.614,122.138)
O2': (56.235,37.154,124.339)
C6: (53.194,35.026,118.644)
C5: (53.270,34.941,120.048)
C4: (54.408,35.452,120.640)
P: (52.695,31.592,125.289)
C4': (55.670,34.120,124.881)
C2': (55.084,36.351,124.189)
C2: (55.248,36.072,118.706)
N1: (54.219,35.615,117.994)
N3: (55.444,36.039,120.017)
N6: (52.177,34.550,117.923)
N7: (52.410,34.420,121.007)
N9: (54.280,35.197,121.985)
O5': (53.730,32.667,124.729)
O3': (55.306,35.616,126.663)
OP2: (51.588,31.424,124.306)
C3': (54.865,35.332,125.316)
C1': (55.328,35.441,122.978)
C5': (55.059,32.799,125.293)
O4': (55.769,34.182,123.439)
C8: (53.046,34.614,122.138)
O2': (56.235,37.154,124.339)
C6: (53.194,35.026,118.644)
C5: (53.270,34.941,120.048)
C4: (54.408,35.452,120.640)
P: (52.695,31.592,125.289)
C4': (55.670,34.120,124.881)
C2': (55.084,36.351,124.189)
C2: (55.248,36.072,118.706)
N1: (54.219,35.615,117.994)
N3: (55.444,36.039,120.017)
N6: (52.177,34.550,117.923)
N7: (52.410,34.420,121.007)
N9: (54.280,35.197,121.985)
O5': (53.730,32.667,124.729)
O3': (55.306,35.616,126.663)
C2: (56.923,32.795,117.485)
OP1: (50.337,31.978,113.229)
OP2: (49.591,32.323,115.657)
C4: (56.359,32.942,119.740)
O5': (51.878,32.968,114.881)
C3': (53.883,31.044,114.171)
C1': (55.326,31.862,115.832)
O4': (54.872,32.990,115.127)
C5': (52.828,33.379,113.903)
P: (50.354,32.784,114.472)
O2: (57.727,32.953,116.549)
C4': (54.077,32.546,113.996)
C2': (54.218,30.834,115.643)
O2': (54.724,29.544,115.914)
N1: (55.648,32.253,117.217)
N3: (57.244,33.129,118.757)
N4: (56.724,33.277,120.979)
C6: (54.747,32.082,118.233)
C5: (55.059,32.403,119.496)
O3': (54.851,30.369,113.387)
OP1: (50.337,31.978,113.229)
OP2: (49.591,32.323,115.657)
C4: (56.359,32.942,119.740)
O5': (51.878,32.968,114.881)
C3': (53.883,31.044,114.171)
C1': (55.326,31.862,115.832)
O4': (54.872,32.990,115.127)
C5': (52.828,33.379,113.903)
P: (50.354,32.784,114.472)
O2: (57.727,32.953,116.549)
C4': (54.077,32.546,113.996)
C2': (54.218,30.834,115.643)
O2': (54.724,29.544,115.914)
N1: (55.648,32.253,117.217)
N3: (57.244,33.129,118.757)
N4: (56.724,33.277,120.979)
C6: (54.747,32.082,118.233)
C5: (55.059,32.403,119.496)
O3': (54.851,30.369,113.387)
Image (generated by PyMOL):