Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0682:0719
Extra
PDB:
ATOM 1 O3' A A 681 66.818 73.010 40.071 1.00 53.94 O
ATOM 2 P A A 682 65.802 72.403 38.986 1.00 55.36 P
ATOM 3 OP1 A A 682 65.856 73.299 37.807 1.00 54.86 O
ATOM 4 OP2 A A 682 64.501 72.145 39.636 1.00 55.23 O
ATOM 5 O5' A A 682 66.460 71.002 38.597 1.00 56.44 O
ATOM 6 C5' A A 682 67.724 70.949 37.898 1.00 56.70 C
ATOM 7 C4' A A 682 68.189 69.519 37.739 1.00 58.27 C
ATOM 8 O4' A A 682 68.487 68.951 39.044 1.00 58.23 O
ATOM 9 C3' A A 682 67.199 68.550 37.110 1.00 59.07 C
ATOM 10 O3' A A 682 67.230 68.592 35.687 1.00 61.51 O
ATOM 11 C2' A A 682 67.694 67.215 37.646 1.00 58.99 C
ATOM 12 O2' A A 682 68.840 66.748 36.962 1.00 57.91 O
ATOM 13 C1' A A 682 68.067 67.596 39.080 1.00 58.34 C
ATOM 14 N9 A A 682 66.903 67.514 39.964 1.00 58.25 N
ATOM 15 C8 A A 682 65.878 68.424 40.079 1.00 57.50 C
ATOM 16 N7 A A 682 64.956 68.076 40.938 1.00 57.36 N
ATOM 17 C5 A A 682 65.402 66.858 41.429 1.00 56.78 C
ATOM 18 C6 A A 682 64.863 65.974 42.372 1.00 56.77 C
ATOM 19 N6 A A 682 63.708 66.187 43.008 1.00 56.12 N
ATOM 20 N1 A A 682 65.556 64.847 42.641 1.00 56.50 N
ATOM 21 C2 A A 682 66.712 64.636 41.994 1.00 56.42 C
ATOM 22 N3 A A 682 67.320 65.391 41.083 1.00 55.69 N
ATOM 23 C4 A A 682 66.604 66.502 40.842 1.00 57.21 C
ATOM 24 P C A 683 65.854 68.553 34.844 1.00 63.30 P
ATOM 25 OP1 C A 683 66.267 68.128 33.479 1.00 63.98 O
ATOM 26 OP2 C A 683 65.119 69.828 35.017 1.00 63.93 O
ATOM 27 O5' C A 683 64.961 67.419 35.532 1.00 63.02 O
TER
ATOM 1 O3' U B 718 59.385 63.906 44.211 1.00 52.49 O
ATOM 2 P C B 719 60.768 63.192 44.605 1.00 54.48 P
ATOM 3 OP1 C B 719 61.794 63.647 43.640 1.00 55.26 O
ATOM 4 OP2 C B 719 60.506 61.751 44.768 1.00 55.59 O
ATOM 5 O5' C B 719 61.133 63.785 46.037 1.00 55.96 O
ATOM 6 C5' C B 719 61.575 65.153 46.197 1.00 55.18 C
ATOM 7 C4' C B 719 61.996 65.400 47.628 1.00 54.55 C
ATOM 8 O4' C B 719 60.847 65.362 48.513 1.00 53.71 O
ATOM 9 C3' C B 719 62.938 64.357 48.193 1.00 54.30 C
ATOM 10 O3' C B 719 64.258 64.644 47.790 1.00 55.79 O
ATOM 11 C2' C B 719 62.726 64.488 49.696 1.00 53.99 C
ATOM 12 O2' C B 719 63.431 65.562 50.276 1.00 53.98 O
ATOM 13 C1' C B 719 61.230 64.803 49.762 1.00 55.10 C
ATOM 14 N1 C B 719 60.370 63.637 50.056 1.00 55.05 N
ATOM 15 C2 C B 719 60.018 63.377 51.383 1.00 54.48 C
ATOM 16 O2 C B 719 60.429 64.124 52.274 1.00 54.24 O
ATOM 17 N3 C B 719 59.235 62.322 51.662 1.00 55.52 N
ATOM 18 C4 C B 719 58.796 61.541 50.680 1.00 56.29 C
ATOM 19 N4 C B 719 58.017 60.507 51.007 1.00 57.78 N
ATOM 20 C5 C B 719 59.135 61.781 49.319 1.00 56.10 C
ATOM 21 C6 C B 719 59.918 62.826 49.055 1.00 55.22 C
ATOM 22 P U B 720 65.322 63.459 47.662 1.00 59.59 P
ATOM 23 OP1 U B 720 66.593 64.066 47.186 1.00 60.79 O
ATOM 24 OP2 U B 720 64.717 62.331 46.912 1.00 59.79 O
ATOM 25 O5' U B 720 65.554 63.007 49.165 1.00 60.59 O
TER
ATOM 2 P A A 682 65.802 72.403 38.986 1.00 55.36 P
ATOM 3 OP1 A A 682 65.856 73.299 37.807 1.00 54.86 O
ATOM 4 OP2 A A 682 64.501 72.145 39.636 1.00 55.23 O
ATOM 5 O5' A A 682 66.460 71.002 38.597 1.00 56.44 O
ATOM 6 C5' A A 682 67.724 70.949 37.898 1.00 56.70 C
ATOM 7 C4' A A 682 68.189 69.519 37.739 1.00 58.27 C
ATOM 8 O4' A A 682 68.487 68.951 39.044 1.00 58.23 O
ATOM 9 C3' A A 682 67.199 68.550 37.110 1.00 59.07 C
ATOM 10 O3' A A 682 67.230 68.592 35.687 1.00 61.51 O
ATOM 11 C2' A A 682 67.694 67.215 37.646 1.00 58.99 C
ATOM 12 O2' A A 682 68.840 66.748 36.962 1.00 57.91 O
ATOM 13 C1' A A 682 68.067 67.596 39.080 1.00 58.34 C
ATOM 14 N9 A A 682 66.903 67.514 39.964 1.00 58.25 N
ATOM 15 C8 A A 682 65.878 68.424 40.079 1.00 57.50 C
ATOM 16 N7 A A 682 64.956 68.076 40.938 1.00 57.36 N
ATOM 17 C5 A A 682 65.402 66.858 41.429 1.00 56.78 C
ATOM 18 C6 A A 682 64.863 65.974 42.372 1.00 56.77 C
ATOM 19 N6 A A 682 63.708 66.187 43.008 1.00 56.12 N
ATOM 20 N1 A A 682 65.556 64.847 42.641 1.00 56.50 N
ATOM 21 C2 A A 682 66.712 64.636 41.994 1.00 56.42 C
ATOM 22 N3 A A 682 67.320 65.391 41.083 1.00 55.69 N
ATOM 23 C4 A A 682 66.604 66.502 40.842 1.00 57.21 C
ATOM 24 P C A 683 65.854 68.553 34.844 1.00 63.30 P
ATOM 25 OP1 C A 683 66.267 68.128 33.479 1.00 63.98 O
ATOM 26 OP2 C A 683 65.119 69.828 35.017 1.00 63.93 O
ATOM 27 O5' C A 683 64.961 67.419 35.532 1.00 63.02 O
TER
ATOM 1 O3' U B 718 59.385 63.906 44.211 1.00 52.49 O
ATOM 2 P C B 719 60.768 63.192 44.605 1.00 54.48 P
ATOM 3 OP1 C B 719 61.794 63.647 43.640 1.00 55.26 O
ATOM 4 OP2 C B 719 60.506 61.751 44.768 1.00 55.59 O
ATOM 5 O5' C B 719 61.133 63.785 46.037 1.00 55.96 O
ATOM 6 C5' C B 719 61.575 65.153 46.197 1.00 55.18 C
ATOM 7 C4' C B 719 61.996 65.400 47.628 1.00 54.55 C
ATOM 8 O4' C B 719 60.847 65.362 48.513 1.00 53.71 O
ATOM 9 C3' C B 719 62.938 64.357 48.193 1.00 54.30 C
ATOM 10 O3' C B 719 64.258 64.644 47.790 1.00 55.79 O
ATOM 11 C2' C B 719 62.726 64.488 49.696 1.00 53.99 C
ATOM 12 O2' C B 719 63.431 65.562 50.276 1.00 53.98 O
ATOM 13 C1' C B 719 61.230 64.803 49.762 1.00 55.10 C
ATOM 14 N1 C B 719 60.370 63.637 50.056 1.00 55.05 N
ATOM 15 C2 C B 719 60.018 63.377 51.383 1.00 54.48 C
ATOM 16 O2 C B 719 60.429 64.124 52.274 1.00 54.24 O
ATOM 17 N3 C B 719 59.235 62.322 51.662 1.00 55.52 N
ATOM 18 C4 C B 719 58.796 61.541 50.680 1.00 56.29 C
ATOM 19 N4 C B 719 58.017 60.507 51.007 1.00 57.78 N
ATOM 20 C5 C B 719 59.135 61.781 49.319 1.00 56.10 C
ATOM 21 C6 C B 719 59.918 62.826 49.055 1.00 55.22 C
ATOM 22 P U B 720 65.322 63.459 47.662 1.00 59.59 P
ATOM 23 OP1 U B 720 66.593 64.066 47.186 1.00 60.79 O
ATOM 24 OP2 U B 720 64.717 62.331 46.912 1.00 59.79 O
ATOM 25 O5' U B 720 65.554 63.007 49.165 1.00 60.59 O
TER
Atoms:
OP1: (65.856,73.299,37.807)
OP2: (64.501,72.145,39.636)
C3': (67.199,68.550,37.110)
C1': (68.067,67.596,39.080)
C5': (67.724,70.949,37.898)
O4': (68.487,68.951,39.044)
C8: (65.878,68.424,40.079)
O2': (68.840,66.748,36.962)
C6: (64.863,65.974,42.372)
C5: (65.402,66.858,41.429)
C4: (66.604,66.502,40.842)
P: (65.802,72.403,38.986)
C4': (68.189,69.519,37.739)
C2': (67.694,67.215,37.646)
C2: (66.712,64.636,41.994)
N1: (65.556,64.847,42.641)
N3: (67.320,65.391,41.083)
N6: (63.708,66.187,43.008)
N7: (64.956,68.076,40.938)
N9: (66.903,67.514,39.964)
O5': (66.460,71.002,38.597)
O3': (67.230,68.592,35.687)
OP2: (64.501,72.145,39.636)
C3': (67.199,68.550,37.110)
C1': (68.067,67.596,39.080)
C5': (67.724,70.949,37.898)
O4': (68.487,68.951,39.044)
C8: (65.878,68.424,40.079)
O2': (68.840,66.748,36.962)
C6: (64.863,65.974,42.372)
C5: (65.402,66.858,41.429)
C4: (66.604,66.502,40.842)
P: (65.802,72.403,38.986)
C4': (68.189,69.519,37.739)
C2': (67.694,67.215,37.646)
C2: (66.712,64.636,41.994)
N1: (65.556,64.847,42.641)
N3: (67.320,65.391,41.083)
N6: (63.708,66.187,43.008)
N7: (64.956,68.076,40.938)
N9: (66.903,67.514,39.964)
O5': (66.460,71.002,38.597)
O3': (67.230,68.592,35.687)
C2: (60.018,63.377,51.383)
OP1: (61.794,63.647,43.640)
OP2: (60.506,61.751,44.768)
C4: (58.796,61.541,50.680)
O5': (61.133,63.785,46.037)
C3': (62.938,64.357,48.193)
C1': (61.230,64.803,49.762)
O4': (60.847,65.362,48.513)
C5': (61.575,65.153,46.197)
P: (60.768,63.192,44.605)
O2: (60.429,64.124,52.274)
C4': (61.996,65.400,47.628)
C2': (62.726,64.488,49.696)
O2': (63.431,65.562,50.276)
N1: (60.370,63.637,50.056)
N3: (59.235,62.322,51.662)
N4: (58.017,60.507,51.007)
C6: (59.918,62.826,49.055)
C5: (59.135,61.781,49.319)
O3': (64.258,64.644,47.790)
OP1: (61.794,63.647,43.640)
OP2: (60.506,61.751,44.768)
C4: (58.796,61.541,50.680)
O5': (61.133,63.785,46.037)
C3': (62.938,64.357,48.193)
C1': (61.230,64.803,49.762)
O4': (60.847,65.362,48.513)
C5': (61.575,65.153,46.197)
P: (60.768,63.192,44.605)
O2: (60.429,64.124,52.274)
C4': (61.996,65.400,47.628)
C2': (62.726,64.488,49.696)
O2': (63.431,65.562,50.276)
N1: (60.370,63.637,50.056)
N3: (59.235,62.322,51.662)
N4: (58.017,60.507,51.007)
C6: (59.918,62.826,49.055)
C5: (59.135,61.781,49.319)
O3': (64.258,64.644,47.790)
Image (generated by PyMOL):