Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1901:A1898
Extra
PDB:
ATOM 1 O3' A A1900 110.471 115.973 82.368 1.00 51.43 O
ATOM 2 P C A1901 109.557 115.759 83.680 1.00 51.12 P
ATOM 3 OP1 C A1901 108.553 116.862 83.750 1.00 49.86 O
ATOM 4 OP2 C A1901 110.440 115.512 84.836 1.00 51.14 O
ATOM 5 O5' C A1901 108.713 114.442 83.363 1.00 51.27 O
ATOM 6 C5' C A1901 107.584 114.521 82.466 1.00 53.70 C
ATOM 7 C4' C A1901 106.766 113.263 82.492 1.00 54.64 C
ATOM 8 O4' C A1901 107.529 112.154 81.971 1.00 55.77 O
ATOM 9 C3' C A1901 106.329 112.813 83.865 1.00 55.03 C
ATOM 10 O3' C A1901 105.176 113.519 84.256 1.00 54.74 O
ATOM 11 C2' C A1901 106.036 111.342 83.645 1.00 56.34 C
ATOM 12 O2' C A1901 104.773 111.154 83.045 1.00 57.60 O
ATOM 13 C1' C A1901 107.131 110.966 82.638 1.00 57.33 C
ATOM 14 N1 C A1901 108.320 110.340 83.245 1.00 58.76 N
ATOM 15 C2 C A1901 108.275 108.977 83.548 1.00 60.55 C
ATOM 16 O2 C A1901 107.234 108.339 83.300 1.00 61.93 O
ATOM 17 N3 C A1901 109.364 108.390 84.097 1.00 60.03 N
ATOM 18 C4 C A1901 110.461 109.109 84.334 1.00 57.62 C
ATOM 19 N4 C A1901 111.514 108.484 84.859 1.00 56.46 N
ATOM 20 C5 C A1901 110.529 110.497 84.039 1.00 57.22 C
ATOM 21 C6 C A1901 109.448 111.067 83.501 1.00 57.43 C
ATOM 22 P G A1902 105.009 113.960 85.783 1.00 56.29 P
ATOM 23 OP1 G A1902 103.678 114.586 85.924 1.00 55.92 O
ATOM 24 OP2 G A1902 106.228 114.701 86.215 1.00 57.33 O
ATOM 25 O5' G A1902 104.960 112.564 86.526 1.00 54.30 O
TER
ATOM 1 O3' U B1897 120.532 112.342 81.302 1.00 50.70 O
ATOM 2 P C B1898 120.264 112.353 82.885 1.00 48.92 P
ATOM 3 OP1 C B1898 120.719 113.622 83.529 1.00 50.57 O
ATOM 4 OP2 C B1898 120.750 111.064 83.403 1.00 47.59 O
ATOM 5 O5' C B1898 118.683 112.359 82.987 1.00 50.21 O
ATOM 6 C5' C B1898 117.917 113.477 82.514 1.00 50.00 C
ATOM 7 C4' C B1898 116.763 113.732 83.442 1.00 51.30 C
ATOM 8 O4' C B1898 115.949 112.536 83.506 1.00 52.56 O
ATOM 9 C3' C B1898 117.124 114.063 84.880 1.00 51.75 C
ATOM 10 O3' C B1898 117.269 115.489 84.960 1.00 52.60 O
ATOM 11 C2' C B1898 115.885 113.589 85.641 1.00 51.98 C
ATOM 12 O2' C B1898 114.871 114.562 85.591 1.00 50.81 O
ATOM 13 C1' C B1898 115.427 112.378 84.811 1.00 53.23 C
ATOM 14 N1 C B1898 115.846 111.054 85.312 1.00 55.82 N
ATOM 15 C2 C B1898 114.881 110.035 85.489 1.00 57.27 C
ATOM 16 O2 C B1898 113.697 110.244 85.188 1.00 57.30 O
ATOM 17 N3 C B1898 115.278 108.839 85.978 1.00 59.23 N
ATOM 18 C4 C B1898 116.564 108.622 86.260 1.00 59.82 C
ATOM 19 N4 C B1898 116.912 107.424 86.734 1.00 61.85 N
ATOM 20 C5 C B1898 117.555 109.619 86.071 1.00 58.51 C
ATOM 21 C6 C B1898 117.159 110.809 85.605 1.00 57.47 C
ATOM 22 P A B1899 118.076 116.182 86.177 1.00 52.01 P
ATOM 23 OP1 A B1899 119.445 116.409 85.672 1.00 52.88 O
ATOM 24 OP2 A B1899 117.867 115.429 87.451 1.00 51.58 O
ATOM 25 O5' A B1899 117.416 117.629 86.311 1.00 51.16 O
TER
ATOM 2 P C A1901 109.557 115.759 83.680 1.00 51.12 P
ATOM 3 OP1 C A1901 108.553 116.862 83.750 1.00 49.86 O
ATOM 4 OP2 C A1901 110.440 115.512 84.836 1.00 51.14 O
ATOM 5 O5' C A1901 108.713 114.442 83.363 1.00 51.27 O
ATOM 6 C5' C A1901 107.584 114.521 82.466 1.00 53.70 C
ATOM 7 C4' C A1901 106.766 113.263 82.492 1.00 54.64 C
ATOM 8 O4' C A1901 107.529 112.154 81.971 1.00 55.77 O
ATOM 9 C3' C A1901 106.329 112.813 83.865 1.00 55.03 C
ATOM 10 O3' C A1901 105.176 113.519 84.256 1.00 54.74 O
ATOM 11 C2' C A1901 106.036 111.342 83.645 1.00 56.34 C
ATOM 12 O2' C A1901 104.773 111.154 83.045 1.00 57.60 O
ATOM 13 C1' C A1901 107.131 110.966 82.638 1.00 57.33 C
ATOM 14 N1 C A1901 108.320 110.340 83.245 1.00 58.76 N
ATOM 15 C2 C A1901 108.275 108.977 83.548 1.00 60.55 C
ATOM 16 O2 C A1901 107.234 108.339 83.300 1.00 61.93 O
ATOM 17 N3 C A1901 109.364 108.390 84.097 1.00 60.03 N
ATOM 18 C4 C A1901 110.461 109.109 84.334 1.00 57.62 C
ATOM 19 N4 C A1901 111.514 108.484 84.859 1.00 56.46 N
ATOM 20 C5 C A1901 110.529 110.497 84.039 1.00 57.22 C
ATOM 21 C6 C A1901 109.448 111.067 83.501 1.00 57.43 C
ATOM 22 P G A1902 105.009 113.960 85.783 1.00 56.29 P
ATOM 23 OP1 G A1902 103.678 114.586 85.924 1.00 55.92 O
ATOM 24 OP2 G A1902 106.228 114.701 86.215 1.00 57.33 O
ATOM 25 O5' G A1902 104.960 112.564 86.526 1.00 54.30 O
TER
ATOM 1 O3' U B1897 120.532 112.342 81.302 1.00 50.70 O
ATOM 2 P C B1898 120.264 112.353 82.885 1.00 48.92 P
ATOM 3 OP1 C B1898 120.719 113.622 83.529 1.00 50.57 O
ATOM 4 OP2 C B1898 120.750 111.064 83.403 1.00 47.59 O
ATOM 5 O5' C B1898 118.683 112.359 82.987 1.00 50.21 O
ATOM 6 C5' C B1898 117.917 113.477 82.514 1.00 50.00 C
ATOM 7 C4' C B1898 116.763 113.732 83.442 1.00 51.30 C
ATOM 8 O4' C B1898 115.949 112.536 83.506 1.00 52.56 O
ATOM 9 C3' C B1898 117.124 114.063 84.880 1.00 51.75 C
ATOM 10 O3' C B1898 117.269 115.489 84.960 1.00 52.60 O
ATOM 11 C2' C B1898 115.885 113.589 85.641 1.00 51.98 C
ATOM 12 O2' C B1898 114.871 114.562 85.591 1.00 50.81 O
ATOM 13 C1' C B1898 115.427 112.378 84.811 1.00 53.23 C
ATOM 14 N1 C B1898 115.846 111.054 85.312 1.00 55.82 N
ATOM 15 C2 C B1898 114.881 110.035 85.489 1.00 57.27 C
ATOM 16 O2 C B1898 113.697 110.244 85.188 1.00 57.30 O
ATOM 17 N3 C B1898 115.278 108.839 85.978 1.00 59.23 N
ATOM 18 C4 C B1898 116.564 108.622 86.260 1.00 59.82 C
ATOM 19 N4 C B1898 116.912 107.424 86.734 1.00 61.85 N
ATOM 20 C5 C B1898 117.555 109.619 86.071 1.00 58.51 C
ATOM 21 C6 C B1898 117.159 110.809 85.605 1.00 57.47 C
ATOM 22 P A B1899 118.076 116.182 86.177 1.00 52.01 P
ATOM 23 OP1 A B1899 119.445 116.409 85.672 1.00 52.88 O
ATOM 24 OP2 A B1899 117.867 115.429 87.451 1.00 51.58 O
ATOM 25 O5' A B1899 117.416 117.629 86.311 1.00 51.16 O
TER
Atoms:
C2: (108.275,108.977,83.548)
OP1: (108.553,116.862,83.750)
OP2: (110.440,115.512,84.836)
C4: (110.461,109.109,84.334)
O5': (108.713,114.442,83.363)
C3': (106.329,112.813,83.865)
C1': (107.131,110.966,82.638)
O4': (107.529,112.154,81.971)
C5': (107.584,114.521,82.466)
P: (109.557,115.759,83.680)
O2: (107.234,108.339,83.300)
C4': (106.766,113.263,82.492)
C2': (106.036,111.342,83.645)
O2': (104.773,111.154,83.045)
N1: (108.320,110.340,83.245)
N3: (109.364,108.390,84.097)
N4: (111.514,108.484,84.859)
C6: (109.448,111.067,83.501)
C5: (110.529,110.497,84.039)
O3': (105.176,113.519,84.256)
OP1: (108.553,116.862,83.750)
OP2: (110.440,115.512,84.836)
C4: (110.461,109.109,84.334)
O5': (108.713,114.442,83.363)
C3': (106.329,112.813,83.865)
C1': (107.131,110.966,82.638)
O4': (107.529,112.154,81.971)
C5': (107.584,114.521,82.466)
P: (109.557,115.759,83.680)
O2: (107.234,108.339,83.300)
C4': (106.766,113.263,82.492)
C2': (106.036,111.342,83.645)
O2': (104.773,111.154,83.045)
N1: (108.320,110.340,83.245)
N3: (109.364,108.390,84.097)
N4: (111.514,108.484,84.859)
C6: (109.448,111.067,83.501)
C5: (110.529,110.497,84.039)
O3': (105.176,113.519,84.256)
C2: (114.881,110.035,85.489)
OP1: (120.719,113.622,83.529)
OP2: (120.750,111.064,83.403)
C4: (116.564,108.622,86.260)
O5': (118.683,112.359,82.987)
C3': (117.124,114.063,84.880)
C1': (115.427,112.378,84.811)
O4': (115.949,112.536,83.506)
C5': (117.917,113.477,82.514)
P: (120.264,112.353,82.885)
O2: (113.697,110.244,85.188)
C4': (116.763,113.732,83.442)
C2': (115.885,113.589,85.641)
O2': (114.871,114.562,85.591)
N1: (115.846,111.054,85.312)
N3: (115.278,108.839,85.978)
N4: (116.912,107.424,86.734)
C6: (117.159,110.809,85.605)
C5: (117.555,109.619,86.071)
O3': (117.269,115.489,84.960)
OP1: (120.719,113.622,83.529)
OP2: (120.750,111.064,83.403)
C4: (116.564,108.622,86.260)
O5': (118.683,112.359,82.987)
C3': (117.124,114.063,84.880)
C1': (115.427,112.378,84.811)
O4': (115.949,112.536,83.506)
C5': (117.917,113.477,82.514)
P: (120.264,112.353,82.885)
O2: (113.697,110.244,85.188)
C4': (116.763,113.732,83.442)
C2': (115.885,113.589,85.641)
O2': (114.871,114.562,85.591)
N1: (115.846,111.054,85.312)
N3: (115.278,108.839,85.978)
N4: (116.912,107.424,86.734)
C6: (117.159,110.809,85.605)
C5: (117.555,109.619,86.071)
O3': (117.269,115.489,84.960)
Image (generated by PyMOL):