ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:01082:01197

Extra

PDB:
ATOM 1 O3' U A1081 31.600 103.331 124.406 1.00 41.31 O
ATOM 2 P A A1082 32.200 104.026 123.086 1.00 41.39 P
ATOM 3 OP1 A A1082 32.064 105.503 123.207 1.00 39.80 O
ATOM 4 OP2 A A1082 31.616 103.317 121.916 1.00 39.77 O
ATOM 5 O5' A A1082 33.751 103.690 123.153 1.00 42.83 O
ATOM 6 C5' A A1082 34.210 102.336 123.153 1.00 41.87 C
ATOM 7 C4' A A1082 35.212 102.141 122.047 1.00 44.16 C
ATOM 8 O4' A A1082 36.262 103.143 122.146 1.00 43.65 O
ATOM 9 C3' A A1082 35.917 100.793 122.038 1.00 44.79 C
ATOM 10 O3' A A1082 36.221 100.478 120.687 1.00 47.70 O
ATOM 11 C2' A A1082 37.202 101.100 122.793 1.00 43.07 C
ATOM 12 O2' A A1082 38.239 100.208 122.474 1.00 44.75 O
ATOM 13 C1' A A1082 37.515 102.501 122.271 1.00 42.95 C
ATOM 14 N9 A A1082 38.369 103.329 123.125 1.00 42.87 N
ATOM 15 C8 A A1082 38.758 103.114 124.424 1.00 42.17 C
ATOM 16 N7 A A1082 39.511 104.069 124.914 1.00 42.87 N
ATOM 17 C5 A A1082 39.631 104.970 123.867 1.00 41.03 C
ATOM 18 C6 A A1082 40.302 106.200 123.749 1.00 40.62 C
ATOM 19 N6 A A1082 40.999 106.761 124.740 1.00 40.39 N
ATOM 20 N1 A A1082 40.228 106.844 122.566 1.00 38.05 N
ATOM 21 C2 A A1082 39.521 106.286 121.580 1.00 37.85 C
ATOM 22 N3 A A1082 38.846 105.144 121.569 1.00 38.76 N
ATOM 23 C4 A A1082 38.941 104.525 122.757 1.00 41.24 C
ATOM 24 P A A1083 35.126 99.742 119.772 1.00 49.46 P
ATOM 25 OP1 A A1083 35.576 99.941 118.372 1.00 48.50 O
ATOM 26 OP2 A A1083 33.756 100.165 120.173 1.00 51.29 O
ATOM 27 O5' A A1083 35.264 98.209 120.170 1.00 47.10 O
TER

ATOM 1 O3' U B1196 39.500 111.650 126.400 1.00 43.23 O
ATOM 2 P C B1197 39.567 110.142 125.873 1.00 43.37 P
ATOM 3 OP1 C B1197 39.191 109.281 127.018 1.00 44.19 O
ATOM 4 OP2 C B1197 40.862 109.918 125.185 1.00 43.92 O
ATOM 5 O5' C B1197 38.394 110.101 124.794 1.00 42.33 O
ATOM 6 C5' C B1197 38.303 109.028 123.852 1.00 38.55 C
ATOM 7 C4' C B1197 36.977 108.314 123.982 1.00 37.31 C
ATOM 8 O4' C B1197 36.256 108.762 125.162 1.00 36.36 O
ATOM 9 C3' C B1197 35.969 108.585 122.884 1.00 37.21 C
ATOM 10 O3' C B1197 36.288 107.847 121.709 1.00 38.71 O
ATOM 11 C2' C B1197 34.684 108.060 123.523 1.00 36.06 C
ATOM 12 O2' C B1197 34.565 106.649 123.484 1.00 35.53 O
ATOM 13 C1' C B1197 34.872 108.486 124.984 1.00 34.75 C
ATOM 14 N1 C B1197 34.068 109.678 125.331 1.00 32.90 N
ATOM 15 C2 C B1197 32.684 109.532 125.433 1.00 29.71 C
ATOM 16 O2 C B1197 32.190 108.414 125.275 1.00 31.42 O
ATOM 17 N3 C B1197 31.920 110.607 125.699 1.00 30.51 N
ATOM 18 C4 C B1197 32.487 111.799 125.872 1.00 31.71 C
ATOM 19 N4 C B1197 31.682 112.842 126.113 1.00 32.45 N
ATOM 20 C5 C B1197 33.900 111.979 125.802 1.00 29.60 C
ATOM 21 C6 C B1197 34.646 110.902 125.533 1.00 30.61 C
ATOM 22 P G B1198 36.889 108.598 120.417 1.00 38.36 P
ATOM 23 OP1 G B1198 36.745 107.628 119.292 1.00 37.71 O
ATOM 24 OP2 G B1198 38.227 109.146 120.754 1.00 36.89 O
ATOM 25 O5' G B1198 35.936 109.848 120.161 1.00 34.87 O
TER

Atoms:
OP1: (32.064,105.503,123.207)
OP2: (31.616,103.317,121.916)
C3': (35.917,100.793,122.038)
C1': (37.515,102.501,122.271)
C5': (34.210,102.336,123.153)
O4': (36.262,103.143,122.146)
C8: (38.758,103.114,124.424)
O2': (38.239,100.208,122.474)
C6: (40.302,106.200,123.749)
C5: (39.631,104.970,123.867)
C4: (38.941,104.525,122.757)
P: (32.200,104.026,123.086)
C4': (35.212,102.141,122.047)
C2': (37.202,101.100,122.793)
C2: (39.521,106.286,121.580)
N1: (40.228,106.844,122.566)
N3: (38.846,105.144,121.569)
N6: (40.999,106.761,124.740)
N7: (39.511,104.069,124.914)
N9: (38.369,103.329,123.125)
O5': (33.751,103.690,123.153)
O3': (36.221,100.478,120.687)
C2: (32.684,109.532,125.433)
OP1: (39.191,109.281,127.018)
OP2: (40.862,109.918,125.185)
C4: (32.487,111.799,125.872)
O5': (38.394,110.101,124.794)
C3': (35.969,108.585,122.884)
C1': (34.872,108.486,124.984)
O4': (36.256,108.762,125.162)
C5': (38.303,109.028,123.852)
P: (39.567,110.142,125.873)
O2: (32.190,108.414,125.275)
C4': (36.977,108.314,123.982)
C2': (34.684,108.060,123.523)
O2': (34.565,106.649,123.484)
N1: (34.068,109.678,125.331)
N3: (31.920,110.607,125.699)
N4: (31.682,112.842,126.113)
C6: (34.646,110.902,125.533)
C5: (33.900,111.979,125.802)
O3': (36.288,107.847,121.709)
Image (generated by PyMOL):
PyMOL image
show in jmol