Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQO:0575:0558
Extra
PDB:
ATOM 1 O3' C A 574 -13.244 88.600 114.465 1.00 63.56 O
ATOM 2 P A A 575 -12.894 89.186 113.008 1.00 63.98 P
ATOM 3 OP1 A A 575 -12.367 90.563 113.188 1.00 65.44 O
ATOM 4 OP2 A A 575 -14.081 88.966 112.143 1.00 65.18 O
ATOM 5 O5' A A 575 -11.730 88.240 112.475 1.00 62.59 O
ATOM 6 C5' A A 575 -11.457 88.131 111.062 1.00 62.98 C
ATOM 7 C4' A A 575 -9.995 87.813 110.825 1.00 61.49 C
ATOM 8 O4' A A 575 -9.184 88.929 111.285 1.00 60.83 O
ATOM 9 C3' A A 575 -9.445 86.576 111.527 1.00 61.43 C
ATOM 10 O3' A A 575 -8.471 85.976 110.686 1.00 62.63 O
ATOM 11 C2' A A 575 -8.793 87.166 112.777 1.00 61.45 C
ATOM 12 O2' A A 575 -7.747 86.376 113.306 1.00 62.81 O
ATOM 13 C1' A A 575 -8.239 88.478 112.233 1.00 60.29 C
ATOM 14 N9 A A 575 -8.061 89.526 113.237 1.00 59.76 N
ATOM 15 C8 A A 575 -9.032 90.224 113.907 1.00 59.51 C
ATOM 16 N7 A A 575 -8.561 91.121 114.739 1.00 59.75 N
ATOM 17 C5 A A 575 -7.185 91.004 114.613 1.00 59.25 C
ATOM 18 C6 A A 575 -6.114 91.684 115.230 1.00 59.19 C
ATOM 19 N6 A A 575 -6.272 92.648 116.144 1.00 59.86 N
ATOM 20 N1 A A 575 -4.861 91.334 114.875 1.00 57.54 N
ATOM 21 C2 A A 575 -4.701 90.362 113.968 1.00 58.80 C
ATOM 22 N3 A A 575 -5.624 89.647 113.322 1.00 59.17 N
ATOM 23 C4 A A 575 -6.861 90.023 113.693 1.00 59.66 C
ATOM 24 P G A 576 -8.859 84.686 109.813 1.00 64.10 P
ATOM 25 OP1 G A 576 -10.276 84.372 110.097 1.00 69.09 O
ATOM 26 OP2 G A 576 -7.832 83.638 110.007 1.00 67.00 O
ATOM 27 O5' G A 576 -8.789 85.201 108.305 1.00 65.07 O
TER
ATOM 1 O3' A B 557 -2.317 95.121 117.613 1.00 57.02 O
ATOM 2 P C B 558 -3.206 94.663 118.867 1.00 58.97 P
ATOM 3 OP1 C B 558 -2.270 94.193 119.920 1.00 59.50 O
ATOM 4 OP2 C B 558 -4.282 93.751 118.383 1.00 57.86 O
ATOM 5 O5' C B 558 -3.864 96.030 119.347 1.00 58.30 O
ATOM 6 C5' C B 558 -3.051 97.196 119.544 1.00 59.53 C
ATOM 7 C4' C B 558 -3.920 98.416 119.698 1.00 62.35 C
ATOM 8 O4' C B 558 -4.716 98.594 118.497 1.00 61.79 O
ATOM 9 C3' C B 558 -4.949 98.341 120.811 1.00 62.99 C
ATOM 10 O3' C B 558 -4.385 98.658 122.077 1.00 65.88 O
ATOM 11 C2' C B 558 -5.979 99.360 120.355 1.00 63.17 C
ATOM 12 O2' C B 558 -5.549 100.684 120.595 1.00 64.60 O
ATOM 13 C1' C B 558 -5.998 99.100 118.847 1.00 62.73 C
ATOM 14 N1 C B 558 -7.019 98.114 118.431 1.00 61.54 N
ATOM 15 C2 C B 558 -8.343 98.538 118.251 1.00 62.02 C
ATOM 16 O2 C B 558 -8.634 99.730 118.463 1.00 64.96 O
ATOM 17 N3 C B 558 -9.274 97.641 117.851 1.00 60.55 N
ATOM 18 C4 C B 558 -8.928 96.371 117.635 1.00 60.45 C
ATOM 19 N4 C B 558 -9.877 95.521 117.234 1.00 60.28 N
ATOM 20 C5 C B 558 -7.595 95.913 117.819 1.00 60.75 C
ATOM 21 C6 C B 558 -6.682 96.807 118.215 1.00 61.03 C
ATOM 22 P C B 559 -4.670 97.695 123.335 1.00 66.93 P
ATOM 23 OP1 C B 559 -4.018 98.291 124.529 1.00 66.66 O
ATOM 24 OP2 C B 559 -4.358 96.292 122.948 1.00 66.31 O
ATOM 25 O5' C B 559 -6.243 97.793 123.532 1.00 68.29 O
TER
ATOM 2 P A A 575 -12.894 89.186 113.008 1.00 63.98 P
ATOM 3 OP1 A A 575 -12.367 90.563 113.188 1.00 65.44 O
ATOM 4 OP2 A A 575 -14.081 88.966 112.143 1.00 65.18 O
ATOM 5 O5' A A 575 -11.730 88.240 112.475 1.00 62.59 O
ATOM 6 C5' A A 575 -11.457 88.131 111.062 1.00 62.98 C
ATOM 7 C4' A A 575 -9.995 87.813 110.825 1.00 61.49 C
ATOM 8 O4' A A 575 -9.184 88.929 111.285 1.00 60.83 O
ATOM 9 C3' A A 575 -9.445 86.576 111.527 1.00 61.43 C
ATOM 10 O3' A A 575 -8.471 85.976 110.686 1.00 62.63 O
ATOM 11 C2' A A 575 -8.793 87.166 112.777 1.00 61.45 C
ATOM 12 O2' A A 575 -7.747 86.376 113.306 1.00 62.81 O
ATOM 13 C1' A A 575 -8.239 88.478 112.233 1.00 60.29 C
ATOM 14 N9 A A 575 -8.061 89.526 113.237 1.00 59.76 N
ATOM 15 C8 A A 575 -9.032 90.224 113.907 1.00 59.51 C
ATOM 16 N7 A A 575 -8.561 91.121 114.739 1.00 59.75 N
ATOM 17 C5 A A 575 -7.185 91.004 114.613 1.00 59.25 C
ATOM 18 C6 A A 575 -6.114 91.684 115.230 1.00 59.19 C
ATOM 19 N6 A A 575 -6.272 92.648 116.144 1.00 59.86 N
ATOM 20 N1 A A 575 -4.861 91.334 114.875 1.00 57.54 N
ATOM 21 C2 A A 575 -4.701 90.362 113.968 1.00 58.80 C
ATOM 22 N3 A A 575 -5.624 89.647 113.322 1.00 59.17 N
ATOM 23 C4 A A 575 -6.861 90.023 113.693 1.00 59.66 C
ATOM 24 P G A 576 -8.859 84.686 109.813 1.00 64.10 P
ATOM 25 OP1 G A 576 -10.276 84.372 110.097 1.00 69.09 O
ATOM 26 OP2 G A 576 -7.832 83.638 110.007 1.00 67.00 O
ATOM 27 O5' G A 576 -8.789 85.201 108.305 1.00 65.07 O
TER
ATOM 1 O3' A B 557 -2.317 95.121 117.613 1.00 57.02 O
ATOM 2 P C B 558 -3.206 94.663 118.867 1.00 58.97 P
ATOM 3 OP1 C B 558 -2.270 94.193 119.920 1.00 59.50 O
ATOM 4 OP2 C B 558 -4.282 93.751 118.383 1.00 57.86 O
ATOM 5 O5' C B 558 -3.864 96.030 119.347 1.00 58.30 O
ATOM 6 C5' C B 558 -3.051 97.196 119.544 1.00 59.53 C
ATOM 7 C4' C B 558 -3.920 98.416 119.698 1.00 62.35 C
ATOM 8 O4' C B 558 -4.716 98.594 118.497 1.00 61.79 O
ATOM 9 C3' C B 558 -4.949 98.341 120.811 1.00 62.99 C
ATOM 10 O3' C B 558 -4.385 98.658 122.077 1.00 65.88 O
ATOM 11 C2' C B 558 -5.979 99.360 120.355 1.00 63.17 C
ATOM 12 O2' C B 558 -5.549 100.684 120.595 1.00 64.60 O
ATOM 13 C1' C B 558 -5.998 99.100 118.847 1.00 62.73 C
ATOM 14 N1 C B 558 -7.019 98.114 118.431 1.00 61.54 N
ATOM 15 C2 C B 558 -8.343 98.538 118.251 1.00 62.02 C
ATOM 16 O2 C B 558 -8.634 99.730 118.463 1.00 64.96 O
ATOM 17 N3 C B 558 -9.274 97.641 117.851 1.00 60.55 N
ATOM 18 C4 C B 558 -8.928 96.371 117.635 1.00 60.45 C
ATOM 19 N4 C B 558 -9.877 95.521 117.234 1.00 60.28 N
ATOM 20 C5 C B 558 -7.595 95.913 117.819 1.00 60.75 C
ATOM 21 C6 C B 558 -6.682 96.807 118.215 1.00 61.03 C
ATOM 22 P C B 559 -4.670 97.695 123.335 1.00 66.93 P
ATOM 23 OP1 C B 559 -4.018 98.291 124.529 1.00 66.66 O
ATOM 24 OP2 C B 559 -4.358 96.292 122.948 1.00 66.31 O
ATOM 25 O5' C B 559 -6.243 97.793 123.532 1.00 68.29 O
TER
Atoms:
OP1: (-12.367,90.563,113.188)
OP2: (-14.081,88.966,112.143)
C3': (-9.445,86.576,111.527)
C1': (-8.239,88.478,112.233)
C5': (-11.457,88.131,111.062)
O4': (-9.184,88.929,111.285)
C8: (-9.032,90.224,113.907)
O2': (-7.747,86.376,113.306)
C6: (-6.114,91.684,115.230)
C5: (-7.185,91.004,114.613)
C4: (-6.861,90.023,113.693)
P: (-12.894,89.186,113.008)
C4': (-9.995,87.813,110.825)
C2': (-8.793,87.166,112.777)
C2: (-4.701,90.362,113.968)
N1: (-4.861,91.334,114.875)
N3: (-5.624,89.647,113.322)
N6: (-6.272,92.648,116.144)
N7: (-8.561,91.121,114.739)
N9: (-8.061,89.526,113.237)
O5': (-11.730,88.240,112.475)
O3': (-8.471,85.976,110.686)
OP2: (-14.081,88.966,112.143)
C3': (-9.445,86.576,111.527)
C1': (-8.239,88.478,112.233)
C5': (-11.457,88.131,111.062)
O4': (-9.184,88.929,111.285)
C8: (-9.032,90.224,113.907)
O2': (-7.747,86.376,113.306)
C6: (-6.114,91.684,115.230)
C5: (-7.185,91.004,114.613)
C4: (-6.861,90.023,113.693)
P: (-12.894,89.186,113.008)
C4': (-9.995,87.813,110.825)
C2': (-8.793,87.166,112.777)
C2: (-4.701,90.362,113.968)
N1: (-4.861,91.334,114.875)
N3: (-5.624,89.647,113.322)
N6: (-6.272,92.648,116.144)
N7: (-8.561,91.121,114.739)
N9: (-8.061,89.526,113.237)
O5': (-11.730,88.240,112.475)
O3': (-8.471,85.976,110.686)
C2: (-8.343,98.538,118.251)
OP1: (-2.270,94.193,119.920)
OP2: (-4.282,93.751,118.383)
C4: (-8.928,96.371,117.635)
O5': (-3.864,96.030,119.347)
C3': (-4.949,98.341,120.811)
C1': (-5.998,99.100,118.847)
O4': (-4.716,98.594,118.497)
C5': (-3.051,97.196,119.544)
P: (-3.206,94.663,118.867)
O2: (-8.634,99.730,118.463)
C4': (-3.920,98.416,119.698)
C2': (-5.979,99.360,120.355)
O2': (-5.549,100.684,120.595)
N1: (-7.019,98.114,118.431)
N3: (-9.274,97.641,117.851)
N4: (-9.877,95.521,117.234)
C6: (-6.682,96.807,118.215)
C5: (-7.595,95.913,117.819)
O3': (-4.385,98.658,122.077)
OP1: (-2.270,94.193,119.920)
OP2: (-4.282,93.751,118.383)
C4: (-8.928,96.371,117.635)
O5': (-3.864,96.030,119.347)
C3': (-4.949,98.341,120.811)
C1': (-5.998,99.100,118.847)
O4': (-4.716,98.594,118.497)
C5': (-3.051,97.196,119.544)
P: (-3.206,94.663,118.867)
O2: (-8.634,99.730,118.463)
C4': (-3.920,98.416,119.698)
C2': (-5.979,99.360,120.355)
O2': (-5.549,100.684,120.595)
N1: (-7.019,98.114,118.431)
N3: (-9.274,97.641,117.851)
N4: (-9.877,95.521,117.234)
C6: (-6.682,96.807,118.215)
C5: (-7.595,95.913,117.819)
O3': (-4.385,98.658,122.077)
Image (generated by PyMOL):