Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A345:A282
Extra
PDB:
ATOM 1 O3' C A 344 53.371 120.572 15.624 1.00 69.55 O
ATOM 2 P A A 345 54.407 120.230 14.447 1.00 70.19 P
ATOM 3 OP1 A A 345 53.647 119.932 13.204 1.00 70.23 O
ATOM 4 OP2 A A 345 55.412 119.259 14.946 1.00 69.91 O
ATOM 5 O5' A A 345 55.181 121.591 14.198 1.00 71.37 O
ATOM 6 C5' A A 345 56.370 121.593 13.412 1.00 72.51 C
ATOM 7 C4' A A 345 56.431 122.836 12.585 1.00 73.89 C
ATOM 8 O4' A A 345 55.413 122.808 11.546 1.00 74.89 O
ATOM 9 C3' A A 345 56.202 124.116 13.364 1.00 75.21 C
ATOM 10 O3' A A 345 57.049 125.089 12.813 1.00 76.99 O
ATOM 11 C2' A A 345 54.749 124.457 13.065 1.00 75.63 C
ATOM 12 O2' A A 345 54.498 125.850 13.148 1.00 75.65 O
ATOM 13 C1' A A 345 54.626 123.978 11.623 1.00 75.75 C
ATOM 14 N9 A A 345 53.253 123.650 11.239 1.00 76.35 N
ATOM 15 C8 A A 345 52.497 122.549 11.576 1.00 76.24 C
ATOM 16 N7 A A 345 51.285 122.569 11.080 1.00 76.49 N
ATOM 17 C5 A A 345 51.239 123.758 10.359 1.00 77.30 C
ATOM 18 C6 A A 345 50.220 124.373 9.588 1.00 77.58 C
ATOM 19 N6 A A 345 49.003 123.850 9.406 1.00 77.91 N
ATOM 20 N1 A A 345 50.502 125.562 9.007 1.00 76.64 N
ATOM 21 C2 A A 345 51.719 126.091 9.186 1.00 76.78 C
ATOM 22 N3 A A 345 52.756 125.612 9.880 1.00 77.10 N
ATOM 23 C4 A A 345 52.446 124.431 10.448 1.00 76.90 C
ATOM 24 P G A 346 58.348 125.528 13.619 1.00 78.67 P
ATOM 25 OP1 G A 346 58.656 124.450 14.604 1.00 79.16 O
ATOM 26 OP2 G A 346 58.057 126.901 14.102 1.00 79.24 O
ATOM 27 O5' G A 346 59.488 125.552 12.502 1.00 80.63 O
TER
ATOM 1 O3' A B 281 46.588 126.470 5.912 1.00 84.99 O
ATOM 2 P C B 282 45.672 126.303 7.222 1.00 84.61 P
ATOM 3 OP1 C B 282 44.827 127.520 7.348 1.00 84.71 O
ATOM 4 OP2 C B 282 46.571 125.910 8.346 1.00 85.07 O
ATOM 5 O5' C B 282 44.729 125.069 6.866 1.00 84.05 O
ATOM 6 C5' C B 282 43.928 125.076 5.666 1.00 83.17 C
ATOM 7 C4' C B 282 43.229 123.743 5.480 1.00 83.19 C
ATOM 8 O4' C B 282 44.202 122.681 5.290 1.00 82.57 O
ATOM 9 C3' C B 282 42.400 123.264 6.659 1.00 82.89 C
ATOM 10 O3' C B 282 41.115 123.845 6.677 1.00 84.26 O
ATOM 11 C2' C B 282 42.309 121.767 6.427 1.00 81.99 C
ATOM 12 O2' C B 282 41.276 121.424 5.529 1.00 81.55 O
ATOM 13 C1' C B 282 43.693 121.472 5.843 1.00 82.56 C
ATOM 14 N1 C B 282 44.616 121.001 6.886 1.00 83.48 N
ATOM 15 C2 C B 282 44.559 119.647 7.271 1.00 83.61 C
ATOM 16 O2 C B 282 43.755 118.888 6.703 1.00 83.35 O
ATOM 17 N3 C B 282 45.378 119.207 8.251 1.00 83.52 N
ATOM 18 C4 C B 282 46.226 120.053 8.844 1.00 83.07 C
ATOM 19 N4 C B 282 47.000 119.578 9.819 1.00 82.92 N
ATOM 20 C5 C B 282 46.315 121.428 8.463 1.00 83.30 C
ATOM 21 C6 C B 282 45.502 121.855 7.489 1.00 83.58 C
ATOM 22 P C B 283 40.438 124.178 8.083 1.00 85.56 P
ATOM 23 OP1 C B 283 39.024 124.569 7.864 1.00 86.30 O
ATOM 24 OP2 C B 283 41.365 125.118 8.771 1.00 86.61 O
ATOM 25 O5' C B 283 40.458 122.780 8.844 1.00 85.44 O
TER
ATOM 2 P A A 345 54.407 120.230 14.447 1.00 70.19 P
ATOM 3 OP1 A A 345 53.647 119.932 13.204 1.00 70.23 O
ATOM 4 OP2 A A 345 55.412 119.259 14.946 1.00 69.91 O
ATOM 5 O5' A A 345 55.181 121.591 14.198 1.00 71.37 O
ATOM 6 C5' A A 345 56.370 121.593 13.412 1.00 72.51 C
ATOM 7 C4' A A 345 56.431 122.836 12.585 1.00 73.89 C
ATOM 8 O4' A A 345 55.413 122.808 11.546 1.00 74.89 O
ATOM 9 C3' A A 345 56.202 124.116 13.364 1.00 75.21 C
ATOM 10 O3' A A 345 57.049 125.089 12.813 1.00 76.99 O
ATOM 11 C2' A A 345 54.749 124.457 13.065 1.00 75.63 C
ATOM 12 O2' A A 345 54.498 125.850 13.148 1.00 75.65 O
ATOM 13 C1' A A 345 54.626 123.978 11.623 1.00 75.75 C
ATOM 14 N9 A A 345 53.253 123.650 11.239 1.00 76.35 N
ATOM 15 C8 A A 345 52.497 122.549 11.576 1.00 76.24 C
ATOM 16 N7 A A 345 51.285 122.569 11.080 1.00 76.49 N
ATOM 17 C5 A A 345 51.239 123.758 10.359 1.00 77.30 C
ATOM 18 C6 A A 345 50.220 124.373 9.588 1.00 77.58 C
ATOM 19 N6 A A 345 49.003 123.850 9.406 1.00 77.91 N
ATOM 20 N1 A A 345 50.502 125.562 9.007 1.00 76.64 N
ATOM 21 C2 A A 345 51.719 126.091 9.186 1.00 76.78 C
ATOM 22 N3 A A 345 52.756 125.612 9.880 1.00 77.10 N
ATOM 23 C4 A A 345 52.446 124.431 10.448 1.00 76.90 C
ATOM 24 P G A 346 58.348 125.528 13.619 1.00 78.67 P
ATOM 25 OP1 G A 346 58.656 124.450 14.604 1.00 79.16 O
ATOM 26 OP2 G A 346 58.057 126.901 14.102 1.00 79.24 O
ATOM 27 O5' G A 346 59.488 125.552 12.502 1.00 80.63 O
TER
ATOM 1 O3' A B 281 46.588 126.470 5.912 1.00 84.99 O
ATOM 2 P C B 282 45.672 126.303 7.222 1.00 84.61 P
ATOM 3 OP1 C B 282 44.827 127.520 7.348 1.00 84.71 O
ATOM 4 OP2 C B 282 46.571 125.910 8.346 1.00 85.07 O
ATOM 5 O5' C B 282 44.729 125.069 6.866 1.00 84.05 O
ATOM 6 C5' C B 282 43.928 125.076 5.666 1.00 83.17 C
ATOM 7 C4' C B 282 43.229 123.743 5.480 1.00 83.19 C
ATOM 8 O4' C B 282 44.202 122.681 5.290 1.00 82.57 O
ATOM 9 C3' C B 282 42.400 123.264 6.659 1.00 82.89 C
ATOM 10 O3' C B 282 41.115 123.845 6.677 1.00 84.26 O
ATOM 11 C2' C B 282 42.309 121.767 6.427 1.00 81.99 C
ATOM 12 O2' C B 282 41.276 121.424 5.529 1.00 81.55 O
ATOM 13 C1' C B 282 43.693 121.472 5.843 1.00 82.56 C
ATOM 14 N1 C B 282 44.616 121.001 6.886 1.00 83.48 N
ATOM 15 C2 C B 282 44.559 119.647 7.271 1.00 83.61 C
ATOM 16 O2 C B 282 43.755 118.888 6.703 1.00 83.35 O
ATOM 17 N3 C B 282 45.378 119.207 8.251 1.00 83.52 N
ATOM 18 C4 C B 282 46.226 120.053 8.844 1.00 83.07 C
ATOM 19 N4 C B 282 47.000 119.578 9.819 1.00 82.92 N
ATOM 20 C5 C B 282 46.315 121.428 8.463 1.00 83.30 C
ATOM 21 C6 C B 282 45.502 121.855 7.489 1.00 83.58 C
ATOM 22 P C B 283 40.438 124.178 8.083 1.00 85.56 P
ATOM 23 OP1 C B 283 39.024 124.569 7.864 1.00 86.30 O
ATOM 24 OP2 C B 283 41.365 125.118 8.771 1.00 86.61 O
ATOM 25 O5' C B 283 40.458 122.780 8.844 1.00 85.44 O
TER
Atoms:
OP1: (53.647,119.932,13.204)
OP2: (55.412,119.259,14.946)
C3': (56.202,124.116,13.364)
C1': (54.626,123.978,11.623)
C5': (56.370,121.593,13.412)
O4': (55.413,122.808,11.546)
C8: (52.497,122.549,11.576)
O2': (54.498,125.850,13.148)
C6: (50.220,124.373,9.588)
C5: (51.239,123.758,10.359)
C4: (52.446,124.431,10.448)
P: (54.407,120.230,14.447)
C4': (56.431,122.836,12.585)
C2': (54.749,124.457,13.065)
C2: (51.719,126.091,9.186)
N1: (50.502,125.562,9.007)
N3: (52.756,125.612,9.880)
N6: (49.003,123.850,9.406)
N7: (51.285,122.569,11.080)
N9: (53.253,123.650,11.239)
O5': (55.181,121.591,14.198)
O3': (57.049,125.089,12.813)
OP2: (55.412,119.259,14.946)
C3': (56.202,124.116,13.364)
C1': (54.626,123.978,11.623)
C5': (56.370,121.593,13.412)
O4': (55.413,122.808,11.546)
C8: (52.497,122.549,11.576)
O2': (54.498,125.850,13.148)
C6: (50.220,124.373,9.588)
C5: (51.239,123.758,10.359)
C4: (52.446,124.431,10.448)
P: (54.407,120.230,14.447)
C4': (56.431,122.836,12.585)
C2': (54.749,124.457,13.065)
C2: (51.719,126.091,9.186)
N1: (50.502,125.562,9.007)
N3: (52.756,125.612,9.880)
N6: (49.003,123.850,9.406)
N7: (51.285,122.569,11.080)
N9: (53.253,123.650,11.239)
O5': (55.181,121.591,14.198)
O3': (57.049,125.089,12.813)
C2: (44.559,119.647,7.271)
OP1: (44.827,127.520,7.348)
OP2: (46.571,125.910,8.346)
C4: (46.226,120.053,8.844)
O5': (44.729,125.069,6.866)
C3': (42.400,123.264,6.659)
C1': (43.693,121.472,5.843)
O4': (44.202,122.681,5.290)
C5': (43.928,125.076,5.666)
P: (45.672,126.303,7.222)
O2: (43.755,118.888,6.703)
C4': (43.229,123.743,5.480)
C2': (42.309,121.767,6.427)
O2': (41.276,121.424,5.529)
N1: (44.616,121.001,6.886)
N3: (45.378,119.207,8.251)
N4: (47.000,119.578,9.819)
C6: (45.502,121.855,7.489)
C5: (46.315,121.428,8.463)
O3': (41.115,123.845,6.677)
OP1: (44.827,127.520,7.348)
OP2: (46.571,125.910,8.346)
C4: (46.226,120.053,8.844)
O5': (44.729,125.069,6.866)
C3': (42.400,123.264,6.659)
C1': (43.693,121.472,5.843)
O4': (44.202,122.681,5.290)
C5': (43.928,125.076,5.666)
P: (45.672,126.303,7.222)
O2: (43.755,118.888,6.703)
C4': (43.229,123.743,5.480)
C2': (42.309,121.767,6.427)
O2': (41.276,121.424,5.529)
N1: (44.616,121.001,6.886)
N3: (45.378,119.207,8.251)
N4: (47.000,119.578,9.819)
C6: (45.502,121.855,7.489)
C5: (46.315,121.428,8.463)
O3': (41.115,123.845,6.677)
Image (generated by PyMOL):