ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:01082:01197

Extra

PDB:
ATOM 1 O3' U A1081 31.467 103.154 124.380 1.00 37.20 O
ATOM 2 P A A1082 32.124 103.795 123.053 1.00 38.69 P
ATOM 3 OP1 A A1082 31.992 105.281 123.105 1.00 35.27 O
ATOM 4 OP2 A A1082 31.576 103.039 121.887 1.00 36.13 O
ATOM 5 O5' A A1082 33.666 103.435 123.180 1.00 38.71 O
ATOM 6 C5' A A1082 34.106 102.067 123.170 1.00 39.93 C
ATOM 7 C4' A A1082 35.102 101.872 122.063 1.00 41.60 C
ATOM 8 O4' A A1082 36.133 102.886 122.168 1.00 43.05 O
ATOM 9 C3' A A1082 35.826 100.535 122.006 1.00 42.13 C
ATOM 10 O3' A A1082 36.099 100.275 120.633 1.00 44.24 O
ATOM 11 C2' A A1082 37.136 100.844 122.725 1.00 41.03 C
ATOM 12 O2' A A1082 38.189 100.004 122.307 1.00 41.67 O
ATOM 13 C1' A A1082 37.400 102.267 122.242 1.00 41.92 C
ATOM 14 N9 A A1082 38.260 103.112 123.071 1.00 40.89 N
ATOM 15 C8 A A1082 38.632 102.968 124.383 1.00 41.01 C
ATOM 16 N7 A A1082 39.367 103.956 124.834 1.00 41.67 N
ATOM 17 C5 A A1082 39.496 104.800 123.740 1.00 40.72 C
ATOM 18 C6 A A1082 40.139 106.041 123.569 1.00 41.30 C
ATOM 19 N6 A A1082 40.789 106.682 124.545 1.00 40.38 N
ATOM 20 N1 A A1082 40.079 106.614 122.347 1.00 40.84 N
ATOM 21 C2 A A1082 39.409 105.982 121.376 1.00 40.16 C
ATOM 22 N3 A A1082 38.757 104.828 121.419 1.00 38.79 N
ATOM 23 C4 A A1082 38.838 104.282 122.644 1.00 40.14 C
ATOM 24 P A A1083 35.022 99.488 119.734 1.00 46.29 P
ATOM 25 OP1 A A1083 35.475 99.645 118.328 1.00 47.65 O
ATOM 26 OP2 A A1083 33.638 99.884 120.104 1.00 48.75 O
ATOM 27 O5' A A1083 35.214 97.972 120.159 1.00 42.70 O
TER

ATOM 1 O3' U B1196 39.494 111.383 126.345 1.00 40.21 O
ATOM 2 P C B1197 39.547 109.874 125.815 1.00 42.02 P
ATOM 3 OP1 C B1197 39.336 108.983 126.986 1.00 40.67 O
ATOM 4 OP2 C B1197 40.767 109.716 124.986 1.00 43.44 O
ATOM 5 O5' C B1197 38.262 109.794 124.877 1.00 40.45 O
ATOM 6 C5' C B1197 38.187 108.863 123.797 1.00 37.17 C
ATOM 7 C4' C B1197 36.934 108.033 123.908 1.00 36.57 C
ATOM 8 O4' C B1197 36.191 108.376 125.108 1.00 35.72 O
ATOM 9 C3' C B1197 35.912 108.234 122.807 1.00 35.90 C
ATOM 10 O3' C B1197 36.276 107.523 121.633 1.00 36.31 O
ATOM 11 C2' C B1197 34.653 107.649 123.440 1.00 35.24 C
ATOM 12 O2' C B1197 34.607 106.232 123.390 1.00 33.89 O
ATOM 13 C1' C B1197 34.811 108.109 124.894 1.00 33.80 C
ATOM 14 N1 C B1197 34.013 109.311 125.217 1.00 31.88 N
ATOM 15 C2 C B1197 32.631 109.163 125.382 1.00 30.58 C
ATOM 16 O2 C B1197 32.133 108.043 125.261 1.00 31.54 O
ATOM 17 N3 C B1197 31.875 110.242 125.662 1.00 29.23 N
ATOM 18 C4 C B1197 32.443 111.439 125.776 1.00 30.21 C
ATOM 19 N4 C B1197 31.647 112.478 126.036 1.00 30.58 N
ATOM 20 C5 C B1197 33.852 111.625 125.625 1.00 29.48 C
ATOM 21 C6 C B1197 34.592 110.543 125.350 1.00 30.94 C
ATOM 22 P G B1198 36.836 108.320 120.359 1.00 35.95 P
ATOM 23 OP1 G B1198 36.716 107.395 119.201 1.00 37.32 O
ATOM 24 OP2 G B1198 38.159 108.892 120.719 1.00 35.68 O
ATOM 25 O5' G B1198 35.827 109.533 120.152 1.00 33.69 O
TER

Atoms:
OP1: (31.992,105.281,123.105)
OP2: (31.576,103.039,121.887)
C3': (35.826,100.535,122.006)
C1': (37.400,102.267,122.242)
C5': (34.106,102.067,123.170)
O4': (36.133,102.886,122.168)
C8: (38.632,102.968,124.383)
O2': (38.189,100.004,122.307)
C6: (40.139,106.041,123.569)
C5: (39.496,104.800,123.740)
C4: (38.838,104.282,122.644)
P: (32.124,103.795,123.053)
C4': (35.102,101.872,122.063)
C2': (37.136,100.844,122.725)
C2: (39.409,105.982,121.376)
N1: (40.079,106.614,122.347)
N3: (38.757,104.828,121.419)
N6: (40.789,106.682,124.545)
N7: (39.367,103.956,124.834)
N9: (38.260,103.112,123.071)
O5': (33.666,103.435,123.180)
O3': (36.099,100.275,120.633)
C2: (32.631,109.163,125.382)
OP1: (39.336,108.983,126.986)
OP2: (40.767,109.716,124.986)
C4: (32.443,111.439,125.776)
O5': (38.262,109.794,124.877)
C3': (35.912,108.234,122.807)
C1': (34.811,108.109,124.894)
O4': (36.191,108.376,125.108)
C5': (38.187,108.863,123.797)
P: (39.547,109.874,125.815)
O2: (32.133,108.043,125.261)
C4': (36.934,108.033,123.908)
C2': (34.653,107.649,123.440)
O2': (34.607,106.232,123.390)
N1: (34.013,109.311,125.217)
N3: (31.875,110.242,125.662)
N4: (31.647,112.478,126.036)
C6: (34.592,110.543,125.350)
C5: (33.852,111.625,125.625)
O3': (36.276,107.523,121.633)
Image (generated by PyMOL):
PyMOL image
show in jmol