ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K9M:A345:A282

Extra

PDB:
ATOM 1 O3' C A 344 53.559 120.300 15.717 1.00 65.42 O
ATOM 2 P A A 345 54.620 119.950 14.564 1.00 66.01 P
ATOM 3 OP1 A A 345 53.866 119.649 13.328 1.00 65.51 O
ATOM 4 OP2 A A 345 55.601 118.966 15.100 1.00 64.48 O
ATOM 5 O5' A A 345 55.401 121.305 14.298 1.00 66.55 O
ATOM 6 C5' A A 345 56.547 121.310 13.438 1.00 67.87 C
ATOM 7 C4' A A 345 56.593 122.584 12.640 1.00 69.39 C
ATOM 8 O4' A A 345 55.588 122.573 11.585 1.00 70.30 O
ATOM 9 C3' A A 345 56.380 123.866 13.425 1.00 70.31 C
ATOM 10 O3' A A 345 57.266 124.821 12.871 1.00 72.25 O
ATOM 11 C2' A A 345 54.922 124.208 13.116 1.00 70.71 C
ATOM 12 O2' A A 345 54.610 125.585 13.237 1.00 70.47 O
ATOM 13 C1' A A 345 54.805 123.747 11.662 1.00 70.93 C
ATOM 14 N9 A A 345 53.433 123.424 11.258 1.00 71.57 N
ATOM 15 C8 A A 345 52.678 122.325 11.605 1.00 71.41 C
ATOM 16 N7 A A 345 51.460 122.351 11.126 1.00 71.49 N
ATOM 17 C5 A A 345 51.407 123.537 10.403 1.00 72.33 C
ATOM 18 C6 A A 345 50.371 124.157 9.657 1.00 72.90 C
ATOM 19 N6 A A 345 49.138 123.656 9.527 1.00 73.39 N
ATOM 20 N1 A A 345 50.649 125.332 9.050 1.00 72.37 N
ATOM 21 C2 A A 345 51.879 125.847 9.189 1.00 72.49 C
ATOM 22 N3 A A 345 52.931 125.367 9.869 1.00 72.36 N
ATOM 23 C4 A A 345 52.622 124.199 10.461 1.00 72.16 C
ATOM 24 P G A 346 58.622 125.185 13.644 1.00 73.08 P
ATOM 25 OP1 G A 346 58.979 124.115 14.608 1.00 73.07 O
ATOM 26 OP2 G A 346 58.409 126.571 14.122 1.00 75.05 O
ATOM 27 O5' G A 346 59.734 125.202 12.506 1.00 74.34 O
TER

ATOM 1 O3' A B 281 46.774 126.202 5.989 1.00 78.20 O
ATOM 2 P C B 282 45.871 125.990 7.297 1.00 79.21 P
ATOM 3 OP1 C B 282 45.024 127.200 7.482 1.00 78.86 O
ATOM 4 OP2 C B 282 46.801 125.565 8.386 1.00 79.28 O
ATOM 5 O5' C B 282 44.932 124.757 6.910 1.00 79.85 O
ATOM 6 C5' C B 282 44.082 124.818 5.741 1.00 80.93 C
ATOM 7 C4' C B 282 43.367 123.500 5.525 1.00 81.48 C
ATOM 8 O4' C B 282 44.330 122.428 5.332 1.00 81.17 O
ATOM 9 C3' C B 282 42.528 123.019 6.694 1.00 82.09 C
ATOM 10 O3' C B 282 41.253 123.617 6.711 1.00 83.81 O
ATOM 11 C2' C B 282 42.422 121.525 6.449 1.00 81.58 C
ATOM 12 O2' C B 282 41.396 121.186 5.540 1.00 81.96 O
ATOM 13 C1' C B 282 43.812 121.220 5.883 1.00 81.90 C
ATOM 14 N1 C B 282 44.726 120.746 6.934 1.00 82.61 N
ATOM 15 C2 C B 282 44.661 119.392 7.329 1.00 82.79 C
ATOM 16 O2 C B 282 43.853 118.633 6.765 1.00 82.36 O
ATOM 17 N3 C B 282 45.479 118.953 8.316 1.00 83.23 N
ATOM 18 C4 C B 282 46.335 119.801 8.897 1.00 83.09 C
ATOM 19 N4 C B 282 47.121 119.334 9.870 1.00 83.01 N
ATOM 20 C5 C B 282 46.426 121.173 8.507 1.00 83.06 C
ATOM 21 C6 C B 282 45.615 121.599 7.532 1.00 82.93 C
ATOM 22 P C B 283 40.575 123.957 8.117 1.00 85.45 P
ATOM 23 OP1 C B 283 39.158 124.333 7.879 1.00 85.52 O
ATOM 24 OP2 C B 283 41.490 124.919 8.792 1.00 86.22 O
ATOM 25 O5' C B 283 40.601 122.565 8.892 1.00 84.79 O
TER

Atoms:
OP1: (53.866,119.649,13.328)
OP2: (55.601,118.966,15.100)
C3': (56.380,123.866,13.425)
C1': (54.805,123.747,11.662)
C5': (56.547,121.310,13.438)
O4': (55.588,122.573,11.585)
C8: (52.678,122.325,11.605)
O2': (54.610,125.585,13.237)
C6: (50.371,124.157,9.657)
C5: (51.407,123.537,10.403)
C4: (52.622,124.199,10.461)
P: (54.620,119.950,14.564)
C4': (56.593,122.584,12.640)
C2': (54.922,124.208,13.116)
C2: (51.879,125.847,9.189)
N1: (50.649,125.332,9.050)
N3: (52.931,125.367,9.869)
N6: (49.138,123.656,9.527)
N7: (51.460,122.351,11.126)
N9: (53.433,123.424,11.258)
O5': (55.401,121.305,14.298)
O3': (57.266,124.821,12.871)
C2: (44.661,119.392,7.329)
OP1: (45.024,127.200,7.482)
OP2: (46.801,125.565,8.386)
C4: (46.335,119.801,8.897)
O5': (44.932,124.757,6.910)
C3': (42.528,123.019,6.694)
C1': (43.812,121.220,5.883)
O4': (44.330,122.428,5.332)
C5': (44.082,124.818,5.741)
P: (45.871,125.990,7.297)
O2: (43.853,118.633,6.765)
C4': (43.367,123.500,5.525)
C2': (42.422,121.525,6.449)
O2': (41.396,121.186,5.540)
N1: (44.726,120.746,6.934)
N3: (45.479,118.953,8.316)
N4: (47.121,119.334,9.870)
C6: (45.615,121.599,7.532)
C5: (46.426,121.173,8.507)
O3': (41.253,123.617,6.711)
Image (generated by PyMOL):
PyMOL image
show in jmol