Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02329:02449
Extra
PDB:
ATOM 1 O3' C A2328 68.062 117.292 107.245 1.00 43.25 O
ATOM 2 P A A2329 67.292 116.463 108.375 1.00 43.40 P
ATOM 3 OP1 A A2329 67.895 116.862 109.666 1.00 42.52 O
ATOM 4 OP2 A A2329 67.256 115.030 107.986 1.00 41.84 O
ATOM 5 O5' A A2329 65.800 117.002 108.289 1.00 44.52 O
ATOM 6 C5' A A2329 65.462 118.333 108.701 1.00 46.28 C
ATOM 7 C4' A A2329 64.006 118.597 108.422 1.00 48.03 C
ATOM 8 O4' A A2329 63.796 118.618 106.988 1.00 50.56 O
ATOM 9 C3' A A2329 63.043 117.525 108.904 1.00 47.44 C
ATOM 10 O3' A A2329 62.729 117.656 110.278 1.00 46.81 O
ATOM 11 C2' A A2329 61.841 117.762 108.010 1.00 47.64 C
ATOM 12 O2' A A2329 61.114 118.896 108.414 1.00 45.43 O
ATOM 13 C1' A A2329 62.524 118.067 106.678 1.00 50.38 C
ATOM 14 N9 A A2329 62.723 116.869 105.854 1.00 53.78 N
ATOM 15 C8 A A2329 63.869 116.128 105.708 1.00 54.45 C
ATOM 16 N7 A A2329 63.731 115.086 104.926 1.00 54.61 N
ATOM 17 C5 A A2329 62.408 115.147 104.523 1.00 56.11 C
ATOM 18 C6 A A2329 61.639 114.318 103.696 1.00 58.74 C
ATOM 19 N6 A A2329 62.119 113.221 103.097 1.00 61.60 N
ATOM 20 N1 A A2329 60.343 114.650 103.501 1.00 59.34 N
ATOM 21 C2 A A2329 59.867 115.746 104.101 1.00 58.23 C
ATOM 22 N3 A A2329 60.491 116.606 104.901 1.00 58.10 N
ATOM 23 C4 A A2329 61.776 116.244 105.077 1.00 55.80 C
ATOM 24 P G A2330 62.270 116.364 111.107 1.00 48.77 P
ATOM 25 OP1 G A2330 62.041 116.771 112.518 1.00 49.13 O
ATOM 26 OP2 G A2330 63.206 115.251 110.811 1.00 48.23 O
ATOM 27 O5' G A2330 60.857 116.008 110.472 1.00 47.00 O
TER
ATOM 1 O3' U B2448 61.826 121.860 110.875 1.00 34.90 O
ATOM 2 P C B2449 63.362 122.283 111.021 1.00 34.49 P
ATOM 3 OP1 C B2449 63.451 123.530 111.808 1.00 35.41 O
ATOM 4 OP2 C B2449 63.973 122.232 109.681 1.00 33.08 O
ATOM 5 O5' C B2449 63.967 121.091 111.882 1.00 35.86 O
ATOM 6 C5' C B2449 63.290 120.607 113.061 1.00 37.66 C
ATOM 7 C4' C B2449 64.271 120.444 114.198 1.00 39.02 C
ATOM 8 O4' C B2449 65.202 119.371 113.909 1.00 39.96 O
ATOM 9 C3' C B2449 65.145 121.657 114.466 1.00 39.46 C
ATOM 10 O3' C B2449 64.450 122.557 115.314 1.00 39.23 O
ATOM 11 C2' C B2449 66.369 121.046 115.139 1.00 41.90 C
ATOM 12 O2' C B2449 66.200 120.809 116.527 1.00 44.13 O
ATOM 13 C1' C B2449 66.486 119.711 114.395 1.00 40.21 C
ATOM 14 N1 C B2449 67.401 119.754 113.251 1.00 40.28 N
ATOM 15 C2 C B2449 68.755 119.515 113.466 1.00 42.13 C
ATOM 16 O2 C B2449 69.150 119.295 114.620 1.00 42.03 O
ATOM 17 N3 C B2449 69.601 119.535 112.412 1.00 43.51 N
ATOM 18 C4 C B2449 69.132 119.794 111.187 1.00 43.66 C
ATOM 19 N4 C B2449 69.996 119.802 110.177 1.00 46.04 N
ATOM 20 C5 C B2449 67.756 120.054 110.946 1.00 40.88 C
ATOM 21 C6 C B2449 66.936 120.021 111.993 1.00 39.74 C
ATOM 22 P G B2450 64.678 124.130 115.171 1.00 39.38 P
ATOM 23 OP1 G B2450 65.052 124.413 113.767 1.00 39.70 O
ATOM 24 OP2 G B2450 65.608 124.499 116.271 1.00 37.45 O
ATOM 25 O5' G B2450 63.232 124.770 115.439 1.00 37.59 O
TER
ATOM 2 P A A2329 67.292 116.463 108.375 1.00 43.40 P
ATOM 3 OP1 A A2329 67.895 116.862 109.666 1.00 42.52 O
ATOM 4 OP2 A A2329 67.256 115.030 107.986 1.00 41.84 O
ATOM 5 O5' A A2329 65.800 117.002 108.289 1.00 44.52 O
ATOM 6 C5' A A2329 65.462 118.333 108.701 1.00 46.28 C
ATOM 7 C4' A A2329 64.006 118.597 108.422 1.00 48.03 C
ATOM 8 O4' A A2329 63.796 118.618 106.988 1.00 50.56 O
ATOM 9 C3' A A2329 63.043 117.525 108.904 1.00 47.44 C
ATOM 10 O3' A A2329 62.729 117.656 110.278 1.00 46.81 O
ATOM 11 C2' A A2329 61.841 117.762 108.010 1.00 47.64 C
ATOM 12 O2' A A2329 61.114 118.896 108.414 1.00 45.43 O
ATOM 13 C1' A A2329 62.524 118.067 106.678 1.00 50.38 C
ATOM 14 N9 A A2329 62.723 116.869 105.854 1.00 53.78 N
ATOM 15 C8 A A2329 63.869 116.128 105.708 1.00 54.45 C
ATOM 16 N7 A A2329 63.731 115.086 104.926 1.00 54.61 N
ATOM 17 C5 A A2329 62.408 115.147 104.523 1.00 56.11 C
ATOM 18 C6 A A2329 61.639 114.318 103.696 1.00 58.74 C
ATOM 19 N6 A A2329 62.119 113.221 103.097 1.00 61.60 N
ATOM 20 N1 A A2329 60.343 114.650 103.501 1.00 59.34 N
ATOM 21 C2 A A2329 59.867 115.746 104.101 1.00 58.23 C
ATOM 22 N3 A A2329 60.491 116.606 104.901 1.00 58.10 N
ATOM 23 C4 A A2329 61.776 116.244 105.077 1.00 55.80 C
ATOM 24 P G A2330 62.270 116.364 111.107 1.00 48.77 P
ATOM 25 OP1 G A2330 62.041 116.771 112.518 1.00 49.13 O
ATOM 26 OP2 G A2330 63.206 115.251 110.811 1.00 48.23 O
ATOM 27 O5' G A2330 60.857 116.008 110.472 1.00 47.00 O
TER
ATOM 1 O3' U B2448 61.826 121.860 110.875 1.00 34.90 O
ATOM 2 P C B2449 63.362 122.283 111.021 1.00 34.49 P
ATOM 3 OP1 C B2449 63.451 123.530 111.808 1.00 35.41 O
ATOM 4 OP2 C B2449 63.973 122.232 109.681 1.00 33.08 O
ATOM 5 O5' C B2449 63.967 121.091 111.882 1.00 35.86 O
ATOM 6 C5' C B2449 63.290 120.607 113.061 1.00 37.66 C
ATOM 7 C4' C B2449 64.271 120.444 114.198 1.00 39.02 C
ATOM 8 O4' C B2449 65.202 119.371 113.909 1.00 39.96 O
ATOM 9 C3' C B2449 65.145 121.657 114.466 1.00 39.46 C
ATOM 10 O3' C B2449 64.450 122.557 115.314 1.00 39.23 O
ATOM 11 C2' C B2449 66.369 121.046 115.139 1.00 41.90 C
ATOM 12 O2' C B2449 66.200 120.809 116.527 1.00 44.13 O
ATOM 13 C1' C B2449 66.486 119.711 114.395 1.00 40.21 C
ATOM 14 N1 C B2449 67.401 119.754 113.251 1.00 40.28 N
ATOM 15 C2 C B2449 68.755 119.515 113.466 1.00 42.13 C
ATOM 16 O2 C B2449 69.150 119.295 114.620 1.00 42.03 O
ATOM 17 N3 C B2449 69.601 119.535 112.412 1.00 43.51 N
ATOM 18 C4 C B2449 69.132 119.794 111.187 1.00 43.66 C
ATOM 19 N4 C B2449 69.996 119.802 110.177 1.00 46.04 N
ATOM 20 C5 C B2449 67.756 120.054 110.946 1.00 40.88 C
ATOM 21 C6 C B2449 66.936 120.021 111.993 1.00 39.74 C
ATOM 22 P G B2450 64.678 124.130 115.171 1.00 39.38 P
ATOM 23 OP1 G B2450 65.052 124.413 113.767 1.00 39.70 O
ATOM 24 OP2 G B2450 65.608 124.499 116.271 1.00 37.45 O
ATOM 25 O5' G B2450 63.232 124.770 115.439 1.00 37.59 O
TER
Atoms:
OP1: (67.895,116.862,109.666)
OP2: (67.256,115.030,107.986)
C3': (63.043,117.525,108.904)
C1': (62.524,118.067,106.678)
C5': (65.462,118.333,108.701)
O4': (63.796,118.618,106.988)
C8: (63.869,116.128,105.708)
O2': (61.114,118.896,108.414)
C6: (61.639,114.318,103.696)
C5: (62.408,115.147,104.523)
C4: (61.776,116.244,105.077)
P: (67.292,116.463,108.375)
C4': (64.006,118.597,108.422)
C2': (61.841,117.762,108.010)
C2: (59.867,115.746,104.101)
N1: (60.343,114.650,103.501)
N3: (60.491,116.606,104.901)
N6: (62.119,113.221,103.097)
N7: (63.731,115.086,104.926)
N9: (62.723,116.869,105.854)
O5': (65.800,117.002,108.289)
O3': (62.729,117.656,110.278)
OP2: (67.256,115.030,107.986)
C3': (63.043,117.525,108.904)
C1': (62.524,118.067,106.678)
C5': (65.462,118.333,108.701)
O4': (63.796,118.618,106.988)
C8: (63.869,116.128,105.708)
O2': (61.114,118.896,108.414)
C6: (61.639,114.318,103.696)
C5: (62.408,115.147,104.523)
C4: (61.776,116.244,105.077)
P: (67.292,116.463,108.375)
C4': (64.006,118.597,108.422)
C2': (61.841,117.762,108.010)
C2: (59.867,115.746,104.101)
N1: (60.343,114.650,103.501)
N3: (60.491,116.606,104.901)
N6: (62.119,113.221,103.097)
N7: (63.731,115.086,104.926)
N9: (62.723,116.869,105.854)
O5': (65.800,117.002,108.289)
O3': (62.729,117.656,110.278)
C2: (68.755,119.515,113.466)
OP1: (63.451,123.530,111.808)
OP2: (63.973,122.232,109.681)
C4: (69.132,119.794,111.187)
O5': (63.967,121.091,111.882)
C3': (65.145,121.657,114.466)
C1': (66.486,119.711,114.395)
O4': (65.202,119.371,113.909)
C5': (63.290,120.607,113.061)
P: (63.362,122.283,111.021)
O2: (69.150,119.295,114.620)
C4': (64.271,120.444,114.198)
C2': (66.369,121.046,115.139)
O2': (66.200,120.809,116.527)
N1: (67.401,119.754,113.251)
N3: (69.601,119.535,112.412)
N4: (69.996,119.802,110.177)
C6: (66.936,120.021,111.993)
C5: (67.756,120.054,110.946)
O3': (64.450,122.557,115.314)
OP1: (63.451,123.530,111.808)
OP2: (63.973,122.232,109.681)
C4: (69.132,119.794,111.187)
O5': (63.967,121.091,111.882)
C3': (65.145,121.657,114.466)
C1': (66.486,119.711,114.395)
O4': (65.202,119.371,113.909)
C5': (63.290,120.607,113.061)
P: (63.362,122.283,111.021)
O2: (69.150,119.295,114.620)
C4': (64.271,120.444,114.198)
C2': (66.369,121.046,115.139)
O2': (66.200,120.809,116.527)
N1: (67.401,119.754,113.251)
N3: (69.601,119.535,112.412)
N4: (69.996,119.802,110.177)
C6: (66.936,120.021,111.993)
C5: (67.756,120.054,110.946)
O3': (64.450,122.557,115.314)
Image (generated by PyMOL):