ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A180:A181

Extra

PDB:
ATOM 1 O3' C A 179 -85.637 -44.693 43.508 1.00 4.32 O
ATOM 2 P A A 180 -84.834 -44.638 44.897 1.00 14.25 P
ATOM 3 OP1 A A 180 -83.404 -44.412 44.559 1.00 14.25 O
ATOM 4 OP2 A A 180 -85.218 -45.799 45.751 1.00 14.25 O
ATOM 5 O5' A A 180 -85.449 -43.367 45.625 1.00 34.44 O
ATOM 6 C5' A A 180 -84.752 -42.119 45.629 1.00 34.44 C
ATOM 7 C4' A A 180 -85.368 -41.177 46.636 1.00 34.44 C
ATOM 8 O4' A A 180 -86.479 -40.440 46.057 1.00 34.44 O
ATOM 9 C3' A A 180 -85.863 -41.786 47.944 1.00 34.44 C
ATOM 10 O3' A A 180 -85.430 -40.968 49.018 1.00 34.44 O
ATOM 11 C2' A A 180 -87.382 -41.714 47.803 1.00 34.44 C
ATOM 12 O2' A A 180 -88.019 -41.520 49.042 1.00 34.44 O
ATOM 13 C1' A A 180 -87.557 -40.457 46.956 1.00 34.44 C
ATOM 14 N9 A A 180 -88.800 -40.331 46.198 1.00 0.93 N
ATOM 15 C8 A A 180 -89.894 -41.150 46.161 1.00 0.93 C
ATOM 16 N7 A A 180 -90.876 -40.685 45.425 1.00 0.93 N
ATOM 17 C5 A A 180 -90.383 -39.488 44.934 1.00 0.93 C
ATOM 18 C6 A A 180 -90.933 -38.512 44.094 1.00 0.93 C
ATOM 19 N6 A A 180 -92.168 -38.568 43.593 1.00 0.93 N
ATOM 20 N1 A A 180 -90.167 -37.454 43.777 1.00 0.93 N
ATOM 21 C2 A A 180 -88.945 -37.385 44.275 1.00 0.93 C
ATOM 22 N3 A A 180 -88.318 -38.229 45.080 1.00 0.93 N
ATOM 23 C4 A A 180 -89.102 -39.273 45.379 1.00 0.93 C
ATOM 24 P U A 181 -84.359 -41.539 50.075 1.00 10.28 P
ATOM 25 OP1 U A 181 -83.346 -40.465 50.290 1.00 30.52 O
ATOM 26 OP2 U A 181 -83.897 -42.888 49.671 1.00 30.52 O
ATOM 27 O5' U A 181 -85.221 -41.666 51.414 1.00 0.79 O
TER

ATOM 1 O3' A B 180 -85.430 -40.968 49.018 1.00 34.44 O
ATOM 2 P U B 181 -84.359 -41.539 50.075 1.00 10.28 P
ATOM 3 OP1 U B 181 -83.346 -40.465 50.290 1.00 30.52 O
ATOM 4 OP2 U B 181 -83.897 -42.888 49.671 1.00 30.52 O
ATOM 5 O5' U B 181 -85.221 -41.666 51.414 1.00 0.79 O
ATOM 6 C5' U B 181 -85.559 -40.482 52.163 1.00 0.79 C
ATOM 7 C4' U B 181 -86.597 -40.772 53.216 1.00 0.79 C
ATOM 8 O4' U B 181 -87.874 -41.074 52.607 1.00 0.79 O
ATOM 9 C3' U B 181 -86.324 -41.934 54.146 1.00 0.79 C
ATOM 10 O3' U B 181 -85.431 -41.582 55.184 1.00 0.79 O
ATOM 11 C2' U B 181 -87.716 -42.268 54.664 1.00 0.79 C
ATOM 12 O2' U B 181 -88.140 -41.479 55.750 1.00 0.79 O
ATOM 13 C1' U B 181 -88.600 -41.941 53.457 1.00 0.79 C
ATOM 14 N1 U B 181 -89.000 -43.152 52.722 1.00 31.95 N
ATOM 15 C2 U B 181 -90.204 -43.734 53.077 1.00 31.95 C
ATOM 16 O2 U B 181 -90.939 -43.269 53.929 1.00 31.95 O
ATOM 17 N3 U B 181 -90.515 -44.884 52.403 1.00 31.95 N
ATOM 18 C4 U B 181 -89.774 -45.501 51.427 1.00 31.95 C
ATOM 19 O4 U B 181 -90.236 -46.498 50.870 1.00 31.95 O
ATOM 20 C5 U B 181 -88.543 -44.840 51.101 1.00 31.95 C
ATOM 21 C6 U B 181 -88.209 -43.711 51.740 1.00 31.95 C
ATOM 22 P C B 182 -84.172 -42.526 55.492 1.00 20.67 P
ATOM 23 OP1 C B 182 -83.657 -42.204 56.850 1.00 26.35 O
ATOM 24 OP2 C B 182 -83.249 -42.477 54.331 1.00 26.35 O
ATOM 25 O5' C B 182 -84.828 -43.977 55.570 1.00 25.39 O
TER

Atoms:
OP1: (-83.404,-44.412,44.559)
OP2: (-85.218,-45.799,45.751)
C3': (-85.863,-41.786,47.944)
C1': (-87.557,-40.457,46.956)
C5': (-84.752,-42.119,45.629)
O4': (-86.479,-40.440,46.057)
C8: (-89.894,-41.150,46.161)
O2': (-88.019,-41.520,49.042)
C6: (-90.933,-38.512,44.094)
C5: (-90.383,-39.488,44.934)
C4: (-89.102,-39.273,45.379)
P: (-84.834,-44.638,44.897)
C4': (-85.368,-41.177,46.636)
C2': (-87.382,-41.714,47.803)
C2: (-88.945,-37.385,44.275)
N1: (-90.167,-37.454,43.777)
N3: (-88.318,-38.229,45.080)
N6: (-92.168,-38.568,43.593)
N7: (-90.876,-40.685,45.425)
N9: (-88.800,-40.331,46.198)
O5': (-85.449,-43.367,45.625)
O3': (-85.430,-40.968,49.018)
C4: (-89.774,-45.501,51.427)
N3: (-90.515,-44.884,52.403)
OP1: (-83.346,-40.465,50.290)
OP2: (-83.897,-42.888,49.671)
C2: (-90.204,-43.734,53.077)
C1': (-88.600,-41.941,53.457)
C3': (-86.324,-41.934,54.146)
O5': (-85.221,-41.666,51.414)
O4': (-87.874,-41.074,52.607)
C5': (-85.559,-40.482,52.163)
P: (-84.359,-41.539,50.075)
C4': (-86.597,-40.772,53.216)
C2': (-87.716,-42.268,54.664)
O2': (-88.140,-41.479,55.750)
N1: (-89.000,-43.152,52.722)
O4: (-90.236,-46.498,50.870)
O2: (-90.939,-43.269,53.929)
C6: (-88.209,-43.711,51.740)
C5: (-88.543,-44.840,51.101)
O3': (-85.431,-41.582,55.184)
Image (generated by PyMOL):
PyMOL image
show in jmol