Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y39:C41:C21
Extra
PDB:
ATOM 1 O3' G A 40 107.596 109.981 9.638 1.00 80.01 O
ATOM 2 P C A 41 108.980 109.211 9.888 1.00 82.80 P
ATOM 3 OP1 C A 41 109.997 109.775 8.960 1.00 82.20 O
ATOM 4 OP2 C A 41 108.687 107.750 9.869 1.00 82.17 O
ATOM 5 O5' C A 41 109.347 109.579 11.396 1.00 81.19 O
ATOM 6 C5' C A 41 109.384 110.931 11.816 1.00 78.58 C
ATOM 7 C4' C A 41 109.260 111.017 13.312 1.00 76.93 C
ATOM 8 O4' C A 41 107.988 110.466 13.739 1.00 75.94 O
ATOM 9 C3' C A 41 110.233 110.185 14.119 1.00 76.88 C
ATOM 10 O3' C A 41 111.543 110.741 14.138 1.00 78.02 O
ATOM 11 C2' C A 41 109.562 110.191 15.488 1.00 76.12 C
ATOM 12 O2' C A 41 109.722 111.381 16.229 1.00 76.60 O
ATOM 13 C1' C A 41 108.095 110.051 15.094 1.00 74.68 C
ATOM 14 N1 C A 41 107.719 108.643 15.211 1.00 73.22 N
ATOM 15 C2 C A 41 107.494 108.134 16.491 1.00 72.08 C
ATOM 16 O2 C A 41 107.560 108.914 17.460 1.00 70.96 O
ATOM 17 N3 C A 41 107.216 106.816 16.641 1.00 70.35 N
ATOM 18 C4 C A 41 107.157 106.023 15.570 1.00 69.85 C
ATOM 19 N4 C A 41 106.924 104.730 15.765 1.00 68.64 N
ATOM 20 C5 C A 41 107.348 106.523 14.249 1.00 70.71 C
ATOM 21 C6 C A 41 107.620 107.830 14.115 1.00 72.43 C
ATOM 22 P G A 42 112.815 109.757 14.199 1.00 77.59 P
ATOM 23 OP1 G A 42 114.051 110.565 14.342 1.00 77.72 O
ATOM 24 OP2 G A 42 112.684 108.803 13.061 1.00 77.24 O
ATOM 25 O5' G A 42 112.585 108.960 15.559 1.00 75.79 O
TER
ATOM 1 O3' G B 20 105.436 95.782 11.531 1.00 62.78 O
ATOM 2 P C B 21 107.047 95.738 11.521 1.00 63.34 P
ATOM 3 OP1 C B 21 107.448 94.855 10.387 1.00 61.61 O
ATOM 4 OP2 C B 21 107.533 95.421 12.882 1.00 64.82 O
ATOM 5 O5' C B 21 107.457 97.250 11.215 1.00 61.60 O
ATOM 6 C5' C B 21 107.305 97.785 9.907 1.00 62.27 C
ATOM 7 C4' C B 21 107.551 99.277 9.897 1.00 63.17 C
ATOM 8 O4' C B 21 106.537 99.962 10.669 1.00 62.59 O
ATOM 9 C3' C B 21 108.845 99.772 10.508 1.00 64.79 C
ATOM 10 O3' C B 21 109.915 99.619 9.586 1.00 67.75 O
ATOM 11 C2' C B 21 108.533 101.245 10.748 1.00 63.53 C
ATOM 12 O2' C B 21 108.654 102.031 9.582 1.00 65.58 O
ATOM 13 C1' C B 21 107.060 101.189 11.148 1.00 61.22 C
ATOM 14 N1 C B 21 106.872 101.239 12.598 1.00 59.22 N
ATOM 15 C2 C B 21 106.930 102.470 13.233 1.00 58.47 C
ATOM 16 O2 C B 21 107.111 103.491 12.549 1.00 57.33 O
ATOM 17 N3 C B 21 106.786 102.525 14.575 1.00 58.53 N
ATOM 18 C4 C B 21 106.583 101.404 15.272 1.00 58.95 C
ATOM 19 N4 C B 21 106.465 101.501 16.595 1.00 60.27 N
ATOM 20 C5 C B 21 106.500 100.136 14.644 1.00 58.98 C
ATOM 21 C6 C B 21 106.651 100.098 13.317 1.00 59.76 C
ATOM 22 P A B 22 111.225 98.810 10.029 1.00 69.30 P
ATOM 23 OP1 A B 22 110.849 97.379 10.186 1.00 68.34 O
ATOM 24 OP2 A B 22 111.812 99.556 11.183 1.00 69.01 O
ATOM 25 O5' A B 22 112.193 98.923 8.767 1.00 69.19 O
TER
ATOM 2 P C A 41 108.980 109.211 9.888 1.00 82.80 P
ATOM 3 OP1 C A 41 109.997 109.775 8.960 1.00 82.20 O
ATOM 4 OP2 C A 41 108.687 107.750 9.869 1.00 82.17 O
ATOM 5 O5' C A 41 109.347 109.579 11.396 1.00 81.19 O
ATOM 6 C5' C A 41 109.384 110.931 11.816 1.00 78.58 C
ATOM 7 C4' C A 41 109.260 111.017 13.312 1.00 76.93 C
ATOM 8 O4' C A 41 107.988 110.466 13.739 1.00 75.94 O
ATOM 9 C3' C A 41 110.233 110.185 14.119 1.00 76.88 C
ATOM 10 O3' C A 41 111.543 110.741 14.138 1.00 78.02 O
ATOM 11 C2' C A 41 109.562 110.191 15.488 1.00 76.12 C
ATOM 12 O2' C A 41 109.722 111.381 16.229 1.00 76.60 O
ATOM 13 C1' C A 41 108.095 110.051 15.094 1.00 74.68 C
ATOM 14 N1 C A 41 107.719 108.643 15.211 1.00 73.22 N
ATOM 15 C2 C A 41 107.494 108.134 16.491 1.00 72.08 C
ATOM 16 O2 C A 41 107.560 108.914 17.460 1.00 70.96 O
ATOM 17 N3 C A 41 107.216 106.816 16.641 1.00 70.35 N
ATOM 18 C4 C A 41 107.157 106.023 15.570 1.00 69.85 C
ATOM 19 N4 C A 41 106.924 104.730 15.765 1.00 68.64 N
ATOM 20 C5 C A 41 107.348 106.523 14.249 1.00 70.71 C
ATOM 21 C6 C A 41 107.620 107.830 14.115 1.00 72.43 C
ATOM 22 P G A 42 112.815 109.757 14.199 1.00 77.59 P
ATOM 23 OP1 G A 42 114.051 110.565 14.342 1.00 77.72 O
ATOM 24 OP2 G A 42 112.684 108.803 13.061 1.00 77.24 O
ATOM 25 O5' G A 42 112.585 108.960 15.559 1.00 75.79 O
TER
ATOM 1 O3' G B 20 105.436 95.782 11.531 1.00 62.78 O
ATOM 2 P C B 21 107.047 95.738 11.521 1.00 63.34 P
ATOM 3 OP1 C B 21 107.448 94.855 10.387 1.00 61.61 O
ATOM 4 OP2 C B 21 107.533 95.421 12.882 1.00 64.82 O
ATOM 5 O5' C B 21 107.457 97.250 11.215 1.00 61.60 O
ATOM 6 C5' C B 21 107.305 97.785 9.907 1.00 62.27 C
ATOM 7 C4' C B 21 107.551 99.277 9.897 1.00 63.17 C
ATOM 8 O4' C B 21 106.537 99.962 10.669 1.00 62.59 O
ATOM 9 C3' C B 21 108.845 99.772 10.508 1.00 64.79 C
ATOM 10 O3' C B 21 109.915 99.619 9.586 1.00 67.75 O
ATOM 11 C2' C B 21 108.533 101.245 10.748 1.00 63.53 C
ATOM 12 O2' C B 21 108.654 102.031 9.582 1.00 65.58 O
ATOM 13 C1' C B 21 107.060 101.189 11.148 1.00 61.22 C
ATOM 14 N1 C B 21 106.872 101.239 12.598 1.00 59.22 N
ATOM 15 C2 C B 21 106.930 102.470 13.233 1.00 58.47 C
ATOM 16 O2 C B 21 107.111 103.491 12.549 1.00 57.33 O
ATOM 17 N3 C B 21 106.786 102.525 14.575 1.00 58.53 N
ATOM 18 C4 C B 21 106.583 101.404 15.272 1.00 58.95 C
ATOM 19 N4 C B 21 106.465 101.501 16.595 1.00 60.27 N
ATOM 20 C5 C B 21 106.500 100.136 14.644 1.00 58.98 C
ATOM 21 C6 C B 21 106.651 100.098 13.317 1.00 59.76 C
ATOM 22 P A B 22 111.225 98.810 10.029 1.00 69.30 P
ATOM 23 OP1 A B 22 110.849 97.379 10.186 1.00 68.34 O
ATOM 24 OP2 A B 22 111.812 99.556 11.183 1.00 69.01 O
ATOM 25 O5' A B 22 112.193 98.923 8.767 1.00 69.19 O
TER
Atoms:
C2: (107.494,108.134,16.491)
OP1: (109.997,109.775,8.960)
OP2: (108.687,107.750,9.869)
C4: (107.157,106.023,15.570)
O5': (109.347,109.579,11.396)
C3': (110.233,110.185,14.119)
C1': (108.095,110.051,15.094)
O4': (107.988,110.466,13.739)
C5': (109.384,110.931,11.816)
P: (108.980,109.211,9.888)
O2: (107.560,108.914,17.460)
C4': (109.260,111.017,13.312)
C2': (109.562,110.191,15.488)
O2': (109.722,111.381,16.229)
N1: (107.719,108.643,15.211)
N3: (107.216,106.816,16.641)
N4: (106.924,104.730,15.765)
C6: (107.620,107.830,14.115)
C5: (107.348,106.523,14.249)
O3': (111.543,110.741,14.138)
OP1: (109.997,109.775,8.960)
OP2: (108.687,107.750,9.869)
C4: (107.157,106.023,15.570)
O5': (109.347,109.579,11.396)
C3': (110.233,110.185,14.119)
C1': (108.095,110.051,15.094)
O4': (107.988,110.466,13.739)
C5': (109.384,110.931,11.816)
P: (108.980,109.211,9.888)
O2: (107.560,108.914,17.460)
C4': (109.260,111.017,13.312)
C2': (109.562,110.191,15.488)
O2': (109.722,111.381,16.229)
N1: (107.719,108.643,15.211)
N3: (107.216,106.816,16.641)
N4: (106.924,104.730,15.765)
C6: (107.620,107.830,14.115)
C5: (107.348,106.523,14.249)
O3': (111.543,110.741,14.138)
C2: (106.930,102.470,13.233)
OP1: (107.448,94.855,10.387)
OP2: (107.533,95.421,12.882)
C4: (106.583,101.404,15.272)
O5': (107.457,97.250,11.215)
C3': (108.845,99.772,10.508)
C1': (107.060,101.189,11.148)
O4': (106.537,99.962,10.669)
C5': (107.305,97.785,9.907)
P: (107.047,95.738,11.521)
O2: (107.111,103.491,12.549)
C4': (107.551,99.277,9.897)
C2': (108.533,101.245,10.748)
O2': (108.654,102.031,9.582)
N1: (106.872,101.239,12.598)
N3: (106.786,102.525,14.575)
N4: (106.465,101.501,16.595)
C6: (106.651,100.098,13.317)
C5: (106.500,100.136,14.644)
O3': (109.915,99.619,9.586)
OP1: (107.448,94.855,10.387)
OP2: (107.533,95.421,12.882)
C4: (106.583,101.404,15.272)
O5': (107.457,97.250,11.215)
C3': (108.845,99.772,10.508)
C1': (107.060,101.189,11.148)
O4': (106.537,99.962,10.669)
C5': (107.305,97.785,9.907)
P: (107.047,95.738,11.521)
O2: (107.111,103.491,12.549)
C4': (107.551,99.277,9.897)
C2': (108.533,101.245,10.748)
O2': (108.654,102.031,9.582)
N1: (106.872,101.239,12.598)
N3: (106.786,102.525,14.575)
N4: (106.465,101.501,16.595)
C6: (106.651,100.098,13.317)
C5: (106.500,100.136,14.644)
O3': (109.915,99.619,9.586)
Image (generated by PyMOL):