Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01901:01898
Extra
PDB:
ATOM 1 O3' A A1900 110.601 116.057 82.442 1.00 53.88 O
ATOM 2 P C A1901 109.756 115.830 83.794 1.00 52.59 P
ATOM 3 OP1 C A1901 108.877 117.014 83.948 1.00 53.49 O
ATOM 4 OP2 C A1901 110.672 115.451 84.891 1.00 53.08 O
ATOM 5 O5' C A1901 108.826 114.585 83.465 1.00 53.47 O
ATOM 6 C5' C A1901 107.764 114.703 82.499 1.00 57.74 C
ATOM 7 C4' C A1901 106.901 113.467 82.509 1.00 59.10 C
ATOM 8 O4' C A1901 107.617 112.339 81.951 1.00 60.23 O
ATOM 9 C3' C A1901 106.490 113.008 83.890 1.00 59.95 C
ATOM 10 O3' C A1901 105.357 113.734 84.315 1.00 59.78 O
ATOM 11 C2' C A1901 106.178 111.540 83.667 1.00 60.43 C
ATOM 12 O2' C A1901 104.902 111.387 83.086 1.00 62.24 O
ATOM 13 C1' C A1901 107.246 111.159 82.637 1.00 61.44 C
ATOM 14 N1 C A1901 108.461 110.543 83.202 1.00 62.85 N
ATOM 15 C2 C A1901 108.502 109.151 83.363 1.00 65.17 C
ATOM 16 O2 C A1901 107.519 108.471 83.018 1.00 66.67 O
ATOM 17 N3 C A1901 109.610 108.578 83.888 1.00 64.67 N
ATOM 18 C4 C A1901 110.643 109.335 84.250 1.00 63.77 C
ATOM 19 N4 C A1901 111.699 108.728 84.788 1.00 64.36 N
ATOM 20 C5 C A1901 110.634 110.748 84.085 1.00 63.58 C
ATOM 21 C6 C A1901 109.534 111.306 83.565 1.00 62.52 C
ATOM 22 P G A1902 105.120 113.977 85.874 1.00 61.15 P
ATOM 23 OP1 G A1902 103.730 114.469 86.035 1.00 63.43 O
ATOM 24 OP2 G A1902 106.250 114.776 86.408 1.00 59.80 O
ATOM 25 O5' G A1902 105.180 112.510 86.469 1.00 58.45 O
TER
ATOM 1 O3' U B1897 120.758 112.254 81.474 1.00 56.05 O
ATOM 2 P C B1898 120.394 112.228 83.026 1.00 55.30 P
ATOM 3 OP1 C B1898 120.946 113.465 83.638 1.00 56.62 O
ATOM 4 OP2 C B1898 120.780 110.897 83.566 1.00 54.91 O
ATOM 5 O5' C B1898 118.808 112.313 83.045 1.00 57.06 O
ATOM 6 C5' C B1898 118.107 113.466 82.546 1.00 57.56 C
ATOM 7 C4' C B1898 116.913 113.750 83.423 1.00 57.57 C
ATOM 8 O4' C B1898 116.128 112.536 83.543 1.00 58.24 O
ATOM 9 C3' C B1898 117.267 114.134 84.850 1.00 57.56 C
ATOM 10 O3' C B1898 117.454 115.550 84.917 1.00 56.59 O
ATOM 11 C2' C B1898 116.051 113.659 85.643 1.00 58.27 C
ATOM 12 O2' C B1898 114.984 114.580 85.627 1.00 58.74 O
ATOM 13 C1' C B1898 115.634 112.409 84.860 1.00 58.95 C
ATOM 14 N1 C B1898 116.092 111.114 85.395 1.00 61.14 N
ATOM 15 C2 C B1898 115.183 110.054 85.460 1.00 63.03 C
ATOM 16 O2 C B1898 114.020 110.233 85.073 1.00 63.74 O
ATOM 17 N3 C B1898 115.595 108.860 85.942 1.00 64.03 N
ATOM 18 C4 C B1898 116.856 108.702 86.345 1.00 62.79 C
ATOM 19 N4 C B1898 117.220 107.507 86.806 1.00 62.97 N
ATOM 20 C5 C B1898 117.800 109.761 86.291 1.00 62.45 C
ATOM 21 C6 C B1898 117.381 110.938 85.814 1.00 62.71 C
ATOM 22 P A B1899 118.315 116.201 86.107 1.00 55.35 P
ATOM 23 OP1 A B1899 119.707 116.339 85.613 1.00 58.15 O
ATOM 24 OP2 A B1899 118.056 115.479 87.377 1.00 55.81 O
ATOM 25 O5' A B1899 117.687 117.651 86.251 1.00 55.08 O
TER
ATOM 2 P C A1901 109.756 115.830 83.794 1.00 52.59 P
ATOM 3 OP1 C A1901 108.877 117.014 83.948 1.00 53.49 O
ATOM 4 OP2 C A1901 110.672 115.451 84.891 1.00 53.08 O
ATOM 5 O5' C A1901 108.826 114.585 83.465 1.00 53.47 O
ATOM 6 C5' C A1901 107.764 114.703 82.499 1.00 57.74 C
ATOM 7 C4' C A1901 106.901 113.467 82.509 1.00 59.10 C
ATOM 8 O4' C A1901 107.617 112.339 81.951 1.00 60.23 O
ATOM 9 C3' C A1901 106.490 113.008 83.890 1.00 59.95 C
ATOM 10 O3' C A1901 105.357 113.734 84.315 1.00 59.78 O
ATOM 11 C2' C A1901 106.178 111.540 83.667 1.00 60.43 C
ATOM 12 O2' C A1901 104.902 111.387 83.086 1.00 62.24 O
ATOM 13 C1' C A1901 107.246 111.159 82.637 1.00 61.44 C
ATOM 14 N1 C A1901 108.461 110.543 83.202 1.00 62.85 N
ATOM 15 C2 C A1901 108.502 109.151 83.363 1.00 65.17 C
ATOM 16 O2 C A1901 107.519 108.471 83.018 1.00 66.67 O
ATOM 17 N3 C A1901 109.610 108.578 83.888 1.00 64.67 N
ATOM 18 C4 C A1901 110.643 109.335 84.250 1.00 63.77 C
ATOM 19 N4 C A1901 111.699 108.728 84.788 1.00 64.36 N
ATOM 20 C5 C A1901 110.634 110.748 84.085 1.00 63.58 C
ATOM 21 C6 C A1901 109.534 111.306 83.565 1.00 62.52 C
ATOM 22 P G A1902 105.120 113.977 85.874 1.00 61.15 P
ATOM 23 OP1 G A1902 103.730 114.469 86.035 1.00 63.43 O
ATOM 24 OP2 G A1902 106.250 114.776 86.408 1.00 59.80 O
ATOM 25 O5' G A1902 105.180 112.510 86.469 1.00 58.45 O
TER
ATOM 1 O3' U B1897 120.758 112.254 81.474 1.00 56.05 O
ATOM 2 P C B1898 120.394 112.228 83.026 1.00 55.30 P
ATOM 3 OP1 C B1898 120.946 113.465 83.638 1.00 56.62 O
ATOM 4 OP2 C B1898 120.780 110.897 83.566 1.00 54.91 O
ATOM 5 O5' C B1898 118.808 112.313 83.045 1.00 57.06 O
ATOM 6 C5' C B1898 118.107 113.466 82.546 1.00 57.56 C
ATOM 7 C4' C B1898 116.913 113.750 83.423 1.00 57.57 C
ATOM 8 O4' C B1898 116.128 112.536 83.543 1.00 58.24 O
ATOM 9 C3' C B1898 117.267 114.134 84.850 1.00 57.56 C
ATOM 10 O3' C B1898 117.454 115.550 84.917 1.00 56.59 O
ATOM 11 C2' C B1898 116.051 113.659 85.643 1.00 58.27 C
ATOM 12 O2' C B1898 114.984 114.580 85.627 1.00 58.74 O
ATOM 13 C1' C B1898 115.634 112.409 84.860 1.00 58.95 C
ATOM 14 N1 C B1898 116.092 111.114 85.395 1.00 61.14 N
ATOM 15 C2 C B1898 115.183 110.054 85.460 1.00 63.03 C
ATOM 16 O2 C B1898 114.020 110.233 85.073 1.00 63.74 O
ATOM 17 N3 C B1898 115.595 108.860 85.942 1.00 64.03 N
ATOM 18 C4 C B1898 116.856 108.702 86.345 1.00 62.79 C
ATOM 19 N4 C B1898 117.220 107.507 86.806 1.00 62.97 N
ATOM 20 C5 C B1898 117.800 109.761 86.291 1.00 62.45 C
ATOM 21 C6 C B1898 117.381 110.938 85.814 1.00 62.71 C
ATOM 22 P A B1899 118.315 116.201 86.107 1.00 55.35 P
ATOM 23 OP1 A B1899 119.707 116.339 85.613 1.00 58.15 O
ATOM 24 OP2 A B1899 118.056 115.479 87.377 1.00 55.81 O
ATOM 25 O5' A B1899 117.687 117.651 86.251 1.00 55.08 O
TER
Atoms:
C2: (108.502,109.151,83.363)
OP1: (108.877,117.014,83.948)
OP2: (110.672,115.451,84.891)
C4: (110.643,109.335,84.250)
O5': (108.826,114.585,83.465)
C3': (106.490,113.008,83.890)
C1': (107.246,111.159,82.637)
O4': (107.617,112.339,81.951)
C5': (107.764,114.703,82.499)
P: (109.756,115.830,83.794)
O2: (107.519,108.471,83.018)
C4': (106.901,113.467,82.509)
C2': (106.178,111.540,83.667)
O2': (104.902,111.387,83.086)
N1: (108.461,110.543,83.202)
N3: (109.610,108.578,83.888)
N4: (111.699,108.728,84.788)
C6: (109.534,111.306,83.565)
C5: (110.634,110.748,84.085)
O3': (105.357,113.734,84.315)
OP1: (108.877,117.014,83.948)
OP2: (110.672,115.451,84.891)
C4: (110.643,109.335,84.250)
O5': (108.826,114.585,83.465)
C3': (106.490,113.008,83.890)
C1': (107.246,111.159,82.637)
O4': (107.617,112.339,81.951)
C5': (107.764,114.703,82.499)
P: (109.756,115.830,83.794)
O2: (107.519,108.471,83.018)
C4': (106.901,113.467,82.509)
C2': (106.178,111.540,83.667)
O2': (104.902,111.387,83.086)
N1: (108.461,110.543,83.202)
N3: (109.610,108.578,83.888)
N4: (111.699,108.728,84.788)
C6: (109.534,111.306,83.565)
C5: (110.634,110.748,84.085)
O3': (105.357,113.734,84.315)
C2: (115.183,110.054,85.460)
OP1: (120.946,113.465,83.638)
OP2: (120.780,110.897,83.566)
C4: (116.856,108.702,86.345)
O5': (118.808,112.313,83.045)
C3': (117.267,114.134,84.850)
C1': (115.634,112.409,84.860)
O4': (116.128,112.536,83.543)
C5': (118.107,113.466,82.546)
P: (120.394,112.228,83.026)
O2: (114.020,110.233,85.073)
C4': (116.913,113.750,83.423)
C2': (116.051,113.659,85.643)
O2': (114.984,114.580,85.627)
N1: (116.092,111.114,85.395)
N3: (115.595,108.860,85.942)
N4: (117.220,107.507,86.806)
C6: (117.381,110.938,85.814)
C5: (117.800,109.761,86.291)
O3': (117.454,115.550,84.917)
OP1: (120.946,113.465,83.638)
OP2: (120.780,110.897,83.566)
C4: (116.856,108.702,86.345)
O5': (118.808,112.313,83.045)
C3': (117.267,114.134,84.850)
C1': (115.634,112.409,84.860)
O4': (116.128,112.536,83.543)
C5': (118.107,113.466,82.546)
P: (120.394,112.228,83.026)
O2: (114.020,110.233,85.073)
C4': (116.913,113.750,83.423)
C2': (116.051,113.659,85.643)
O2': (114.984,114.580,85.627)
N1: (116.092,111.114,85.395)
N3: (115.595,108.860,85.942)
N4: (117.220,107.507,86.806)
C6: (117.381,110.938,85.814)
C5: (117.800,109.761,86.291)
O3': (117.454,115.550,84.917)
Image (generated by PyMOL):