Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12309:12310
Extra
PDB:
ATOM 1 O3' C A2308 -0.365 11.549 158.840 1.00 81.15 O
ATOM 2 P A A2309 0.633 10.394 158.339 1.00 80.97 P
ATOM 3 OP1 A A2309 1.993 10.758 158.842 1.00 81.14 O
ATOM 4 OP2 A A2309 0.428 10.229 156.865 1.00 80.14 O
ATOM 5 O5' A A2309 0.099 9.109 159.107 1.00 81.26 O
ATOM 6 C5' A A2309 0.313 8.969 160.503 1.00 82.01 C
ATOM 7 C4' A A2309 -0.035 7.598 160.978 1.00 82.11 C
ATOM 8 O4' A A2309 -1.342 7.243 160.471 1.00 81.94 O
ATOM 9 C3' A A2309 0.916 6.504 160.531 1.00 81.58 C
ATOM 10 O3' A A2309 1.014 5.539 161.550 1.00 82.02 O
ATOM 11 C2' A A2309 0.209 5.889 159.335 1.00 80.89 C
ATOM 12 O2' A A2309 0.535 4.531 159.098 1.00 80.54 O
ATOM 13 C1' A A2309 -1.265 6.058 159.707 1.00 81.33 C
ATOM 14 N9 A A2309 -2.139 6.215 158.544 1.00 80.81 N
ATOM 15 C8 A A2309 -2.119 7.274 157.675 1.00 80.48 C
ATOM 16 N7 A A2309 -2.981 7.178 156.695 1.00 80.05 N
ATOM 17 C5 A A2309 -3.611 5.971 156.941 1.00 80.10 C
ATOM 18 C6 A A2309 -4.624 5.301 156.243 1.00 79.78 C
ATOM 19 N6 A A2309 -5.184 5.792 155.134 1.00 79.33 N
ATOM 20 N1 A A2309 -5.028 4.105 156.732 1.00 79.95 N
ATOM 21 C2 A A2309 -4.444 3.632 157.844 1.00 80.41 C
ATOM 22 N3 A A2309 -3.474 4.178 158.588 1.00 80.75 N
ATOM 23 C4 A A2309 -3.100 5.362 158.076 1.00 80.57 C
ATOM 24 P U A2310 2.036 5.753 162.746 1.00 85.12 P
ATOM 25 OP1 U A2310 1.827 4.629 163.692 1.00 85.56 O
ATOM 26 OP2 U A2310 1.866 7.133 163.234 1.00 85.63 O
ATOM 27 O5' U A2310 3.444 5.620 162.026 1.00 84.52 O
TER
ATOM 1 O3' A B2309 1.014 5.539 161.550 1.00 82.02 O
ATOM 2 P U B2310 2.036 5.753 162.746 1.00 85.12 P
ATOM 3 OP1 U B2310 1.827 4.629 163.692 1.00 85.56 O
ATOM 4 OP2 U B2310 1.866 7.133 163.234 1.00 85.63 O
ATOM 5 O5' U B2310 3.444 5.620 162.026 1.00 84.52 O
ATOM 6 C5' U B2310 3.926 4.371 161.583 1.00 84.04 C
ATOM 7 C4' U B2310 5.398 4.446 161.351 1.00 83.76 C
ATOM 8 O4' U B2310 5.656 5.476 160.392 1.00 83.31 O
ATOM 9 C3' U B2310 6.211 4.822 162.570 1.00 84.44 C
ATOM 10 O3' U B2310 6.640 3.684 163.284 1.00 84.68 O
ATOM 11 C2' U B2310 7.362 5.687 162.040 1.00 84.13 C
ATOM 12 O2' U B2310 8.557 4.925 161.892 1.00 83.83 O
ATOM 13 C1' U B2310 6.871 6.111 160.657 1.00 83.43 C
ATOM 14 N1 U B2310 6.667 7.554 160.533 1.00 83.58 N
ATOM 15 C2 U B2310 7.751 8.263 160.066 1.00 83.31 C
ATOM 16 O2 U B2310 8.821 7.712 159.827 1.00 82.99 O
ATOM 17 N3 U B2310 7.516 9.612 159.908 1.00 83.45 N
ATOM 18 C4 U B2310 6.330 10.269 160.149 1.00 83.82 C
ATOM 19 O4 U B2310 6.270 11.472 159.948 1.00 83.91 O
ATOM 20 C5 U B2310 5.254 9.445 160.613 1.00 84.06 C
ATOM 21 C6 U B2310 5.443 8.131 160.776 1.00 83.93 C
ATOM 22 P U B2311 6.657 3.698 164.888 1.00 99.30 P
ATOM 23 OP1 U B2311 6.550 2.285 165.327 1.00 99.40 O
ATOM 24 OP2 U B2311 5.620 4.682 165.347 1.00 99.80 O
ATOM 25 O5' U B2311 8.107 4.257 165.209 1.00 99.43 O
TER
ATOM 2 P A A2309 0.633 10.394 158.339 1.00 80.97 P
ATOM 3 OP1 A A2309 1.993 10.758 158.842 1.00 81.14 O
ATOM 4 OP2 A A2309 0.428 10.229 156.865 1.00 80.14 O
ATOM 5 O5' A A2309 0.099 9.109 159.107 1.00 81.26 O
ATOM 6 C5' A A2309 0.313 8.969 160.503 1.00 82.01 C
ATOM 7 C4' A A2309 -0.035 7.598 160.978 1.00 82.11 C
ATOM 8 O4' A A2309 -1.342 7.243 160.471 1.00 81.94 O
ATOM 9 C3' A A2309 0.916 6.504 160.531 1.00 81.58 C
ATOM 10 O3' A A2309 1.014 5.539 161.550 1.00 82.02 O
ATOM 11 C2' A A2309 0.209 5.889 159.335 1.00 80.89 C
ATOM 12 O2' A A2309 0.535 4.531 159.098 1.00 80.54 O
ATOM 13 C1' A A2309 -1.265 6.058 159.707 1.00 81.33 C
ATOM 14 N9 A A2309 -2.139 6.215 158.544 1.00 80.81 N
ATOM 15 C8 A A2309 -2.119 7.274 157.675 1.00 80.48 C
ATOM 16 N7 A A2309 -2.981 7.178 156.695 1.00 80.05 N
ATOM 17 C5 A A2309 -3.611 5.971 156.941 1.00 80.10 C
ATOM 18 C6 A A2309 -4.624 5.301 156.243 1.00 79.78 C
ATOM 19 N6 A A2309 -5.184 5.792 155.134 1.00 79.33 N
ATOM 20 N1 A A2309 -5.028 4.105 156.732 1.00 79.95 N
ATOM 21 C2 A A2309 -4.444 3.632 157.844 1.00 80.41 C
ATOM 22 N3 A A2309 -3.474 4.178 158.588 1.00 80.75 N
ATOM 23 C4 A A2309 -3.100 5.362 158.076 1.00 80.57 C
ATOM 24 P U A2310 2.036 5.753 162.746 1.00 85.12 P
ATOM 25 OP1 U A2310 1.827 4.629 163.692 1.00 85.56 O
ATOM 26 OP2 U A2310 1.866 7.133 163.234 1.00 85.63 O
ATOM 27 O5' U A2310 3.444 5.620 162.026 1.00 84.52 O
TER
ATOM 1 O3' A B2309 1.014 5.539 161.550 1.00 82.02 O
ATOM 2 P U B2310 2.036 5.753 162.746 1.00 85.12 P
ATOM 3 OP1 U B2310 1.827 4.629 163.692 1.00 85.56 O
ATOM 4 OP2 U B2310 1.866 7.133 163.234 1.00 85.63 O
ATOM 5 O5' U B2310 3.444 5.620 162.026 1.00 84.52 O
ATOM 6 C5' U B2310 3.926 4.371 161.583 1.00 84.04 C
ATOM 7 C4' U B2310 5.398 4.446 161.351 1.00 83.76 C
ATOM 8 O4' U B2310 5.656 5.476 160.392 1.00 83.31 O
ATOM 9 C3' U B2310 6.211 4.822 162.570 1.00 84.44 C
ATOM 10 O3' U B2310 6.640 3.684 163.284 1.00 84.68 O
ATOM 11 C2' U B2310 7.362 5.687 162.040 1.00 84.13 C
ATOM 12 O2' U B2310 8.557 4.925 161.892 1.00 83.83 O
ATOM 13 C1' U B2310 6.871 6.111 160.657 1.00 83.43 C
ATOM 14 N1 U B2310 6.667 7.554 160.533 1.00 83.58 N
ATOM 15 C2 U B2310 7.751 8.263 160.066 1.00 83.31 C
ATOM 16 O2 U B2310 8.821 7.712 159.827 1.00 82.99 O
ATOM 17 N3 U B2310 7.516 9.612 159.908 1.00 83.45 N
ATOM 18 C4 U B2310 6.330 10.269 160.149 1.00 83.82 C
ATOM 19 O4 U B2310 6.270 11.472 159.948 1.00 83.91 O
ATOM 20 C5 U B2310 5.254 9.445 160.613 1.00 84.06 C
ATOM 21 C6 U B2310 5.443 8.131 160.776 1.00 83.93 C
ATOM 22 P U B2311 6.657 3.698 164.888 1.00 99.30 P
ATOM 23 OP1 U B2311 6.550 2.285 165.327 1.00 99.40 O
ATOM 24 OP2 U B2311 5.620 4.682 165.347 1.00 99.80 O
ATOM 25 O5' U B2311 8.107 4.257 165.209 1.00 99.43 O
TER
Atoms:
OP1: (1.993,10.758,158.842)
OP2: (0.428,10.229,156.865)
C3': (0.916,6.504,160.531)
C1': (-1.265,6.058,159.707)
C5': (0.313,8.969,160.503)
O4': (-1.342,7.243,160.471)
C8: (-2.119,7.274,157.675)
O2': (0.535,4.531,159.098)
C6: (-4.624,5.301,156.243)
C5: (-3.611,5.971,156.941)
C4: (-3.100,5.362,158.076)
P: (0.633,10.394,158.339)
C4': (-0.035,7.598,160.978)
C2': (0.209,5.889,159.335)
C2: (-4.444,3.632,157.844)
N1: (-5.028,4.105,156.732)
N3: (-3.474,4.178,158.588)
N6: (-5.184,5.792,155.134)
N7: (-2.981,7.178,156.695)
N9: (-2.139,6.215,158.544)
O5': (0.099,9.109,159.107)
O3': (1.014,5.539,161.550)
OP2: (0.428,10.229,156.865)
C3': (0.916,6.504,160.531)
C1': (-1.265,6.058,159.707)
C5': (0.313,8.969,160.503)
O4': (-1.342,7.243,160.471)
C8: (-2.119,7.274,157.675)
O2': (0.535,4.531,159.098)
C6: (-4.624,5.301,156.243)
C5: (-3.611,5.971,156.941)
C4: (-3.100,5.362,158.076)
P: (0.633,10.394,158.339)
C4': (-0.035,7.598,160.978)
C2': (0.209,5.889,159.335)
C2: (-4.444,3.632,157.844)
N1: (-5.028,4.105,156.732)
N3: (-3.474,4.178,158.588)
N6: (-5.184,5.792,155.134)
N7: (-2.981,7.178,156.695)
N9: (-2.139,6.215,158.544)
O5': (0.099,9.109,159.107)
O3': (1.014,5.539,161.550)
C4: (6.330,10.269,160.149)
N3: (7.516,9.612,159.908)
OP1: (1.827,4.629,163.692)
OP2: (1.866,7.133,163.234)
C2: (7.751,8.263,160.066)
C1': (6.871,6.111,160.657)
C3': (6.211,4.822,162.570)
O5': (3.444,5.620,162.026)
O4': (5.656,5.476,160.392)
C5': (3.926,4.371,161.583)
P: (2.036,5.753,162.746)
C4': (5.398,4.446,161.351)
C2': (7.362,5.687,162.040)
O2': (8.557,4.925,161.892)
N1: (6.667,7.554,160.533)
O4: (6.270,11.472,159.948)
O2: (8.821,7.712,159.827)
C6: (5.443,8.131,160.776)
C5: (5.254,9.445,160.613)
O3': (6.640,3.684,163.284)
N3: (7.516,9.612,159.908)
OP1: (1.827,4.629,163.692)
OP2: (1.866,7.133,163.234)
C2: (7.751,8.263,160.066)
C1': (6.871,6.111,160.657)
C3': (6.211,4.822,162.570)
O5': (3.444,5.620,162.026)
O4': (5.656,5.476,160.392)
C5': (3.926,4.371,161.583)
P: (2.036,5.753,162.746)
C4': (5.398,4.446,161.351)
C2': (7.362,5.687,162.040)
O2': (8.557,4.925,161.892)
N1: (6.667,7.554,160.533)
O4: (6.270,11.472,159.948)
O2: (8.821,7.712,159.827)
C6: (5.443,8.131,160.776)
C5: (5.254,9.445,160.613)
O3': (6.640,3.684,163.284)
Image (generated by PyMOL):