ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8T:A198:A199

Extra

PDB:
ATOM 1 O3' C A 197 -42.027 159.121 147.978 1.00 0.64 O
ATOM 2 P A A 198 -41.035 160.370 148.169 1.00 5.15 P
ATOM 3 OP1 A A 198 -39.651 159.840 148.085 1.00 5.15 O
ATOM 4 OP2 A A 198 -41.471 161.087 149.402 1.00 5.15 O
ATOM 5 O5' A A 198 -41.333 161.280 146.901 1.00 5.15 O
ATOM 6 C5' A A 198 -40.413 161.310 145.826 1.00 5.15 C
ATOM 7 C4' A A 198 -40.893 162.149 144.677 1.00 5.15 C
ATOM 8 O4' A A 198 -41.965 161.465 143.963 1.00 5.15 O
ATOM 9 C3' A A 198 -41.427 163.545 145.027 1.00 5.15 C
ATOM 10 O3' A A 198 -40.766 164.519 144.222 1.00 5.15 O
ATOM 11 C2' A A 198 -42.903 163.483 144.615 1.00 5.15 C
ATOM 12 O2' A A 198 -43.421 164.708 144.151 1.00 5.15 O
ATOM 13 C1' A A 198 -42.859 162.446 143.508 1.00 5.15 C
ATOM 14 N9 A A 198 -44.145 161.840 143.163 1.00 5.51 N
ATOM 15 C8 A A 198 -45.407 162.045 143.647 1.00 5.51 C
ATOM 16 N7 A A 198 -46.348 161.362 143.023 1.00 5.51 N
ATOM 17 C5 A A 198 -45.660 160.686 142.041 1.00 5.51 C
ATOM 18 C6 A A 198 -46.074 159.800 141.034 1.00 5.51 C
ATOM 19 N6 A A 198 -47.336 159.396 140.816 1.00 5.51 N
ATOM 20 N1 A A 198 -45.089 159.325 140.225 1.00 5.51 N
ATOM 21 C2 A A 198 -43.805 159.704 140.411 1.00 5.51 C
ATOM 22 N3 A A 198 -43.298 160.535 141.317 1.00 5.51 N
ATOM 23 C4 A A 198 -44.301 160.986 142.106 1.00 5.51 C
ATOM 24 P U A 199 -39.852 165.638 144.903 1.00 11.42 P
ATOM 25 OP1 U A 199 -38.660 165.828 144.036 1.00 11.42 O
ATOM 26 OP2 U A 199 -39.642 165.227 146.307 1.00 11.42 O
ATOM 27 O5' U A 199 -40.785 166.922 144.823 1.00 11.42 O
TER

ATOM 1 O3' A B 198 -40.766 164.519 144.222 1.00 5.15 O
ATOM 2 P U B 199 -39.852 165.638 144.903 1.00 11.42 P
ATOM 3 OP1 U B 199 -38.660 165.828 144.036 1.00 11.42 O
ATOM 4 OP2 U B 199 -39.642 165.227 146.307 1.00 11.42 O
ATOM 5 O5' U B 199 -40.785 166.922 144.823 1.00 11.42 O
ATOM 6 C5' U B 199 -40.761 167.728 143.656 1.00 11.42 C
ATOM 7 C4' U B 199 -41.889 168.724 143.612 1.00 11.42 C
ATOM 8 O4' U B 199 -43.158 168.058 143.727 1.00 11.42 O
ATOM 9 C3' U B 199 -41.929 169.753 144.718 1.00 11.42 C
ATOM 10 O3' U B 199 -40.995 170.781 144.529 1.00 11.42 O
ATOM 11 C2' U B 199 -43.360 170.236 144.636 1.00 11.42 C
ATOM 12 O2' U B 199 -43.518 171.139 143.557 1.00 11.42 O
ATOM 13 C1' U B 199 -44.096 168.953 144.281 1.00 11.42 C
ATOM 14 N1 U B 199 -44.732 168.332 145.459 1.00 11.53 N
ATOM 15 C2 U B 199 -45.912 168.929 145.902 1.00 11.53 C
ATOM 16 O2 U B 199 -46.414 169.918 145.391 1.00 11.53 O
ATOM 17 N3 U B 199 -46.479 168.309 146.976 1.00 11.53 N
ATOM 18 C4 U B 199 -46.000 167.191 147.638 1.00 11.53 C
ATOM 19 O4 U B 199 -46.641 166.761 148.600 1.00 11.53 O
ATOM 20 C5 U B 199 -44.780 166.634 147.131 1.00 11.53 C
ATOM 21 C6 U B 199 -44.198 167.210 146.073 1.00 11.53 C
ATOM 22 P C B 200 -39.754 170.927 145.517 1.00 4.06 P
ATOM 23 OP1 C B 200 -38.968 172.079 145.048 1.00 4.06 O
ATOM 24 OP2 C B 200 -39.095 169.604 145.590 1.00 4.06 O
ATOM 25 O5' C B 200 -40.453 171.280 146.898 1.00 4.06 O
TER

Atoms:
OP1: (-39.651,159.840,148.085)
OP2: (-41.471,161.087,149.402)
C3': (-41.427,163.545,145.027)
C1': (-42.859,162.446,143.508)
C5': (-40.413,161.310,145.826)
O4': (-41.965,161.465,143.963)
C8: (-45.407,162.045,143.647)
O2': (-43.421,164.708,144.151)
C6: (-46.074,159.800,141.034)
C5: (-45.660,160.686,142.041)
C4: (-44.301,160.986,142.106)
P: (-41.035,160.370,148.169)
C4': (-40.893,162.149,144.677)
C2': (-42.903,163.483,144.615)
C2: (-43.805,159.704,140.411)
N1: (-45.089,159.325,140.225)
N3: (-43.298,160.535,141.317)
N6: (-47.336,159.396,140.816)
N7: (-46.348,161.362,143.023)
N9: (-44.145,161.840,143.163)
O5': (-41.333,161.280,146.901)
O3': (-40.766,164.519,144.222)
C4: (-46.000,167.191,147.638)
N3: (-46.479,168.309,146.976)
OP1: (-38.660,165.828,144.036)
OP2: (-39.642,165.227,146.307)
C2: (-45.912,168.929,145.902)
C1': (-44.096,168.953,144.281)
C3': (-41.929,169.753,144.718)
O5': (-40.785,166.922,144.823)
O4': (-43.158,168.058,143.727)
C5': (-40.761,167.728,143.656)
P: (-39.852,165.638,144.903)
C4': (-41.889,168.724,143.612)
C2': (-43.360,170.236,144.636)
O2': (-43.518,171.139,143.557)
N1: (-44.732,168.332,145.459)
O4: (-46.641,166.761,148.600)
O2: (-46.414,169.918,145.391)
C6: (-44.198,167.210,146.073)
C5: (-44.780,166.634,147.131)
O3': (-40.995,170.781,144.529)
Image (generated by PyMOL):
PyMOL image
show in jmol