ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:11375:11376

Extra

PDB:
ATOM 1 O3' U A1374 71.630 -7.768 76.793 1.00 30.87 O
ATOM 2 P G A1375 70.602 -7.933 75.601 1.00 30.32 P
ATOM 3 OP1 G A1375 69.280 -7.555 76.158 1.00 30.20 O
ATOM 4 OP2 G A1375 70.779 -9.295 75.040 1.00 30.31 O
ATOM 5 O5' G A1375 71.096 -6.879 74.551 1.00 30.31 O
ATOM 6 C5' G A1375 71.432 -5.572 74.944 1.00 30.39 C
ATOM 7 C4' G A1375 72.056 -4.809 73.807 1.00 30.40 C
ATOM 8 O4' G A1375 73.165 -5.574 73.292 1.00 30.51 O
ATOM 9 C3' G A1375 71.149 -4.570 72.626 1.00 30.20 C
ATOM 10 O3' G A1375 71.615 -3.460 71.918 1.00 30.24 O
ATOM 11 C2' G A1375 71.408 -5.798 71.788 1.00 30.16 C
ATOM 12 O2' G A1375 71.044 -5.659 70.425 1.00 30.03 O
ATOM 13 C1' G A1375 72.916 -5.937 71.963 1.00 30.38 C
ATOM 14 N9 G A1375 73.390 -7.289 71.779 1.00 30.43 N
ATOM 15 C8 G A1375 72.922 -8.358 72.476 1.00 30.41 C
ATOM 16 N7 G A1375 73.490 -9.452 72.118 1.00 30.48 N
ATOM 17 C5 G A1375 74.348 -9.075 71.078 1.00 30.54 C
ATOM 18 C6 G A1375 75.247 -9.846 70.280 1.00 30.64 C
ATOM 19 O6 G A1375 75.469 -11.040 70.273 1.00 30.70 O
ATOM 20 N1 G A1375 75.954 -9.089 69.406 1.00 30.69 N
ATOM 21 C2 G A1375 75.816 -7.726 69.298 1.00 30.65 C
ATOM 22 N2 G A1375 76.626 -7.183 68.369 1.00 30.73 N
ATOM 23 N3 G A1375 74.974 -6.962 70.029 1.00 30.56 N
ATOM 24 C4 G A1375 74.292 -7.719 70.885 1.00 30.51 C
ATOM 25 P C A1376 70.987 -2.022 72.135 1.00 34.53 P
ATOM 26 OP1 C A1376 71.910 -1.068 71.426 1.00 34.65 O
ATOM 27 OP2 C A1376 70.747 -1.854 73.592 1.00 34.61 O
ATOM 28 O5' C A1376 69.592 -2.115 71.369 1.00 34.30 O
TER

ATOM 1 O3' G B1375 71.615 -3.460 71.918 1.00 30.24 O
ATOM 2 P C B1376 70.987 -2.022 72.135 1.00 34.53 P
ATOM 3 OP1 C B1376 71.910 -1.068 71.426 1.00 34.65 O
ATOM 4 OP2 C B1376 70.747 -1.854 73.592 1.00 34.61 O
ATOM 5 O5' C B1376 69.592 -2.115 71.369 1.00 34.30 O
ATOM 6 C5' C B1376 69.508 -1.981 69.959 1.00 34.22 C
ATOM 7 C4' C B1376 68.088 -1.748 69.500 1.00 34.03 C
ATOM 8 O4' C B1376 67.200 -2.689 70.173 1.00 33.93 O
ATOM 9 C3' C B1376 67.512 -0.364 69.795 1.00 34.04 C
ATOM 10 O3' C B1376 66.515 -0.040 68.816 1.00 33.90 O
ATOM 11 C2' C B1376 66.812 -0.611 71.127 1.00 34.02 C
ATOM 12 O2' C B1376 65.819 0.305 71.438 1.00 33.97 O
ATOM 13 C1' C B1376 66.218 -1.970 70.897 1.00 33.89 C
ATOM 14 N1 C B1376 65.913 -2.705 72.138 1.00 33.90 N
ATOM 15 C2 C B1376 64.648 -3.202 72.356 1.00 33.76 C
ATOM 16 O2 C B1376 63.819 -3.014 71.523 1.00 33.64 O
ATOM 17 N3 C B1376 64.317 -3.883 73.430 1.00 33.78 N
ATOM 18 C4 C B1376 65.235 -4.111 74.353 1.00 33.94 C
ATOM 19 N4 C B1376 64.911 -4.816 75.444 1.00 33.97 N
ATOM 20 C5 C B1376 66.549 -3.627 74.178 1.00 34.08 C
ATOM 21 C6 C B1376 66.848 -2.952 73.071 1.00 34.06 C
ATOM 22 P A B1377 66.895 0.466 67.330 1.00 30.58 P
ATOM 23 OP1 A B1377 66.327 -0.486 66.355 1.00 30.45 O
ATOM 24 OP2 A B1377 68.326 0.740 67.314 1.00 30.76 O
ATOM 25 O5' A B1377 66.083 1.813 67.217 1.00 30.57 O
TER

Atoms:
OP1: (69.280,-7.555,76.158)
OP2: (70.779,-9.295,75.040)
C3': (71.149,-4.570,72.626)
C1': (72.916,-5.937,71.963)
C5': (71.432,-5.572,74.944)
O6: (75.469,-11.040,70.273)
O4': (73.165,-5.574,73.292)
C8: (72.922,-8.358,72.476)
C2: (75.816,-7.726,69.298)
C6: (75.247,-9.846,70.280)
C5: (74.348,-9.075,71.078)
C4: (74.292,-7.719,70.885)
P: (70.602,-7.933,75.601)
C4': (72.056,-4.809,73.807)
C2': (71.408,-5.798,71.788)
O2': (71.044,-5.659,70.425)
N1: (75.954,-9.089,69.406)
N2: (76.626,-7.183,68.369)
N3: (74.974,-6.962,70.029)
N7: (73.490,-9.452,72.118)
N9: (73.390,-7.289,71.779)
O5': (71.096,-6.879,74.551)
O3': (71.615,-3.460,71.918)
C2: (64.648,-3.202,72.356)
OP1: (71.910,-1.068,71.426)
OP2: (70.747,-1.854,73.592)
C4: (65.235,-4.111,74.353)
O5': (69.592,-2.115,71.369)
C3': (67.512,-0.364,69.795)
C1': (66.218,-1.970,70.897)
O4': (67.200,-2.689,70.173)
C5': (69.508,-1.981,69.959)
P: (70.987,-2.022,72.135)
O2: (63.819,-3.014,71.523)
C4': (68.088,-1.748,69.500)
C2': (66.812,-0.611,71.127)
O2': (65.819,0.305,71.438)
N1: (65.913,-2.705,72.138)
N3: (64.317,-3.883,73.430)
N4: (64.911,-4.816,75.444)
C6: (66.848,-2.952,73.071)
C5: (66.549,-3.627,74.178)
O3': (66.515,-0.040,68.816)
Image (generated by PyMOL):
PyMOL image
show in jmol