ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHJ:A180:A181

Extra

PDB:
ATOM 1 O3' C A 179 86.669 -43.328 -42.715 1.00 38.79 O
ATOM 2 P A A 180 85.547 -43.638 -43.827 1.00 30.45 P
ATOM 3 OP1 A A 180 84.234 -43.474 -43.149 1.00 35.43 O
ATOM 4 OP2 A A 180 85.880 -44.961 -44.440 1.00 29.50 O
ATOM 5 O5' A A 180 85.764 -42.477 -44.892 1.00 31.48 O
ATOM 6 C5' A A 180 85.573 -41.132 -44.513 1.00 38.73 C
ATOM 7 C4' A A 180 86.089 -40.163 -45.535 1.00 37.11 C
ATOM 8 O4' A A 180 87.225 -39.462 -44.980 1.00 38.28 O
ATOM 9 C3' A A 180 86.530 -40.750 -46.883 1.00 38.54 C
ATOM 10 O3' A A 180 85.958 -39.984 -47.946 1.00 45.18 O
ATOM 11 C2' A A 180 88.048 -40.538 -46.893 1.00 37.64 C
ATOM 12 O2' A A 180 88.578 -40.254 -48.174 1.00 29.74 O
ATOM 13 C1' A A 180 88.219 -39.344 -45.965 1.00 36.88 C
ATOM 14 N9 A A 180 89.526 -39.267 -45.310 1.00 33.25 N
ATOM 15 C8 A A 180 90.605 -40.112 -45.383 1.00 34.70 C
ATOM 16 N7 A A 180 91.649 -39.729 -44.674 1.00 34.00 N
ATOM 17 C5 A A 180 91.221 -38.537 -44.121 1.00 33.81 C
ATOM 18 C6 A A 180 91.832 -37.606 -43.277 1.00 37.25 C
ATOM 19 N6 A A 180 93.075 -37.727 -42.817 1.00 42.45 N
ATOM 20 N1 A A 180 91.130 -36.528 -42.880 1.00 36.66 N
ATOM 21 C2 A A 180 89.887 -36.384 -43.331 1.00 33.68 C
ATOM 22 N3 A A 180 89.206 -37.184 -44.138 1.00 39.23 N
ATOM 23 C4 A A 180 89.933 -38.249 -44.498 1.00 32.85 C
ATOM 24 P U A 181 84.949 -40.651 -49.014 1.00 24.79 P
ATOM 25 OP1 U A 181 83.795 -39.732 -49.131 1.00 34.73 O
ATOM 26 OP2 U A 181 84.707 -42.058 -48.595 1.00 32.84 O
ATOM 27 O5' U A 181 85.790 -40.635 -50.377 1.00 32.40 O
TER

ATOM 1 O3' A B 180 85.958 -39.984 -47.946 1.00 45.18 O
ATOM 2 P U B 181 84.949 -40.651 -49.014 1.00 24.79 P
ATOM 3 OP1 U B 181 83.795 -39.732 -49.131 1.00 34.73 O
ATOM 4 OP2 U B 181 84.707 -42.058 -48.595 1.00 32.84 O
ATOM 5 O5' U B 181 85.790 -40.635 -50.377 1.00 32.40 O
ATOM 6 C5' U B 181 86.024 -39.429 -51.085 1.00 29.77 C
ATOM 7 C4' U B 181 87.115 -39.580 -52.121 1.00 32.74 C
ATOM 8 O4' U B 181 88.394 -39.850 -51.483 1.00 33.87 O
ATOM 9 C3' U B 181 86.958 -40.718 -53.111 1.00 32.84 C
ATOM 10 O3' U B 181 86.030 -40.425 -54.141 1.00 33.44 O
ATOM 11 C2' U B 181 88.379 -40.902 -53.620 1.00 29.32 C
ATOM 12 O2' U B 181 88.671 -39.936 -54.608 1.00 40.14 O
ATOM 13 C1' U B 181 89.216 -40.587 -52.370 1.00 28.71 C
ATOM 14 N1 U B 181 89.665 -41.828 -51.707 1.00 34.22 N
ATOM 15 C2 U B 181 90.763 -42.447 -52.272 1.00 34.52 C
ATOM 16 O2 U B 181 91.362 -41.957 -53.214 1.00 40.04 O
ATOM 17 N3 U B 181 91.128 -43.644 -51.700 1.00 31.35 N
ATOM 18 C4 U B 181 90.514 -44.259 -50.633 1.00 30.44 C
ATOM 19 O4 U B 181 90.944 -45.317 -50.211 1.00 30.65 O
ATOM 20 C5 U B 181 89.385 -43.568 -50.108 1.00 29.95 C
ATOM 21 C6 U B 181 88.999 -42.409 -50.655 1.00 34.48 C
ATOM 22 P C B 182 84.913 -41.496 -54.529 1.00 41.57 P
ATOM 23 OP1 C B 182 84.472 -41.212 -55.925 1.00 33.56 O
ATOM 24 OP2 C B 182 83.900 -41.468 -53.430 1.00 39.50 O
ATOM 25 O5' C B 182 85.733 -42.867 -54.494 1.00 32.34 O
TER

Atoms:
OP1: (84.234,-43.474,-43.149)
OP2: (85.880,-44.961,-44.440)
C3': (86.530,-40.750,-46.883)
C1': (88.219,-39.344,-45.965)
C5': (85.573,-41.132,-44.513)
O4': (87.225,-39.462,-44.980)
C8: (90.605,-40.112,-45.383)
O2': (88.578,-40.254,-48.174)
C6: (91.832,-37.606,-43.277)
C5: (91.221,-38.537,-44.121)
C4: (89.933,-38.249,-44.498)
P: (85.547,-43.638,-43.827)
C4': (86.089,-40.163,-45.535)
C2': (88.048,-40.538,-46.893)
C2: (89.887,-36.384,-43.331)
N1: (91.130,-36.528,-42.880)
N3: (89.206,-37.184,-44.138)
N6: (93.075,-37.727,-42.817)
N7: (91.649,-39.729,-44.674)
N9: (89.526,-39.267,-45.310)
O5': (85.764,-42.477,-44.892)
O3': (85.958,-39.984,-47.946)
C4: (90.514,-44.259,-50.633)
N3: (91.128,-43.644,-51.700)
OP1: (83.795,-39.732,-49.131)
OP2: (84.707,-42.058,-48.595)
C2: (90.763,-42.447,-52.272)
C1': (89.216,-40.587,-52.370)
C3': (86.958,-40.718,-53.111)
O5': (85.790,-40.635,-50.377)
O4': (88.394,-39.850,-51.483)
C5': (86.024,-39.429,-51.085)
P: (84.949,-40.651,-49.014)
C4': (87.115,-39.580,-52.121)
C2': (88.379,-40.902,-53.620)
O2': (88.671,-39.936,-54.608)
N1: (89.665,-41.828,-51.707)
O4: (90.944,-45.317,-50.211)
O2: (91.362,-41.957,-53.214)
C6: (88.999,-42.409,-50.655)
C5: (89.385,-43.568,-50.108)
O3': (86.030,-40.425,-54.141)
Image (generated by PyMOL):
PyMOL image
show in jmol