ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A317:A318

Extra

PDB:
ATOM 1 O3' G A 316 117.895 59.585 -9.463 1.00 30.01 O
ATOM 2 P A A 317 118.874 58.721 -10.394 1.00 31.34 P
ATOM 3 OP1 A A 317 119.577 59.651 -11.324 1.00 32.74 O
ATOM 4 OP2 A A 317 118.085 57.609 -10.976 1.00 31.12 O
ATOM 5 O5' A A 317 119.959 58.155 -9.364 1.00 30.58 O
ATOM 6 C5' A A 317 120.669 59.048 -8.489 1.00 30.19 C
ATOM 7 C4' A A 317 121.988 58.439 -8.049 1.00 31.21 C
ATOM 8 O4' A A 317 121.774 57.491 -6.971 1.00 31.27 O
ATOM 9 C3' A A 317 122.818 57.715 -9.115 1.00 31.55 C
ATOM 10 O3' A A 317 124.218 58.004 -8.926 1.00 30.22 O
ATOM 11 C2' A A 317 122.544 56.243 -8.796 1.00 31.26 C
ATOM 12 O2' A A 317 123.557 55.321 -9.135 1.00 32.43 O
ATOM 13 C1' A A 317 122.430 56.283 -7.279 1.00 30.74 C
ATOM 14 N9 A A 317 121.678 55.177 -6.702 1.00 29.47 N
ATOM 15 C8 A A 317 120.888 54.246 -7.320 1.00 28.69 C
ATOM 16 N7 A A 317 120.353 53.386 -6.496 1.00 31.85 N
ATOM 17 C5 A A 317 120.826 53.777 -5.251 1.00 30.33 C
ATOM 18 C6 A A 317 120.616 53.278 -3.957 1.00 30.26 C
ATOM 19 N6 A A 317 119.835 52.232 -3.678 1.00 28.80 N
ATOM 20 N1 A A 317 121.237 53.905 -2.938 1.00 31.21 N
ATOM 21 C2 A A 317 122.004 54.962 -3.209 1.00 30.99 C
ATOM 22 N3 A A 317 122.274 55.523 -4.375 1.00 30.79 N
ATOM 23 C4 A A 317 121.645 54.875 -5.367 1.00 29.81 C
ATOM 24 P C A 318 124.841 59.383 -9.485 1.00 29.62 P
ATOM 25 OP1 C A 318 125.851 59.794 -8.460 1.00 30.18 O
ATOM 26 OP2 C A 318 123.733 60.290 -9.884 1.00 30.26 O
ATOM 27 O5' C A 318 125.641 59.022 -10.781 1.00 29.02 O
TER

ATOM 1 O3' A B 317 124.218 58.004 -8.926 1.00 30.22 O
ATOM 2 P C B 318 124.841 59.383 -9.485 1.00 29.62 P
ATOM 3 OP1 C B 318 125.851 59.794 -8.460 1.00 30.18 O
ATOM 4 OP2 C B 318 123.733 60.290 -9.884 1.00 30.26 O
ATOM 5 O5' C B 318 125.641 59.022 -10.781 1.00 29.02 O
ATOM 6 C5' C B 318 125.288 57.899 -11.534 1.00 31.65 C
ATOM 7 C4' C B 318 125.855 56.700 -10.862 1.00 33.69 C
ATOM 8 O4' C B 318 124.969 55.590 -11.032 1.00 35.97 O
ATOM 9 C3' C B 318 127.243 56.271 -11.250 1.00 34.00 C
ATOM 10 O3' C B 318 128.078 56.329 -10.045 1.00 37.87 O
ATOM 11 C2' C B 318 126.991 55.034 -12.113 1.00 32.23 C
ATOM 12 O2' C B 318 128.012 54.074 -12.096 1.00 32.45 O
ATOM 13 C1' C B 318 125.639 54.511 -11.607 1.00 32.70 C
ATOM 14 N1 C B 318 124.675 53.981 -12.591 1.00 31.90 N
ATOM 15 C2 C B 318 124.921 54.117 -13.958 1.00 31.58 C
ATOM 16 O2 C B 318 125.966 54.654 -14.331 1.00 34.18 O
ATOM 17 N3 C B 318 124.013 53.660 -14.844 1.00 30.40 N
ATOM 18 C4 C B 318 122.901 53.076 -14.416 1.00 28.75 C
ATOM 19 N4 C B 318 122.056 52.632 -15.343 1.00 28.12 N
ATOM 20 C5 C B 318 122.614 52.921 -13.023 1.00 28.74 C
ATOM 21 C6 C B 318 123.522 53.380 -12.155 1.00 28.73 C
ATOM 22 P A B 319 128.505 55.010 -9.235 1.00 37.54 P
ATOM 23 OP1 A B 319 129.979 54.838 -9.366 1.00 36.37 O
ATOM 24 OP2 A B 319 127.596 53.940 -9.639 1.00 41.42 O
ATOM 25 O5' A B 319 128.207 55.386 -7.719 1.00 36.88 O
TER

Atoms:
OP1: (119.577,59.651,-11.324)
OP2: (118.085,57.609,-10.976)
C3': (122.818,57.715,-9.115)
C1': (122.430,56.283,-7.279)
C5': (120.669,59.048,-8.489)
O4': (121.774,57.491,-6.971)
C8: (120.888,54.246,-7.320)
O2': (123.557,55.321,-9.135)
C6: (120.616,53.278,-3.957)
C5: (120.826,53.777,-5.251)
C4: (121.645,54.875,-5.367)
P: (118.874,58.721,-10.394)
C4': (121.988,58.439,-8.049)
C2': (122.544,56.243,-8.796)
C2: (122.004,54.962,-3.209)
N1: (121.237,53.905,-2.938)
N3: (122.274,55.523,-4.375)
N6: (119.835,52.232,-3.678)
N7: (120.353,53.386,-6.496)
N9: (121.678,55.177,-6.702)
O5': (119.959,58.155,-9.364)
O3': (124.218,58.004,-8.926)
C2: (124.921,54.117,-13.958)
OP1: (125.851,59.794,-8.460)
OP2: (123.733,60.290,-9.884)
C4: (122.901,53.076,-14.416)
O5': (125.641,59.022,-10.781)
C3': (127.243,56.271,-11.250)
C1': (125.639,54.511,-11.607)
O4': (124.969,55.590,-11.032)
C5': (125.288,57.899,-11.534)
P: (124.841,59.383,-9.485)
O2: (125.966,54.654,-14.331)
C4': (125.855,56.700,-10.862)
C2': (126.991,55.034,-12.113)
O2': (128.012,54.074,-12.096)
N1: (124.675,53.981,-12.591)
N3: (124.013,53.660,-14.844)
N4: (122.056,52.632,-15.343)
C6: (123.522,53.380,-12.155)
C5: (122.614,52.921,-13.023)
O3': (128.078,56.329,-10.045)
Image (generated by PyMOL):
PyMOL image
show in jmol