Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R9W:B25:B26
Extra
PDB:
ATOM 1 O3' G A 24 -18.346 -28.435 -5.606 1.00 57.84 O
ATOM 2 P A A 25 -18.500 -29.973 -6.036 1.00 59.78 P
ATOM 3 OP1 A A 25 -19.298 -30.002 -7.283 1.00 60.20 O
ATOM 4 OP2 A A 25 -18.996 -30.706 -4.847 1.00 62.22 O
ATOM 5 O5' A A 25 -17.004 -30.399 -6.342 1.00 67.16 O
ATOM 6 C5' A A 25 -16.711 -31.507 -7.182 1.00 58.55 C
ATOM 7 C4' A A 25 -15.445 -31.271 -7.957 1.00 55.15 C
ATOM 8 O4' A A 25 -15.676 -30.190 -8.895 1.00 53.76 O
ATOM 9 C3' A A 25 -14.243 -30.840 -7.113 1.00 51.35 C
ATOM 10 O3' A A 25 -13.043 -31.273 -7.749 1.00 51.54 O
ATOM 11 C2' A A 25 -14.330 -29.320 -7.193 1.00 52.73 C
ATOM 12 O2' A A 25 -13.117 -28.638 -6.930 1.00 51.39 O
ATOM 13 C1' A A 25 -14.770 -29.138 -8.635 1.00 54.80 C
ATOM 14 N9 A A 25 -15.442 -27.872 -8.889 1.00 54.45 N
ATOM 15 C8 A A 25 -16.439 -27.270 -8.176 1.00 55.25 C
ATOM 16 N7 A A 25 -16.799 -26.120 -8.710 1.00 57.94 N
ATOM 17 C5 A A 25 -15.981 -25.974 -9.815 1.00 47.41 C
ATOM 18 C6 A A 25 -15.846 -24.970 -10.788 1.00 51.82 C
ATOM 19 N6 A A 25 -16.572 -23.849 -10.826 1.00 52.66 N
ATOM 20 N1 A A 25 -14.933 -25.169 -11.758 1.00 49.65 N
ATOM 21 C2 A A 25 -14.187 -26.276 -11.745 1.00 49.50 C
ATOM 22 N3 A A 25 -14.205 -27.273 -10.869 1.00 54.70 N
ATOM 23 C4 A A 25 -15.138 -27.051 -9.929 1.00 49.67 C
ATOM 24 P U A 26 -12.211 -32.517 -7.173 1.00 58.76 P
ATOM 25 OP1 U A 26 -10.882 -32.510 -7.848 1.00 57.56 O
ATOM 26 OP2 U A 26 -13.070 -33.716 -7.315 1.00 73.30 O
ATOM 27 O5' U A 26 -12.046 -32.156 -5.638 1.00 57.70 O
TER
ATOM 1 O3' A B 25 -13.043 -31.273 -7.749 1.00 51.54 O
ATOM 2 P U B 26 -12.211 -32.517 -7.173 1.00 58.76 P
ATOM 3 OP1 U B 26 -10.882 -32.510 -7.848 1.00 57.56 O
ATOM 4 OP2 U B 26 -13.070 -33.716 -7.315 1.00 73.30 O
ATOM 5 O5' U B 26 -12.046 -32.156 -5.638 1.00 57.70 O
ATOM 6 C5' U B 26 -11.365 -30.980 -5.234 1.00 55.93 C
ATOM 7 C4' U B 26 -11.444 -30.789 -3.744 1.00 55.08 C
ATOM 8 O4' U B 26 -12.799 -30.408 -3.379 1.00 57.85 O
ATOM 9 C3' U B 26 -11.113 -32.028 -2.902 1.00 56.15 C
ATOM 10 O3' U B 26 -10.479 -31.609 -1.703 1.00 55.04 O
ATOM 11 C2' U B 26 -12.498 -32.561 -2.543 1.00 63.59 C
ATOM 12 O2' U B 26 -12.528 -33.366 -1.379 1.00 63.37 O
ATOM 13 C1' U B 26 -13.250 -31.253 -2.339 1.00 59.96 C
ATOM 14 N1 U B 26 -14.733 -31.365 -2.400 1.00 58.44 N
ATOM 15 C2 U B 26 -15.426 -30.627 -1.456 1.00 64.26 C
ATOM 16 O2 U B 26 -14.860 -29.925 -0.643 1.00 69.59 O
ATOM 17 N3 U B 26 -16.797 -30.725 -1.486 1.00 62.17 N
ATOM 18 C4 U B 26 -17.544 -31.494 -2.351 1.00 61.20 C
ATOM 19 O4 U B 26 -18.770 -31.480 -2.250 1.00 58.94 O
ATOM 20 C5 U B 26 -16.767 -32.238 -3.299 1.00 59.00 C
ATOM 21 C6 U B 26 -15.423 -32.156 -3.292 1.00 60.14 C
ATOM 22 P C B 27 -8.948 -31.957 -1.420 1.00 72.15 P
ATOM 23 OP1 C B 27 -8.537 -32.991 -2.402 1.00 60.37 O
ATOM 24 OP2 C B 27 -8.835 -32.258 0.029 1.00 77.53 O
ATOM 25 O5' C B 27 -8.233 -30.582 -1.736 1.00 69.46 O
TER
ATOM 2 P A A 25 -18.500 -29.973 -6.036 1.00 59.78 P
ATOM 3 OP1 A A 25 -19.298 -30.002 -7.283 1.00 60.20 O
ATOM 4 OP2 A A 25 -18.996 -30.706 -4.847 1.00 62.22 O
ATOM 5 O5' A A 25 -17.004 -30.399 -6.342 1.00 67.16 O
ATOM 6 C5' A A 25 -16.711 -31.507 -7.182 1.00 58.55 C
ATOM 7 C4' A A 25 -15.445 -31.271 -7.957 1.00 55.15 C
ATOM 8 O4' A A 25 -15.676 -30.190 -8.895 1.00 53.76 O
ATOM 9 C3' A A 25 -14.243 -30.840 -7.113 1.00 51.35 C
ATOM 10 O3' A A 25 -13.043 -31.273 -7.749 1.00 51.54 O
ATOM 11 C2' A A 25 -14.330 -29.320 -7.193 1.00 52.73 C
ATOM 12 O2' A A 25 -13.117 -28.638 -6.930 1.00 51.39 O
ATOM 13 C1' A A 25 -14.770 -29.138 -8.635 1.00 54.80 C
ATOM 14 N9 A A 25 -15.442 -27.872 -8.889 1.00 54.45 N
ATOM 15 C8 A A 25 -16.439 -27.270 -8.176 1.00 55.25 C
ATOM 16 N7 A A 25 -16.799 -26.120 -8.710 1.00 57.94 N
ATOM 17 C5 A A 25 -15.981 -25.974 -9.815 1.00 47.41 C
ATOM 18 C6 A A 25 -15.846 -24.970 -10.788 1.00 51.82 C
ATOM 19 N6 A A 25 -16.572 -23.849 -10.826 1.00 52.66 N
ATOM 20 N1 A A 25 -14.933 -25.169 -11.758 1.00 49.65 N
ATOM 21 C2 A A 25 -14.187 -26.276 -11.745 1.00 49.50 C
ATOM 22 N3 A A 25 -14.205 -27.273 -10.869 1.00 54.70 N
ATOM 23 C4 A A 25 -15.138 -27.051 -9.929 1.00 49.67 C
ATOM 24 P U A 26 -12.211 -32.517 -7.173 1.00 58.76 P
ATOM 25 OP1 U A 26 -10.882 -32.510 -7.848 1.00 57.56 O
ATOM 26 OP2 U A 26 -13.070 -33.716 -7.315 1.00 73.30 O
ATOM 27 O5' U A 26 -12.046 -32.156 -5.638 1.00 57.70 O
TER
ATOM 1 O3' A B 25 -13.043 -31.273 -7.749 1.00 51.54 O
ATOM 2 P U B 26 -12.211 -32.517 -7.173 1.00 58.76 P
ATOM 3 OP1 U B 26 -10.882 -32.510 -7.848 1.00 57.56 O
ATOM 4 OP2 U B 26 -13.070 -33.716 -7.315 1.00 73.30 O
ATOM 5 O5' U B 26 -12.046 -32.156 -5.638 1.00 57.70 O
ATOM 6 C5' U B 26 -11.365 -30.980 -5.234 1.00 55.93 C
ATOM 7 C4' U B 26 -11.444 -30.789 -3.744 1.00 55.08 C
ATOM 8 O4' U B 26 -12.799 -30.408 -3.379 1.00 57.85 O
ATOM 9 C3' U B 26 -11.113 -32.028 -2.902 1.00 56.15 C
ATOM 10 O3' U B 26 -10.479 -31.609 -1.703 1.00 55.04 O
ATOM 11 C2' U B 26 -12.498 -32.561 -2.543 1.00 63.59 C
ATOM 12 O2' U B 26 -12.528 -33.366 -1.379 1.00 63.37 O
ATOM 13 C1' U B 26 -13.250 -31.253 -2.339 1.00 59.96 C
ATOM 14 N1 U B 26 -14.733 -31.365 -2.400 1.00 58.44 N
ATOM 15 C2 U B 26 -15.426 -30.627 -1.456 1.00 64.26 C
ATOM 16 O2 U B 26 -14.860 -29.925 -0.643 1.00 69.59 O
ATOM 17 N3 U B 26 -16.797 -30.725 -1.486 1.00 62.17 N
ATOM 18 C4 U B 26 -17.544 -31.494 -2.351 1.00 61.20 C
ATOM 19 O4 U B 26 -18.770 -31.480 -2.250 1.00 58.94 O
ATOM 20 C5 U B 26 -16.767 -32.238 -3.299 1.00 59.00 C
ATOM 21 C6 U B 26 -15.423 -32.156 -3.292 1.00 60.14 C
ATOM 22 P C B 27 -8.948 -31.957 -1.420 1.00 72.15 P
ATOM 23 OP1 C B 27 -8.537 -32.991 -2.402 1.00 60.37 O
ATOM 24 OP2 C B 27 -8.835 -32.258 0.029 1.00 77.53 O
ATOM 25 O5' C B 27 -8.233 -30.582 -1.736 1.00 69.46 O
TER
Atoms:
OP1: (-19.298,-30.002,-7.283)
OP2: (-18.996,-30.706,-4.847)
C3': (-14.243,-30.840,-7.113)
C1': (-14.770,-29.138,-8.635)
C5': (-16.711,-31.507,-7.182)
O4': (-15.676,-30.190,-8.895)
C8: (-16.439,-27.270,-8.176)
O2': (-13.117,-28.638,-6.930)
C6: (-15.846,-24.970,-10.788)
C5: (-15.981,-25.974,-9.815)
C4: (-15.138,-27.051,-9.929)
P: (-18.500,-29.973,-6.036)
C4': (-15.445,-31.271,-7.957)
C2': (-14.330,-29.320,-7.193)
C2: (-14.187,-26.276,-11.745)
N1: (-14.933,-25.169,-11.758)
N3: (-14.205,-27.273,-10.869)
N6: (-16.572,-23.849,-10.826)
N7: (-16.799,-26.120,-8.710)
N9: (-15.442,-27.872,-8.889)
O5': (-17.004,-30.399,-6.342)
O3': (-13.043,-31.273,-7.749)
OP2: (-18.996,-30.706,-4.847)
C3': (-14.243,-30.840,-7.113)
C1': (-14.770,-29.138,-8.635)
C5': (-16.711,-31.507,-7.182)
O4': (-15.676,-30.190,-8.895)
C8: (-16.439,-27.270,-8.176)
O2': (-13.117,-28.638,-6.930)
C6: (-15.846,-24.970,-10.788)
C5: (-15.981,-25.974,-9.815)
C4: (-15.138,-27.051,-9.929)
P: (-18.500,-29.973,-6.036)
C4': (-15.445,-31.271,-7.957)
C2': (-14.330,-29.320,-7.193)
C2: (-14.187,-26.276,-11.745)
N1: (-14.933,-25.169,-11.758)
N3: (-14.205,-27.273,-10.869)
N6: (-16.572,-23.849,-10.826)
N7: (-16.799,-26.120,-8.710)
N9: (-15.442,-27.872,-8.889)
O5': (-17.004,-30.399,-6.342)
O3': (-13.043,-31.273,-7.749)
C4: (-17.544,-31.494,-2.351)
N3: (-16.797,-30.725,-1.486)
OP1: (-10.882,-32.510,-7.848)
OP2: (-13.070,-33.716,-7.315)
C2: (-15.426,-30.627,-1.456)
C1': (-13.250,-31.253,-2.339)
C3': (-11.113,-32.028,-2.902)
O5': (-12.046,-32.156,-5.638)
O4': (-12.799,-30.408,-3.379)
C5': (-11.365,-30.980,-5.234)
P: (-12.211,-32.517,-7.173)
C4': (-11.444,-30.789,-3.744)
C2': (-12.498,-32.561,-2.543)
O2': (-12.528,-33.366,-1.379)
N1: (-14.733,-31.365,-2.400)
O4: (-18.770,-31.480,-2.250)
O2: (-14.860,-29.925,-0.643)
C6: (-15.423,-32.156,-3.292)
C5: (-16.767,-32.238,-3.299)
O3': (-10.479,-31.609,-1.703)
N3: (-16.797,-30.725,-1.486)
OP1: (-10.882,-32.510,-7.848)
OP2: (-13.070,-33.716,-7.315)
C2: (-15.426,-30.627,-1.456)
C1': (-13.250,-31.253,-2.339)
C3': (-11.113,-32.028,-2.902)
O5': (-12.046,-32.156,-5.638)
O4': (-12.799,-30.408,-3.379)
C5': (-11.365,-30.980,-5.234)
P: (-12.211,-32.517,-7.173)
C4': (-11.444,-30.789,-3.744)
C2': (-12.498,-32.561,-2.543)
O2': (-12.528,-33.366,-1.379)
N1: (-14.733,-31.365,-2.400)
O4: (-18.770,-31.480,-2.250)
O2: (-14.860,-29.925,-0.643)
C6: (-15.423,-32.156,-3.292)
C5: (-16.767,-32.238,-3.299)
O3': (-10.479,-31.609,-1.703)
Image (generated by PyMOL):