Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:312:313
Extra
PDB:
ATOM 1 O3' U A 11 25.813 -67.633 11.556 1.00 68.45 O
ATOM 2 P A A 12 24.332 -68.027 11.871 1.00 67.82 P
ATOM 3 OP1 A A 12 23.642 -68.341 10.572 1.00 68.90 O
ATOM 4 OP2 A A 12 23.800 -66.944 12.736 1.00 66.92 O
ATOM 5 O5' A A 12 24.483 -69.344 12.704 1.00 67.76 O
ATOM 6 C5' A A 12 24.008 -69.315 13.997 1.00 66.98 C
ATOM 7 C4' A A 12 23.626 -70.629 14.530 1.00 67.22 C
ATOM 8 O4' A A 12 24.832 -71.273 14.984 1.00 67.00 O
ATOM 9 C3' A A 12 22.805 -70.440 15.765 1.00 66.49 C
ATOM 10 O3' A A 12 22.200 -71.634 16.151 1.00 66.83 O
ATOM 11 C2' A A 12 23.856 -70.077 16.778 1.00 65.53 C
ATOM 12 O2' A A 12 23.456 -70.261 18.114 1.00 64.83 O
ATOM 13 C1' A A 12 24.983 -71.030 16.387 1.00 65.97 C
ATOM 14 N9 A A 12 26.304 -70.450 16.653 1.00 65.36 N
ATOM 15 C8 A A 12 27.172 -69.706 15.884 1.00 65.42 C
ATOM 16 N7 A A 12 28.242 -69.286 16.548 1.00 64.67 N
ATOM 17 C5 A A 12 28.035 -69.769 17.842 1.00 64.06 C
ATOM 18 C6 A A 12 28.779 -69.708 19.024 1.00 63.18 C
ATOM 19 N6 A A 12 29.949 -69.102 19.135 1.00 62.70 N
ATOM 20 N1 A A 12 28.300 -70.308 20.114 1.00 62.80 N
ATOM 21 C2 A A 12 27.136 -70.934 20.023 1.00 63.29 C
ATOM 22 N3 A A 12 26.354 -71.073 18.982 1.00 64.12 N
ATOM 23 C4 A A 12 26.859 -70.470 17.911 1.00 64.48 C
ATOM 24 P U A 13 20.679 -71.901 15.800 1.00 68.13 P
ATOM 25 OP1 U A 13 20.411 -73.269 16.275 1.00 68.44 O
ATOM 26 OP2 U A 13 20.511 -71.579 14.355 1.00 68.95 O
ATOM 27 O5' U A 13 19.825 -70.845 16.674 1.00 67.30 O
TER
ATOM 1 O3' A B 12 22.200 -71.634 16.151 1.00 66.83 O
ATOM 2 P U B 13 20.679 -71.901 15.800 1.00 68.13 P
ATOM 3 OP1 U B 13 20.411 -73.269 16.275 1.00 68.44 O
ATOM 4 OP2 U B 13 20.511 -71.579 14.355 1.00 68.95 O
ATOM 5 O5' U B 13 19.825 -70.845 16.674 1.00 67.30 O
ATOM 6 C5' U B 13 20.392 -70.040 17.696 1.00 66.24 C
ATOM 7 C4' U B 13 19.526 -68.837 18.019 1.00 65.73 C
ATOM 8 O4' U B 13 20.180 -67.610 17.597 1.00 65.40 O
ATOM 9 C3' U B 13 18.182 -68.763 17.327 1.00 66.38 C
ATOM 10 O3' U B 13 17.200 -69.546 17.939 1.00 66.50 O
ATOM 11 C2' U B 13 17.857 -67.298 17.406 1.00 65.83 C
ATOM 12 O2' U B 13 17.460 -66.981 18.712 1.00 64.99 O
ATOM 13 C1' U B 13 19.213 -66.687 17.134 1.00 65.51 C
ATOM 14 N1 U B 13 19.428 -66.517 15.702 1.00 66.30 N
ATOM 15 C2 U B 13 18.851 -65.479 15.013 1.00 66.45 C
ATOM 16 O2 U B 13 18.152 -64.691 15.597 1.00 65.92 O
ATOM 17 N3 U B 13 19.147 -65.450 13.660 1.00 67.23 N
ATOM 18 C4 U B 13 19.934 -66.334 12.951 1.00 67.88 C
ATOM 19 O4 U B 13 20.109 -66.178 11.749 1.00 68.57 O
ATOM 20 C5 U B 13 20.496 -67.384 13.734 1.00 67.68 C
ATOM 21 C6 U B 13 20.229 -67.440 15.049 1.00 66.92 C
ATOM 22 P C B 14 15.931 -70.046 17.076 1.00 68.05 P
ATOM 23 OP1 C B 14 14.996 -70.712 18.015 1.00 67.93 O
ATOM 24 OP2 C B 14 16.459 -70.819 15.910 1.00 68.98 O
ATOM 25 O5' C B 14 15.300 -68.688 16.553 1.00 67.96 O
TER
ATOM 2 P A A 12 24.332 -68.027 11.871 1.00 67.82 P
ATOM 3 OP1 A A 12 23.642 -68.341 10.572 1.00 68.90 O
ATOM 4 OP2 A A 12 23.800 -66.944 12.736 1.00 66.92 O
ATOM 5 O5' A A 12 24.483 -69.344 12.704 1.00 67.76 O
ATOM 6 C5' A A 12 24.008 -69.315 13.997 1.00 66.98 C
ATOM 7 C4' A A 12 23.626 -70.629 14.530 1.00 67.22 C
ATOM 8 O4' A A 12 24.832 -71.273 14.984 1.00 67.00 O
ATOM 9 C3' A A 12 22.805 -70.440 15.765 1.00 66.49 C
ATOM 10 O3' A A 12 22.200 -71.634 16.151 1.00 66.83 O
ATOM 11 C2' A A 12 23.856 -70.077 16.778 1.00 65.53 C
ATOM 12 O2' A A 12 23.456 -70.261 18.114 1.00 64.83 O
ATOM 13 C1' A A 12 24.983 -71.030 16.387 1.00 65.97 C
ATOM 14 N9 A A 12 26.304 -70.450 16.653 1.00 65.36 N
ATOM 15 C8 A A 12 27.172 -69.706 15.884 1.00 65.42 C
ATOM 16 N7 A A 12 28.242 -69.286 16.548 1.00 64.67 N
ATOM 17 C5 A A 12 28.035 -69.769 17.842 1.00 64.06 C
ATOM 18 C6 A A 12 28.779 -69.708 19.024 1.00 63.18 C
ATOM 19 N6 A A 12 29.949 -69.102 19.135 1.00 62.70 N
ATOM 20 N1 A A 12 28.300 -70.308 20.114 1.00 62.80 N
ATOM 21 C2 A A 12 27.136 -70.934 20.023 1.00 63.29 C
ATOM 22 N3 A A 12 26.354 -71.073 18.982 1.00 64.12 N
ATOM 23 C4 A A 12 26.859 -70.470 17.911 1.00 64.48 C
ATOM 24 P U A 13 20.679 -71.901 15.800 1.00 68.13 P
ATOM 25 OP1 U A 13 20.411 -73.269 16.275 1.00 68.44 O
ATOM 26 OP2 U A 13 20.511 -71.579 14.355 1.00 68.95 O
ATOM 27 O5' U A 13 19.825 -70.845 16.674 1.00 67.30 O
TER
ATOM 1 O3' A B 12 22.200 -71.634 16.151 1.00 66.83 O
ATOM 2 P U B 13 20.679 -71.901 15.800 1.00 68.13 P
ATOM 3 OP1 U B 13 20.411 -73.269 16.275 1.00 68.44 O
ATOM 4 OP2 U B 13 20.511 -71.579 14.355 1.00 68.95 O
ATOM 5 O5' U B 13 19.825 -70.845 16.674 1.00 67.30 O
ATOM 6 C5' U B 13 20.392 -70.040 17.696 1.00 66.24 C
ATOM 7 C4' U B 13 19.526 -68.837 18.019 1.00 65.73 C
ATOM 8 O4' U B 13 20.180 -67.610 17.597 1.00 65.40 O
ATOM 9 C3' U B 13 18.182 -68.763 17.327 1.00 66.38 C
ATOM 10 O3' U B 13 17.200 -69.546 17.939 1.00 66.50 O
ATOM 11 C2' U B 13 17.857 -67.298 17.406 1.00 65.83 C
ATOM 12 O2' U B 13 17.460 -66.981 18.712 1.00 64.99 O
ATOM 13 C1' U B 13 19.213 -66.687 17.134 1.00 65.51 C
ATOM 14 N1 U B 13 19.428 -66.517 15.702 1.00 66.30 N
ATOM 15 C2 U B 13 18.851 -65.479 15.013 1.00 66.45 C
ATOM 16 O2 U B 13 18.152 -64.691 15.597 1.00 65.92 O
ATOM 17 N3 U B 13 19.147 -65.450 13.660 1.00 67.23 N
ATOM 18 C4 U B 13 19.934 -66.334 12.951 1.00 67.88 C
ATOM 19 O4 U B 13 20.109 -66.178 11.749 1.00 68.57 O
ATOM 20 C5 U B 13 20.496 -67.384 13.734 1.00 67.68 C
ATOM 21 C6 U B 13 20.229 -67.440 15.049 1.00 66.92 C
ATOM 22 P C B 14 15.931 -70.046 17.076 1.00 68.05 P
ATOM 23 OP1 C B 14 14.996 -70.712 18.015 1.00 67.93 O
ATOM 24 OP2 C B 14 16.459 -70.819 15.910 1.00 68.98 O
ATOM 25 O5' C B 14 15.300 -68.688 16.553 1.00 67.96 O
TER
Atoms:
OP1: (23.642,-68.341,10.572)
OP2: (23.800,-66.944,12.736)
C3': (22.805,-70.440,15.765)
C1': (24.983,-71.030,16.387)
C5': (24.008,-69.315,13.997)
O4': (24.832,-71.273,14.984)
C8: (27.172,-69.706,15.884)
O2': (23.456,-70.261,18.114)
C6: (28.779,-69.708,19.024)
C5: (28.035,-69.769,17.842)
C4: (26.859,-70.470,17.911)
P: (24.332,-68.027,11.871)
C4': (23.626,-70.629,14.530)
C2': (23.856,-70.077,16.778)
C2: (27.136,-70.934,20.023)
N1: (28.300,-70.308,20.114)
N3: (26.354,-71.073,18.982)
N6: (29.949,-69.102,19.135)
N7: (28.242,-69.286,16.548)
N9: (26.304,-70.450,16.653)
O5': (24.483,-69.344,12.704)
O3': (22.200,-71.634,16.151)
OP2: (23.800,-66.944,12.736)
C3': (22.805,-70.440,15.765)
C1': (24.983,-71.030,16.387)
C5': (24.008,-69.315,13.997)
O4': (24.832,-71.273,14.984)
C8: (27.172,-69.706,15.884)
O2': (23.456,-70.261,18.114)
C6: (28.779,-69.708,19.024)
C5: (28.035,-69.769,17.842)
C4: (26.859,-70.470,17.911)
P: (24.332,-68.027,11.871)
C4': (23.626,-70.629,14.530)
C2': (23.856,-70.077,16.778)
C2: (27.136,-70.934,20.023)
N1: (28.300,-70.308,20.114)
N3: (26.354,-71.073,18.982)
N6: (29.949,-69.102,19.135)
N7: (28.242,-69.286,16.548)
N9: (26.304,-70.450,16.653)
O5': (24.483,-69.344,12.704)
O3': (22.200,-71.634,16.151)
C4: (19.934,-66.334,12.951)
N3: (19.147,-65.450,13.660)
OP1: (20.411,-73.269,16.275)
OP2: (20.511,-71.579,14.355)
C2: (18.851,-65.479,15.013)
C1': (19.213,-66.687,17.134)
C3': (18.182,-68.763,17.327)
O5': (19.825,-70.845,16.674)
O4': (20.180,-67.610,17.597)
C5': (20.392,-70.040,17.696)
P: (20.679,-71.901,15.800)
C4': (19.526,-68.837,18.019)
C2': (17.857,-67.298,17.406)
O2': (17.460,-66.981,18.712)
N1: (19.428,-66.517,15.702)
O4: (20.109,-66.178,11.749)
O2: (18.152,-64.691,15.597)
C6: (20.229,-67.440,15.049)
C5: (20.496,-67.384,13.734)
O3': (17.200,-69.546,17.939)
N3: (19.147,-65.450,13.660)
OP1: (20.411,-73.269,16.275)
OP2: (20.511,-71.579,14.355)
C2: (18.851,-65.479,15.013)
C1': (19.213,-66.687,17.134)
C3': (18.182,-68.763,17.327)
O5': (19.825,-70.845,16.674)
O4': (20.180,-67.610,17.597)
C5': (20.392,-70.040,17.696)
P: (20.679,-71.901,15.800)
C4': (19.526,-68.837,18.019)
C2': (17.857,-67.298,17.406)
O2': (17.460,-66.981,18.712)
N1: (19.428,-66.517,15.702)
O4: (20.109,-66.178,11.749)
O2: (18.152,-64.691,15.597)
C6: (20.229,-67.440,15.049)
C5: (20.496,-67.384,13.734)
O3': (17.200,-69.546,17.939)
Image (generated by PyMOL):