Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12933:12934
Extra
PDB:
ATOM 1 O3' A A2932 64.986 37.187 1.951 1.00 52.78 O
ATOM 2 P C A2933 64.448 37.518 0.492 1.00 48.64 P
ATOM 3 OP1 C A2933 64.040 36.248 -0.131 1.00 48.54 O
ATOM 4 OP2 C A2933 65.466 38.355 -0.177 1.00 49.15 O
ATOM 5 O5' C A2933 63.168 38.384 0.790 1.00 48.71 O
ATOM 6 C5' C A2933 61.874 37.886 0.532 1.00 48.65 C
ATOM 7 C4' C A2933 60.850 38.987 0.513 1.00 48.93 C
ATOM 8 O4' C A2933 60.811 39.594 -0.794 1.00 49.60 O
ATOM 9 C3' C A2933 59.439 38.541 0.777 1.00 48.69 C
ATOM 10 O3' C A2933 59.159 38.520 2.161 1.00 48.16 O
ATOM 11 C2' C A2933 58.590 39.539 -0.010 1.00 49.25 C
ATOM 12 O2' C A2933 58.373 40.720 0.732 1.00 49.29 O
ATOM 13 C1' C A2933 59.486 39.895 -1.165 1.00 49.81 C
ATOM 14 N1 C A2933 59.127 39.190 -2.454 1.00 50.12 N
ATOM 15 C2 C A2933 59.825 38.073 -2.891 1.00 50.00 C
ATOM 16 O2 C A2933 60.685 37.619 -2.184 1.00 49.61 O
ATOM 17 N3 C A2933 59.616 37.420 -4.025 1.00 50.29 N
ATOM 18 C4 C A2933 58.680 37.844 -4.778 1.00 50.71 C
ATOM 19 N4 C A2933 58.566 37.116 -5.866 1.00 50.98 N
ATOM 20 C5 C A2933 57.902 38.998 -4.436 1.00 50.87 C
ATOM 21 C6 C A2933 58.155 39.648 -3.282 1.00 50.57 C
ATOM 22 P G A2934 58.037 37.561 2.764 1.00 48.83 P
ATOM 23 OP1 G A2934 57.573 38.194 3.985 1.00 48.54 O
ATOM 24 OP2 G A2934 58.605 36.199 2.833 1.00 48.45 O
ATOM 25 O5' G A2934 56.890 37.631 1.688 1.00 49.24 O
TER
ATOM 1 O3' C B2933 59.159 38.520 2.161 1.00 48.16 O
ATOM 2 P G B2934 58.037 37.561 2.764 1.00 48.83 P
ATOM 3 OP1 G B2934 57.573 38.194 3.985 1.00 48.54 O
ATOM 4 OP2 G B2934 58.605 36.199 2.833 1.00 48.45 O
ATOM 5 O5' G B2934 56.890 37.631 1.688 1.00 49.24 O
ATOM 6 C5' G B2934 55.928 38.661 1.803 1.00 49.47 C
ATOM 7 C4' G B2934 54.938 38.670 0.683 1.00 49.91 C
ATOM 8 O4' G B2934 55.593 38.883 -0.586 1.00 50.45 O
ATOM 9 C3' G B2934 54.119 37.416 0.484 1.00 49.66 C
ATOM 10 O3' G B2934 53.092 37.311 1.460 1.00 49.27 O
ATOM 11 C2' G B2934 53.620 37.647 -0.937 1.00 50.28 C
ATOM 12 O2' G B2934 52.638 38.665 -0.960 1.00 50.58 O
ATOM 13 C1' G B2934 54.873 38.217 -1.590 1.00 50.68 C
ATOM 14 N9 G B2934 55.723 37.164 -2.120 1.00 50.60 N
ATOM 15 C8 G B2934 56.754 36.528 -1.475 1.00 50.18 C
ATOM 16 N7 G B2934 57.300 35.595 -2.220 1.00 50.24 N
ATOM 17 C5 G B2934 56.558 35.640 -3.418 1.00 50.74 C
ATOM 18 C6 G B2934 56.666 34.880 -4.619 1.00 51.05 C
ATOM 19 O6 G B2934 57.459 33.998 -4.931 1.00 50.96 O
ATOM 20 N1 G B2934 55.721 35.254 -5.544 1.00 51.53 N
ATOM 21 C2 G B2934 54.793 36.249 -5.318 1.00 51.70 C
ATOM 22 N2 G B2934 53.971 36.467 -6.347 1.00 52.21 N
ATOM 23 N3 G B2934 54.654 36.966 -4.208 1.00 51.42 N
ATOM 24 C4 G B2934 55.581 36.608 -3.334 1.00 50.95 C
ATOM 25 P A B2935 52.399 35.905 1.869 1.00 51.02 P
ATOM 26 OP1 A B2935 51.280 36.252 2.767 1.00 50.79 O
ATOM 27 OP2 A B2935 53.426 34.980 2.365 1.00 50.58 O
ATOM 28 O5' A B2935 51.812 35.382 0.510 1.00 51.42 O
TER
ATOM 2 P C A2933 64.448 37.518 0.492 1.00 48.64 P
ATOM 3 OP1 C A2933 64.040 36.248 -0.131 1.00 48.54 O
ATOM 4 OP2 C A2933 65.466 38.355 -0.177 1.00 49.15 O
ATOM 5 O5' C A2933 63.168 38.384 0.790 1.00 48.71 O
ATOM 6 C5' C A2933 61.874 37.886 0.532 1.00 48.65 C
ATOM 7 C4' C A2933 60.850 38.987 0.513 1.00 48.93 C
ATOM 8 O4' C A2933 60.811 39.594 -0.794 1.00 49.60 O
ATOM 9 C3' C A2933 59.439 38.541 0.777 1.00 48.69 C
ATOM 10 O3' C A2933 59.159 38.520 2.161 1.00 48.16 O
ATOM 11 C2' C A2933 58.590 39.539 -0.010 1.00 49.25 C
ATOM 12 O2' C A2933 58.373 40.720 0.732 1.00 49.29 O
ATOM 13 C1' C A2933 59.486 39.895 -1.165 1.00 49.81 C
ATOM 14 N1 C A2933 59.127 39.190 -2.454 1.00 50.12 N
ATOM 15 C2 C A2933 59.825 38.073 -2.891 1.00 50.00 C
ATOM 16 O2 C A2933 60.685 37.619 -2.184 1.00 49.61 O
ATOM 17 N3 C A2933 59.616 37.420 -4.025 1.00 50.29 N
ATOM 18 C4 C A2933 58.680 37.844 -4.778 1.00 50.71 C
ATOM 19 N4 C A2933 58.566 37.116 -5.866 1.00 50.98 N
ATOM 20 C5 C A2933 57.902 38.998 -4.436 1.00 50.87 C
ATOM 21 C6 C A2933 58.155 39.648 -3.282 1.00 50.57 C
ATOM 22 P G A2934 58.037 37.561 2.764 1.00 48.83 P
ATOM 23 OP1 G A2934 57.573 38.194 3.985 1.00 48.54 O
ATOM 24 OP2 G A2934 58.605 36.199 2.833 1.00 48.45 O
ATOM 25 O5' G A2934 56.890 37.631 1.688 1.00 49.24 O
TER
ATOM 1 O3' C B2933 59.159 38.520 2.161 1.00 48.16 O
ATOM 2 P G B2934 58.037 37.561 2.764 1.00 48.83 P
ATOM 3 OP1 G B2934 57.573 38.194 3.985 1.00 48.54 O
ATOM 4 OP2 G B2934 58.605 36.199 2.833 1.00 48.45 O
ATOM 5 O5' G B2934 56.890 37.631 1.688 1.00 49.24 O
ATOM 6 C5' G B2934 55.928 38.661 1.803 1.00 49.47 C
ATOM 7 C4' G B2934 54.938 38.670 0.683 1.00 49.91 C
ATOM 8 O4' G B2934 55.593 38.883 -0.586 1.00 50.45 O
ATOM 9 C3' G B2934 54.119 37.416 0.484 1.00 49.66 C
ATOM 10 O3' G B2934 53.092 37.311 1.460 1.00 49.27 O
ATOM 11 C2' G B2934 53.620 37.647 -0.937 1.00 50.28 C
ATOM 12 O2' G B2934 52.638 38.665 -0.960 1.00 50.58 O
ATOM 13 C1' G B2934 54.873 38.217 -1.590 1.00 50.68 C
ATOM 14 N9 G B2934 55.723 37.164 -2.120 1.00 50.60 N
ATOM 15 C8 G B2934 56.754 36.528 -1.475 1.00 50.18 C
ATOM 16 N7 G B2934 57.300 35.595 -2.220 1.00 50.24 N
ATOM 17 C5 G B2934 56.558 35.640 -3.418 1.00 50.74 C
ATOM 18 C6 G B2934 56.666 34.880 -4.619 1.00 51.05 C
ATOM 19 O6 G B2934 57.459 33.998 -4.931 1.00 50.96 O
ATOM 20 N1 G B2934 55.721 35.254 -5.544 1.00 51.53 N
ATOM 21 C2 G B2934 54.793 36.249 -5.318 1.00 51.70 C
ATOM 22 N2 G B2934 53.971 36.467 -6.347 1.00 52.21 N
ATOM 23 N3 G B2934 54.654 36.966 -4.208 1.00 51.42 N
ATOM 24 C4 G B2934 55.581 36.608 -3.334 1.00 50.95 C
ATOM 25 P A B2935 52.399 35.905 1.869 1.00 51.02 P
ATOM 26 OP1 A B2935 51.280 36.252 2.767 1.00 50.79 O
ATOM 27 OP2 A B2935 53.426 34.980 2.365 1.00 50.58 O
ATOM 28 O5' A B2935 51.812 35.382 0.510 1.00 51.42 O
TER
Atoms:
C2: (59.825,38.073,-2.891)
OP1: (64.040,36.248,-0.131)
OP2: (65.466,38.355,-0.177)
C4: (58.680,37.844,-4.778)
O5': (63.168,38.384,0.790)
C3': (59.439,38.541,0.777)
C1': (59.486,39.895,-1.165)
O4': (60.811,39.594,-0.794)
C5': (61.874,37.886,0.532)
P: (64.448,37.518,0.492)
O2: (60.685,37.619,-2.184)
C4': (60.850,38.987,0.513)
C2': (58.590,39.539,-0.010)
O2': (58.373,40.720,0.732)
N1: (59.127,39.190,-2.454)
N3: (59.616,37.420,-4.025)
N4: (58.566,37.116,-5.866)
C6: (58.155,39.648,-3.282)
C5: (57.902,38.998,-4.436)
O3': (59.159,38.520,2.161)
OP1: (64.040,36.248,-0.131)
OP2: (65.466,38.355,-0.177)
C4: (58.680,37.844,-4.778)
O5': (63.168,38.384,0.790)
C3': (59.439,38.541,0.777)
C1': (59.486,39.895,-1.165)
O4': (60.811,39.594,-0.794)
C5': (61.874,37.886,0.532)
P: (64.448,37.518,0.492)
O2: (60.685,37.619,-2.184)
C4': (60.850,38.987,0.513)
C2': (58.590,39.539,-0.010)
O2': (58.373,40.720,0.732)
N1: (59.127,39.190,-2.454)
N3: (59.616,37.420,-4.025)
N4: (58.566,37.116,-5.866)
C6: (58.155,39.648,-3.282)
C5: (57.902,38.998,-4.436)
O3': (59.159,38.520,2.161)
OP1: (57.573,38.194,3.985)
OP2: (58.605,36.199,2.833)
C3': (54.119,37.416,0.484)
C1': (54.873,38.217,-1.590)
C5': (55.928,38.661,1.803)
O6: (57.459,33.998,-4.931)
O4': (55.593,38.883,-0.586)
C8: (56.754,36.528,-1.475)
C2: (54.793,36.249,-5.318)
C6: (56.666,34.880,-4.619)
C5: (56.558,35.640,-3.418)
C4: (55.581,36.608,-3.334)
P: (58.037,37.561,2.764)
C4': (54.938,38.670,0.683)
C2': (53.620,37.647,-0.937)
O2': (52.638,38.665,-0.960)
N1: (55.721,35.254,-5.544)
N2: (53.971,36.467,-6.347)
N3: (54.654,36.966,-4.208)
N7: (57.300,35.595,-2.220)
N9: (55.723,37.164,-2.120)
O5': (56.890,37.631,1.688)
O3': (53.092,37.311,1.460)
OP2: (58.605,36.199,2.833)
C3': (54.119,37.416,0.484)
C1': (54.873,38.217,-1.590)
C5': (55.928,38.661,1.803)
O6: (57.459,33.998,-4.931)
O4': (55.593,38.883,-0.586)
C8: (56.754,36.528,-1.475)
C2: (54.793,36.249,-5.318)
C6: (56.666,34.880,-4.619)
C5: (56.558,35.640,-3.418)
C4: (55.581,36.608,-3.334)
P: (58.037,37.561,2.764)
C4': (54.938,38.670,0.683)
C2': (53.620,37.647,-0.937)
O2': (52.638,38.665,-0.960)
N1: (55.721,35.254,-5.544)
N2: (53.971,36.467,-6.347)
N3: (54.654,36.966,-4.208)
N7: (57.300,35.595,-2.220)
N9: (55.723,37.164,-2.120)
O5': (56.890,37.631,1.688)
O3': (53.092,37.311,1.460)
Image (generated by PyMOL):