Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2V:A20:A18
Extra
PDB:
ATOM 1 O3' C A 19 -11.927 36.570 -25.999 1.00 36.26 O
ATOM 2 P A A 20 -12.020 35.217 -26.858 1.00 42.80 P
ATOM 3 OP1 A A 20 -12.481 34.133 -25.960 1.00 47.39 O
ATOM 4 OP2 A A 20 -10.759 35.063 -27.615 1.00 42.55 O
ATOM 5 O5' A A 20 -13.197 35.525 -27.895 1.00 44.07 O
ATOM 6 C5' A A 20 -14.470 35.925 -27.414 1.00 43.43 C
ATOM 7 C4' A A 20 -15.224 36.667 -28.500 1.00 43.03 C
ATOM 8 O4' A A 20 -14.445 37.801 -28.947 1.00 36.95 O
ATOM 9 C3' A A 20 -15.450 35.871 -29.773 1.00 41.39 C
ATOM 10 O3' A A 20 -16.572 35.017 -29.626 1.00 45.22 O
ATOM 11 C2' A A 20 -15.747 36.996 -30.754 1.00 40.82 C
ATOM 12 O2' A A 20 -17.067 37.472 -30.613 1.00 43.87 O
ATOM 13 C1' A A 20 -14.777 38.080 -30.294 1.00 38.74 C
ATOM 14 N9 A A 20 -13.563 38.155 -31.102 1.00 36.98 N
ATOM 15 C8 A A 20 -12.272 37.974 -30.692 1.00 38.02 C
ATOM 16 N7 A A 20 -11.390 38.109 -31.655 1.00 37.93 N
ATOM 17 C5 A A 20 -12.155 38.400 -32.773 1.00 37.59 C
ATOM 18 C6 A A 20 -11.822 38.658 -34.120 1.00 39.65 C
ATOM 19 N6 A A 20 -10.567 38.661 -34.583 1.00 37.22 N
ATOM 20 N1 A A 20 -12.832 38.912 -34.977 1.00 37.03 N
ATOM 21 C2 A A 20 -14.088 38.908 -34.516 1.00 37.86 C
ATOM 22 N3 A A 20 -14.525 38.682 -33.278 1.00 38.45 N
ATOM 23 C4 A A 20 -13.498 38.432 -32.448 1.00 39.92 C
ATOM 24 P C A 21 -16.433 33.461 -29.959 1.00 43.12 P
ATOM 25 OP1 C A 21 -17.781 32.859 -29.854 1.00 53.85 O
ATOM 26 OP2 C A 21 -15.314 32.927 -29.149 1.00 42.82 O
ATOM 27 O5' C A 21 -16.000 33.448 -31.501 1.00 41.54 O
TER
ATOM 1 O3' U B 17 -4.917 42.763 -30.053 1.00 44.15 O
ATOM 2 P U B 18 -3.813 42.292 -28.994 1.00 43.08 P
ATOM 3 OP1 U B 18 -3.653 43.392 -28.016 1.00 43.64 O
ATOM 4 OP2 U B 18 -2.637 41.804 -29.752 1.00 36.44 O
ATOM 5 O5' U B 18 -4.500 41.052 -28.245 1.00 42.76 O
ATOM 6 C5' U B 18 -5.235 41.249 -27.035 1.00 41.59 C
ATOM 7 C4' U B 18 -6.054 40.028 -26.636 1.00 40.50 C
ATOM 8 O4' U B 18 -7.004 39.719 -27.687 1.00 38.34 O
ATOM 9 C3' U B 18 -5.288 38.726 -26.432 1.00 39.29 C
ATOM 10 O3' U B 18 -6.064 37.799 -25.674 1.00 41.61 O
ATOM 11 C2' U B 18 -5.230 38.226 -27.865 1.00 42.09 C
ATOM 12 O2' U B 18 -4.903 36.855 -27.939 1.00 37.07 O
ATOM 13 C1' U B 18 -6.696 38.440 -28.211 1.00 39.14 C
ATOM 14 N1 U B 18 -7.024 38.452 -29.660 1.00 36.03 N
ATOM 15 C2 U B 18 -8.259 37.983 -30.047 1.00 33.73 C
ATOM 16 O2 U B 18 -9.081 37.557 -29.256 1.00 34.78 O
ATOM 17 N3 U B 18 -8.498 38.031 -31.395 1.00 35.76 N
ATOM 18 C4 U B 18 -7.637 38.495 -32.372 1.00 37.26 C
ATOM 19 O4 U B 18 -7.990 38.475 -33.547 1.00 36.48 O
ATOM 20 C5 U B 18 -6.365 38.970 -31.888 1.00 39.83 C
ATOM 21 C6 U B 18 -6.111 38.932 -30.575 1.00 35.82 C
ATOM 22 P C B 19 -6.763 38.169 -24.280 1.00 42.42 P
ATOM 23 OP1 C B 19 -5.998 39.270 -23.650 1.00 45.16 O
ATOM 24 OP2 C B 19 -6.974 36.905 -23.543 1.00 40.19 O
ATOM 25 O5' C B 19 -8.194 38.737 -24.725 1.00 43.95 O
TER
ATOM 2 P A A 20 -12.020 35.217 -26.858 1.00 42.80 P
ATOM 3 OP1 A A 20 -12.481 34.133 -25.960 1.00 47.39 O
ATOM 4 OP2 A A 20 -10.759 35.063 -27.615 1.00 42.55 O
ATOM 5 O5' A A 20 -13.197 35.525 -27.895 1.00 44.07 O
ATOM 6 C5' A A 20 -14.470 35.925 -27.414 1.00 43.43 C
ATOM 7 C4' A A 20 -15.224 36.667 -28.500 1.00 43.03 C
ATOM 8 O4' A A 20 -14.445 37.801 -28.947 1.00 36.95 O
ATOM 9 C3' A A 20 -15.450 35.871 -29.773 1.00 41.39 C
ATOM 10 O3' A A 20 -16.572 35.017 -29.626 1.00 45.22 O
ATOM 11 C2' A A 20 -15.747 36.996 -30.754 1.00 40.82 C
ATOM 12 O2' A A 20 -17.067 37.472 -30.613 1.00 43.87 O
ATOM 13 C1' A A 20 -14.777 38.080 -30.294 1.00 38.74 C
ATOM 14 N9 A A 20 -13.563 38.155 -31.102 1.00 36.98 N
ATOM 15 C8 A A 20 -12.272 37.974 -30.692 1.00 38.02 C
ATOM 16 N7 A A 20 -11.390 38.109 -31.655 1.00 37.93 N
ATOM 17 C5 A A 20 -12.155 38.400 -32.773 1.00 37.59 C
ATOM 18 C6 A A 20 -11.822 38.658 -34.120 1.00 39.65 C
ATOM 19 N6 A A 20 -10.567 38.661 -34.583 1.00 37.22 N
ATOM 20 N1 A A 20 -12.832 38.912 -34.977 1.00 37.03 N
ATOM 21 C2 A A 20 -14.088 38.908 -34.516 1.00 37.86 C
ATOM 22 N3 A A 20 -14.525 38.682 -33.278 1.00 38.45 N
ATOM 23 C4 A A 20 -13.498 38.432 -32.448 1.00 39.92 C
ATOM 24 P C A 21 -16.433 33.461 -29.959 1.00 43.12 P
ATOM 25 OP1 C A 21 -17.781 32.859 -29.854 1.00 53.85 O
ATOM 26 OP2 C A 21 -15.314 32.927 -29.149 1.00 42.82 O
ATOM 27 O5' C A 21 -16.000 33.448 -31.501 1.00 41.54 O
TER
ATOM 1 O3' U B 17 -4.917 42.763 -30.053 1.00 44.15 O
ATOM 2 P U B 18 -3.813 42.292 -28.994 1.00 43.08 P
ATOM 3 OP1 U B 18 -3.653 43.392 -28.016 1.00 43.64 O
ATOM 4 OP2 U B 18 -2.637 41.804 -29.752 1.00 36.44 O
ATOM 5 O5' U B 18 -4.500 41.052 -28.245 1.00 42.76 O
ATOM 6 C5' U B 18 -5.235 41.249 -27.035 1.00 41.59 C
ATOM 7 C4' U B 18 -6.054 40.028 -26.636 1.00 40.50 C
ATOM 8 O4' U B 18 -7.004 39.719 -27.687 1.00 38.34 O
ATOM 9 C3' U B 18 -5.288 38.726 -26.432 1.00 39.29 C
ATOM 10 O3' U B 18 -6.064 37.799 -25.674 1.00 41.61 O
ATOM 11 C2' U B 18 -5.230 38.226 -27.865 1.00 42.09 C
ATOM 12 O2' U B 18 -4.903 36.855 -27.939 1.00 37.07 O
ATOM 13 C1' U B 18 -6.696 38.440 -28.211 1.00 39.14 C
ATOM 14 N1 U B 18 -7.024 38.452 -29.660 1.00 36.03 N
ATOM 15 C2 U B 18 -8.259 37.983 -30.047 1.00 33.73 C
ATOM 16 O2 U B 18 -9.081 37.557 -29.256 1.00 34.78 O
ATOM 17 N3 U B 18 -8.498 38.031 -31.395 1.00 35.76 N
ATOM 18 C4 U B 18 -7.637 38.495 -32.372 1.00 37.26 C
ATOM 19 O4 U B 18 -7.990 38.475 -33.547 1.00 36.48 O
ATOM 20 C5 U B 18 -6.365 38.970 -31.888 1.00 39.83 C
ATOM 21 C6 U B 18 -6.111 38.932 -30.575 1.00 35.82 C
ATOM 22 P C B 19 -6.763 38.169 -24.280 1.00 42.42 P
ATOM 23 OP1 C B 19 -5.998 39.270 -23.650 1.00 45.16 O
ATOM 24 OP2 C B 19 -6.974 36.905 -23.543 1.00 40.19 O
ATOM 25 O5' C B 19 -8.194 38.737 -24.725 1.00 43.95 O
TER
Atoms:
OP1: (-12.481,34.133,-25.960)
OP2: (-10.759,35.063,-27.615)
C3': (-15.450,35.871,-29.773)
C1': (-14.777,38.080,-30.294)
C5': (-14.470,35.925,-27.414)
O4': (-14.445,37.801,-28.947)
C8: (-12.272,37.974,-30.692)
O2': (-17.067,37.472,-30.613)
C6: (-11.822,38.658,-34.120)
C5: (-12.155,38.400,-32.773)
C4: (-13.498,38.432,-32.448)
P: (-12.020,35.217,-26.858)
C4': (-15.224,36.667,-28.500)
C2': (-15.747,36.996,-30.754)
C2: (-14.088,38.908,-34.516)
N1: (-12.832,38.912,-34.977)
N3: (-14.525,38.682,-33.278)
N6: (-10.567,38.661,-34.583)
N7: (-11.390,38.109,-31.655)
N9: (-13.563,38.155,-31.102)
O5': (-13.197,35.525,-27.895)
O3': (-16.572,35.017,-29.626)
OP2: (-10.759,35.063,-27.615)
C3': (-15.450,35.871,-29.773)
C1': (-14.777,38.080,-30.294)
C5': (-14.470,35.925,-27.414)
O4': (-14.445,37.801,-28.947)
C8: (-12.272,37.974,-30.692)
O2': (-17.067,37.472,-30.613)
C6: (-11.822,38.658,-34.120)
C5: (-12.155,38.400,-32.773)
C4: (-13.498,38.432,-32.448)
P: (-12.020,35.217,-26.858)
C4': (-15.224,36.667,-28.500)
C2': (-15.747,36.996,-30.754)
C2: (-14.088,38.908,-34.516)
N1: (-12.832,38.912,-34.977)
N3: (-14.525,38.682,-33.278)
N6: (-10.567,38.661,-34.583)
N7: (-11.390,38.109,-31.655)
N9: (-13.563,38.155,-31.102)
O5': (-13.197,35.525,-27.895)
O3': (-16.572,35.017,-29.626)
C4: (-7.637,38.495,-32.372)
N3: (-8.498,38.031,-31.395)
OP1: (-3.653,43.392,-28.016)
OP2: (-2.637,41.804,-29.752)
C2: (-8.259,37.983,-30.047)
C1': (-6.696,38.440,-28.211)
C3': (-5.288,38.726,-26.432)
O5': (-4.500,41.052,-28.245)
O4': (-7.004,39.719,-27.687)
C5': (-5.235,41.249,-27.035)
P: (-3.813,42.292,-28.994)
C4': (-6.054,40.028,-26.636)
C2': (-5.230,38.226,-27.865)
O2': (-4.903,36.855,-27.939)
N1: (-7.024,38.452,-29.660)
O4: (-7.990,38.475,-33.547)
O2: (-9.081,37.557,-29.256)
C6: (-6.111,38.932,-30.575)
C5: (-6.365,38.970,-31.888)
O3': (-6.064,37.799,-25.674)
N3: (-8.498,38.031,-31.395)
OP1: (-3.653,43.392,-28.016)
OP2: (-2.637,41.804,-29.752)
C2: (-8.259,37.983,-30.047)
C1': (-6.696,38.440,-28.211)
C3': (-5.288,38.726,-26.432)
O5': (-4.500,41.052,-28.245)
O4': (-7.004,39.719,-27.687)
C5': (-5.235,41.249,-27.035)
P: (-3.813,42.292,-28.994)
C4': (-6.054,40.028,-26.636)
C2': (-5.230,38.226,-27.865)
O2': (-4.903,36.855,-27.939)
N1: (-7.024,38.452,-29.660)
O4: (-7.990,38.475,-33.547)
O2: (-9.081,37.557,-29.256)
C6: (-6.111,38.932,-30.575)
C5: (-6.365,38.970,-31.888)
O3': (-6.064,37.799,-25.674)
Image (generated by PyMOL):