Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1AQ4:S12:S4
Extra
PDB:
ATOM 1 O3' C A 11 -7.140 93.572 4.576 0.60 58.75 O
ATOM 2 P C A 12 -5.715 92.927 4.103 0.60 61.88 P
ATOM 3 OP1 C A 12 -5.767 91.425 4.278 0.60 61.69 O
ATOM 4 OP2 C A 12 -4.598 93.713 4.779 0.60 61.91 O
ATOM 5 O5' C A 12 -5.609 93.261 2.533 0.60 62.02 O
ATOM 6 C5' C A 12 -6.575 92.723 1.590 0.60 62.48 C
ATOM 7 C4' C A 12 -6.164 93.064 0.171 0.60 62.53 C
ATOM 8 O4' C A 12 -6.019 94.498 0.063 0.60 60.29 O
ATOM 9 C3' C A 12 -4.793 92.546 -0.241 0.60 63.62 C
ATOM 10 O3' C A 12 -4.856 91.222 -0.711 0.60 67.81 O
ATOM 11 C2' C A 12 -4.333 93.500 -1.327 0.60 61.15 C
ATOM 12 O2' C A 12 -4.830 93.150 -2.612 0.60 61.82 O
ATOM 13 C1' C A 12 -4.950 94.806 -0.832 0.60 57.95 C
ATOM 14 N1 C A 12 -3.979 95.653 -0.136 0.60 52.96 N
ATOM 15 C2 C A 12 -2.941 96.225 -0.891 0.60 51.33 C
ATOM 16 O2 C A 12 -2.910 96.028 -2.126 0.60 50.85 O
ATOM 17 N3 C A 12 -1.997 96.974 -0.265 0.60 49.43 N
ATOM 18 C4 C A 12 -2.060 97.141 1.057 0.60 48.73 C
ATOM 19 N4 C A 12 -1.048 97.784 1.648 0.60 49.48 N
ATOM 20 C5 C A 12 -3.143 96.617 1.842 0.60 49.48 C
ATOM 21 C6 C A 12 -4.069 95.878 1.208 0.60 51.28 C
ATOM 22 P A A 13 -3.623 90.238 -0.387 0.60 70.89 P
ATOM 23 OP1 A A 13 -4.192 88.831 -0.399 0.60 70.96 O
ATOM 24 OP2 A A 13 -2.909 90.763 0.863 0.60 70.91 O
ATOM 25 O5' A A 13 -2.627 90.448 -1.617 0.60 68.41 O
TER
ATOM 1 O3' A B 3 -1.893 103.687 -10.476 0.60 43.34 O
ATOM 2 P G B 4 -1.431 102.185 -10.097 0.60 44.44 P
ATOM 3 OP1 G B 4 -0.083 101.908 -10.703 0.60 45.75 O
ATOM 4 OP2 G B 4 -2.605 101.317 -10.467 0.60 45.04 O
ATOM 5 O5' G B 4 -1.274 102.214 -8.506 0.60 43.67 O
ATOM 6 C5' G B 4 -2.384 102.590 -7.671 0.60 42.76 C
ATOM 7 C4' G B 4 -3.260 101.385 -7.401 0.60 42.23 C
ATOM 8 O4' G B 4 -2.547 100.425 -6.567 0.60 42.47 O
ATOM 9 C3' G B 4 -4.539 101.687 -6.639 0.60 42.46 C
ATOM 10 O3' G B 4 -5.565 102.098 -7.543 0.60 40.92 O
ATOM 11 C2' G B 4 -4.857 100.361 -5.947 0.60 42.45 C
ATOM 12 O2' G B 4 -5.588 99.487 -6.791 0.60 45.55 O
ATOM 13 C1' G B 4 -3.447 99.816 -5.645 0.60 41.40 C
ATOM 14 N9 G B 4 -2.997 100.157 -4.297 0.60 38.24 N
ATOM 15 C8 G B 4 -1.925 100.959 -3.952 0.60 37.58 C
ATOM 16 N7 G B 4 -1.819 101.150 -2.663 0.60 36.56 N
ATOM 17 C5 G B 4 -2.869 100.422 -2.129 0.60 34.74 C
ATOM 18 C6 G B 4 -3.278 100.271 -0.782 0.60 35.26 C
ATOM 19 O6 G B 4 -2.787 100.783 0.240 0.60 33.24 O
ATOM 20 N1 G B 4 -4.392 99.437 -0.683 0.60 33.76 N
ATOM 21 C2 G B 4 -5.030 98.845 -1.746 0.60 35.80 C
ATOM 22 N2 G B 4 -6.102 98.096 -1.441 0.60 36.00 N
ATOM 23 N3 G B 4 -4.657 98.979 -3.006 0.60 34.76 N
ATOM 24 C4 G B 4 -3.586 99.778 -3.118 0.60 35.26 C
ATOM 25 P G B 5 -6.571 103.270 -7.113 0.60 38.69 P
ATOM 26 OP1 G B 5 -7.243 103.821 -8.337 0.60 38.90 O
ATOM 27 OP2 G B 5 -5.779 104.190 -6.232 0.60 38.80 O
ATOM 28 O5' G B 5 -7.620 102.560 -6.144 0.60 35.75 O
TER
ATOM 2 P C A 12 -5.715 92.927 4.103 0.60 61.88 P
ATOM 3 OP1 C A 12 -5.767 91.425 4.278 0.60 61.69 O
ATOM 4 OP2 C A 12 -4.598 93.713 4.779 0.60 61.91 O
ATOM 5 O5' C A 12 -5.609 93.261 2.533 0.60 62.02 O
ATOM 6 C5' C A 12 -6.575 92.723 1.590 0.60 62.48 C
ATOM 7 C4' C A 12 -6.164 93.064 0.171 0.60 62.53 C
ATOM 8 O4' C A 12 -6.019 94.498 0.063 0.60 60.29 O
ATOM 9 C3' C A 12 -4.793 92.546 -0.241 0.60 63.62 C
ATOM 10 O3' C A 12 -4.856 91.222 -0.711 0.60 67.81 O
ATOM 11 C2' C A 12 -4.333 93.500 -1.327 0.60 61.15 C
ATOM 12 O2' C A 12 -4.830 93.150 -2.612 0.60 61.82 O
ATOM 13 C1' C A 12 -4.950 94.806 -0.832 0.60 57.95 C
ATOM 14 N1 C A 12 -3.979 95.653 -0.136 0.60 52.96 N
ATOM 15 C2 C A 12 -2.941 96.225 -0.891 0.60 51.33 C
ATOM 16 O2 C A 12 -2.910 96.028 -2.126 0.60 50.85 O
ATOM 17 N3 C A 12 -1.997 96.974 -0.265 0.60 49.43 N
ATOM 18 C4 C A 12 -2.060 97.141 1.057 0.60 48.73 C
ATOM 19 N4 C A 12 -1.048 97.784 1.648 0.60 49.48 N
ATOM 20 C5 C A 12 -3.143 96.617 1.842 0.60 49.48 C
ATOM 21 C6 C A 12 -4.069 95.878 1.208 0.60 51.28 C
ATOM 22 P A A 13 -3.623 90.238 -0.387 0.60 70.89 P
ATOM 23 OP1 A A 13 -4.192 88.831 -0.399 0.60 70.96 O
ATOM 24 OP2 A A 13 -2.909 90.763 0.863 0.60 70.91 O
ATOM 25 O5' A A 13 -2.627 90.448 -1.617 0.60 68.41 O
TER
ATOM 1 O3' A B 3 -1.893 103.687 -10.476 0.60 43.34 O
ATOM 2 P G B 4 -1.431 102.185 -10.097 0.60 44.44 P
ATOM 3 OP1 G B 4 -0.083 101.908 -10.703 0.60 45.75 O
ATOM 4 OP2 G B 4 -2.605 101.317 -10.467 0.60 45.04 O
ATOM 5 O5' G B 4 -1.274 102.214 -8.506 0.60 43.67 O
ATOM 6 C5' G B 4 -2.384 102.590 -7.671 0.60 42.76 C
ATOM 7 C4' G B 4 -3.260 101.385 -7.401 0.60 42.23 C
ATOM 8 O4' G B 4 -2.547 100.425 -6.567 0.60 42.47 O
ATOM 9 C3' G B 4 -4.539 101.687 -6.639 0.60 42.46 C
ATOM 10 O3' G B 4 -5.565 102.098 -7.543 0.60 40.92 O
ATOM 11 C2' G B 4 -4.857 100.361 -5.947 0.60 42.45 C
ATOM 12 O2' G B 4 -5.588 99.487 -6.791 0.60 45.55 O
ATOM 13 C1' G B 4 -3.447 99.816 -5.645 0.60 41.40 C
ATOM 14 N9 G B 4 -2.997 100.157 -4.297 0.60 38.24 N
ATOM 15 C8 G B 4 -1.925 100.959 -3.952 0.60 37.58 C
ATOM 16 N7 G B 4 -1.819 101.150 -2.663 0.60 36.56 N
ATOM 17 C5 G B 4 -2.869 100.422 -2.129 0.60 34.74 C
ATOM 18 C6 G B 4 -3.278 100.271 -0.782 0.60 35.26 C
ATOM 19 O6 G B 4 -2.787 100.783 0.240 0.60 33.24 O
ATOM 20 N1 G B 4 -4.392 99.437 -0.683 0.60 33.76 N
ATOM 21 C2 G B 4 -5.030 98.845 -1.746 0.60 35.80 C
ATOM 22 N2 G B 4 -6.102 98.096 -1.441 0.60 36.00 N
ATOM 23 N3 G B 4 -4.657 98.979 -3.006 0.60 34.76 N
ATOM 24 C4 G B 4 -3.586 99.778 -3.118 0.60 35.26 C
ATOM 25 P G B 5 -6.571 103.270 -7.113 0.60 38.69 P
ATOM 26 OP1 G B 5 -7.243 103.821 -8.337 0.60 38.90 O
ATOM 27 OP2 G B 5 -5.779 104.190 -6.232 0.60 38.80 O
ATOM 28 O5' G B 5 -7.620 102.560 -6.144 0.60 35.75 O
TER
Atoms:
C2: (-2.941,96.225,-0.891)
OP1: (-5.767,91.425,4.278)
OP2: (-4.598,93.713,4.779)
C4: (-2.060,97.141,1.057)
O5': (-5.609,93.261,2.533)
C3': (-4.793,92.546,-0.241)
C1': (-4.950,94.806,-0.832)
O4': (-6.019,94.498,0.063)
C5': (-6.575,92.723,1.590)
P: (-5.715,92.927,4.103)
O2: (-2.910,96.028,-2.126)
C4': (-6.164,93.064,0.171)
C2': (-4.333,93.500,-1.327)
O2': (-4.830,93.150,-2.612)
N1: (-3.979,95.653,-0.136)
N3: (-1.997,96.974,-0.265)
N4: (-1.048,97.784,1.648)
C6: (-4.069,95.878,1.208)
C5: (-3.143,96.617,1.842)
O3': (-4.856,91.222,-0.711)
OP1: (-5.767,91.425,4.278)
OP2: (-4.598,93.713,4.779)
C4: (-2.060,97.141,1.057)
O5': (-5.609,93.261,2.533)
C3': (-4.793,92.546,-0.241)
C1': (-4.950,94.806,-0.832)
O4': (-6.019,94.498,0.063)
C5': (-6.575,92.723,1.590)
P: (-5.715,92.927,4.103)
O2: (-2.910,96.028,-2.126)
C4': (-6.164,93.064,0.171)
C2': (-4.333,93.500,-1.327)
O2': (-4.830,93.150,-2.612)
N1: (-3.979,95.653,-0.136)
N3: (-1.997,96.974,-0.265)
N4: (-1.048,97.784,1.648)
C6: (-4.069,95.878,1.208)
C5: (-3.143,96.617,1.842)
O3': (-4.856,91.222,-0.711)
OP1: (-0.083,101.908,-10.703)
OP2: (-2.605,101.317,-10.467)
C3': (-4.539,101.687,-6.639)
C1': (-3.447,99.816,-5.645)
C5': (-2.384,102.590,-7.671)
O6: (-2.787,100.783,0.240)
O4': (-2.547,100.425,-6.567)
C8: (-1.925,100.959,-3.952)
C2: (-5.030,98.845,-1.746)
C6: (-3.278,100.271,-0.782)
C5: (-2.869,100.422,-2.129)
C4: (-3.586,99.778,-3.118)
P: (-1.431,102.185,-10.097)
C4': (-3.260,101.385,-7.401)
C2': (-4.857,100.361,-5.947)
O2': (-5.588,99.487,-6.791)
N1: (-4.392,99.437,-0.683)
N2: (-6.102,98.096,-1.441)
N3: (-4.657,98.979,-3.006)
N7: (-1.819,101.150,-2.663)
N9: (-2.997,100.157,-4.297)
O5': (-1.274,102.214,-8.506)
O3': (-5.565,102.098,-7.543)
OP2: (-2.605,101.317,-10.467)
C3': (-4.539,101.687,-6.639)
C1': (-3.447,99.816,-5.645)
C5': (-2.384,102.590,-7.671)
O6: (-2.787,100.783,0.240)
O4': (-2.547,100.425,-6.567)
C8: (-1.925,100.959,-3.952)
C2: (-5.030,98.845,-1.746)
C6: (-3.278,100.271,-0.782)
C5: (-2.869,100.422,-2.129)
C4: (-3.586,99.778,-3.118)
P: (-1.431,102.185,-10.097)
C4': (-3.260,101.385,-7.401)
C2': (-4.857,100.361,-5.947)
O2': (-5.588,99.487,-6.791)
N1: (-4.392,99.437,-0.683)
N2: (-6.102,98.096,-1.441)
N3: (-4.657,98.979,-3.006)
N7: (-1.819,101.150,-2.663)
N9: (-2.997,100.157,-4.297)
O5': (-1.274,102.214,-8.506)
O3': (-5.565,102.098,-7.543)
Image (generated by PyMOL):