Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K9M:A1237:A1236
Extra
PDB:
ATOM 1 O3' C A1236 10.458 87.067 58.970 1.00 63.25 O
ATOM 2 P A A1237 10.439 87.038 60.565 1.00 63.90 P
ATOM 3 OP1 A A1237 11.635 86.290 61.028 1.00 63.66 O
ATOM 4 OP2 A A1237 9.084 86.607 61.001 1.00 64.38 O
ATOM 5 O5' A A1237 10.662 88.560 60.963 1.00 66.88 O
ATOM 6 C5' A A1237 11.950 89.170 60.789 1.00 71.27 C
ATOM 7 C4' A A1237 11.894 90.609 61.209 1.00 73.84 C
ATOM 8 O4' A A1237 10.983 91.305 60.325 1.00 73.06 O
ATOM 9 C3' A A1237 11.324 90.833 62.599 1.00 76.78 C
ATOM 10 O3' A A1237 12.337 90.680 63.586 1.00 83.14 O
ATOM 11 C2' A A1237 10.784 92.254 62.497 1.00 75.36 C
ATOM 12 O2' A A1237 11.796 93.233 62.599 1.00 75.64 O
ATOM 13 C1' A A1237 10.257 92.268 61.058 1.00 72.88 C
ATOM 14 N9 A A1237 8.832 91.964 60.929 1.00 70.34 N
ATOM 15 C8 A A1237 8.194 90.746 60.936 1.00 69.42 C
ATOM 16 N7 A A1237 6.890 90.832 60.838 1.00 68.10 N
ATOM 17 C5 A A1237 6.654 92.198 60.755 1.00 69.56 C
ATOM 18 C6 A A1237 5.467 92.955 60.655 1.00 69.98 C
ATOM 19 N6 A A1237 4.246 92.417 60.647 1.00 70.30 N
ATOM 20 N1 A A1237 5.584 94.302 60.576 1.00 69.62 N
ATOM 21 C2 A A1237 6.813 94.840 60.612 1.00 68.92 C
ATOM 22 N3 A A1237 7.995 94.237 60.720 1.00 69.53 N
ATOM 23 C4 A A1237 7.843 92.903 60.789 1.00 69.60 C
ATOM 24 P U A1238 11.976 90.050 65.022 1.00 88.84 P
ATOM 25 OP1 U A1238 12.101 88.563 64.890 1.00 87.33 O
ATOM 26 OP2 U A1238 10.687 90.643 65.467 1.00 88.76 O
ATOM 27 O5' U A1238 13.152 90.589 65.967 1.00 93.39 O
TER
ATOM 1 O3' U B1235 4.725 86.300 59.210 1.00 61.82 O
ATOM 2 P C B1236 5.571 85.548 58.075 1.00 62.64 P
ATOM 3 OP1 C B1236 4.766 85.599 56.826 1.00 62.45 O
ATOM 4 OP2 C B1236 5.981 84.227 58.623 1.00 62.94 O
ATOM 5 O5' C B1236 6.863 86.465 57.883 1.00 62.19 O
ATOM 6 C5' C B1236 8.033 85.973 57.169 1.00 61.22 C
ATOM 7 C4' C B1236 9.055 87.080 56.999 1.00 61.21 C
ATOM 8 O4' C B1236 8.499 88.139 56.180 1.00 59.92 O
ATOM 9 C3' C B1236 9.456 87.790 58.279 1.00 61.27 C
ATOM 10 O3' C B1236 10.458 87.067 58.970 1.00 63.25 O
ATOM 11 C2' C B1236 9.973 89.128 57.772 1.00 60.47 C
ATOM 12 O2' C B1236 11.309 89.076 57.308 1.00 60.43 O
ATOM 13 C1' C B1236 9.022 89.391 56.600 1.00 58.81 C
ATOM 14 N1 C B1236 7.898 90.299 56.908 1.00 56.84 N
ATOM 15 C2 C B1236 8.121 91.687 56.880 1.00 56.50 C
ATOM 16 O2 C B1236 9.254 92.118 56.617 1.00 57.01 O
ATOM 17 N3 C B1236 7.097 92.526 57.135 1.00 56.58 N
ATOM 18 C4 C B1236 5.889 92.038 57.412 1.00 56.36 C
ATOM 19 N4 C B1236 4.906 92.910 57.641 1.00 57.15 N
ATOM 20 C5 C B1236 5.633 90.636 57.460 1.00 55.89 C
ATOM 21 C6 C B1236 6.656 89.810 57.204 1.00 55.98 C
ATOM 22 P A B1237 10.439 87.038 60.565 1.00 63.90 P
ATOM 23 OP1 A B1237 11.635 86.290 61.028 1.00 63.66 O
ATOM 24 OP2 A B1237 9.084 86.607 61.001 1.00 64.38 O
ATOM 25 O5' A B1237 10.662 88.560 60.963 1.00 66.88 O
TER
ATOM 2 P A A1237 10.439 87.038 60.565 1.00 63.90 P
ATOM 3 OP1 A A1237 11.635 86.290 61.028 1.00 63.66 O
ATOM 4 OP2 A A1237 9.084 86.607 61.001 1.00 64.38 O
ATOM 5 O5' A A1237 10.662 88.560 60.963 1.00 66.88 O
ATOM 6 C5' A A1237 11.950 89.170 60.789 1.00 71.27 C
ATOM 7 C4' A A1237 11.894 90.609 61.209 1.00 73.84 C
ATOM 8 O4' A A1237 10.983 91.305 60.325 1.00 73.06 O
ATOM 9 C3' A A1237 11.324 90.833 62.599 1.00 76.78 C
ATOM 10 O3' A A1237 12.337 90.680 63.586 1.00 83.14 O
ATOM 11 C2' A A1237 10.784 92.254 62.497 1.00 75.36 C
ATOM 12 O2' A A1237 11.796 93.233 62.599 1.00 75.64 O
ATOM 13 C1' A A1237 10.257 92.268 61.058 1.00 72.88 C
ATOM 14 N9 A A1237 8.832 91.964 60.929 1.00 70.34 N
ATOM 15 C8 A A1237 8.194 90.746 60.936 1.00 69.42 C
ATOM 16 N7 A A1237 6.890 90.832 60.838 1.00 68.10 N
ATOM 17 C5 A A1237 6.654 92.198 60.755 1.00 69.56 C
ATOM 18 C6 A A1237 5.467 92.955 60.655 1.00 69.98 C
ATOM 19 N6 A A1237 4.246 92.417 60.647 1.00 70.30 N
ATOM 20 N1 A A1237 5.584 94.302 60.576 1.00 69.62 N
ATOM 21 C2 A A1237 6.813 94.840 60.612 1.00 68.92 C
ATOM 22 N3 A A1237 7.995 94.237 60.720 1.00 69.53 N
ATOM 23 C4 A A1237 7.843 92.903 60.789 1.00 69.60 C
ATOM 24 P U A1238 11.976 90.050 65.022 1.00 88.84 P
ATOM 25 OP1 U A1238 12.101 88.563 64.890 1.00 87.33 O
ATOM 26 OP2 U A1238 10.687 90.643 65.467 1.00 88.76 O
ATOM 27 O5' U A1238 13.152 90.589 65.967 1.00 93.39 O
TER
ATOM 1 O3' U B1235 4.725 86.300 59.210 1.00 61.82 O
ATOM 2 P C B1236 5.571 85.548 58.075 1.00 62.64 P
ATOM 3 OP1 C B1236 4.766 85.599 56.826 1.00 62.45 O
ATOM 4 OP2 C B1236 5.981 84.227 58.623 1.00 62.94 O
ATOM 5 O5' C B1236 6.863 86.465 57.883 1.00 62.19 O
ATOM 6 C5' C B1236 8.033 85.973 57.169 1.00 61.22 C
ATOM 7 C4' C B1236 9.055 87.080 56.999 1.00 61.21 C
ATOM 8 O4' C B1236 8.499 88.139 56.180 1.00 59.92 O
ATOM 9 C3' C B1236 9.456 87.790 58.279 1.00 61.27 C
ATOM 10 O3' C B1236 10.458 87.067 58.970 1.00 63.25 O
ATOM 11 C2' C B1236 9.973 89.128 57.772 1.00 60.47 C
ATOM 12 O2' C B1236 11.309 89.076 57.308 1.00 60.43 O
ATOM 13 C1' C B1236 9.022 89.391 56.600 1.00 58.81 C
ATOM 14 N1 C B1236 7.898 90.299 56.908 1.00 56.84 N
ATOM 15 C2 C B1236 8.121 91.687 56.880 1.00 56.50 C
ATOM 16 O2 C B1236 9.254 92.118 56.617 1.00 57.01 O
ATOM 17 N3 C B1236 7.097 92.526 57.135 1.00 56.58 N
ATOM 18 C4 C B1236 5.889 92.038 57.412 1.00 56.36 C
ATOM 19 N4 C B1236 4.906 92.910 57.641 1.00 57.15 N
ATOM 20 C5 C B1236 5.633 90.636 57.460 1.00 55.89 C
ATOM 21 C6 C B1236 6.656 89.810 57.204 1.00 55.98 C
ATOM 22 P A B1237 10.439 87.038 60.565 1.00 63.90 P
ATOM 23 OP1 A B1237 11.635 86.290 61.028 1.00 63.66 O
ATOM 24 OP2 A B1237 9.084 86.607 61.001 1.00 64.38 O
ATOM 25 O5' A B1237 10.662 88.560 60.963 1.00 66.88 O
TER
Atoms:
OP1: (11.635,86.290,61.028)
OP2: (9.084,86.607,61.001)
C3': (11.324,90.833,62.599)
C1': (10.257,92.268,61.058)
C5': (11.950,89.170,60.789)
O4': (10.983,91.305,60.325)
C8: (8.194,90.746,60.936)
O2': (11.796,93.233,62.599)
C6: (5.467,92.955,60.655)
C5: (6.654,92.198,60.755)
C4: (7.843,92.903,60.789)
P: (10.439,87.038,60.565)
C4': (11.894,90.609,61.209)
C2': (10.784,92.254,62.497)
C2: (6.813,94.840,60.612)
N1: (5.584,94.302,60.576)
N3: (7.995,94.237,60.720)
N6: (4.246,92.417,60.647)
N7: (6.890,90.832,60.838)
N9: (8.832,91.964,60.929)
O5': (10.662,88.560,60.963)
O3': (12.337,90.680,63.586)
OP2: (9.084,86.607,61.001)
C3': (11.324,90.833,62.599)
C1': (10.257,92.268,61.058)
C5': (11.950,89.170,60.789)
O4': (10.983,91.305,60.325)
C8: (8.194,90.746,60.936)
O2': (11.796,93.233,62.599)
C6: (5.467,92.955,60.655)
C5: (6.654,92.198,60.755)
C4: (7.843,92.903,60.789)
P: (10.439,87.038,60.565)
C4': (11.894,90.609,61.209)
C2': (10.784,92.254,62.497)
C2: (6.813,94.840,60.612)
N1: (5.584,94.302,60.576)
N3: (7.995,94.237,60.720)
N6: (4.246,92.417,60.647)
N7: (6.890,90.832,60.838)
N9: (8.832,91.964,60.929)
O5': (10.662,88.560,60.963)
O3': (12.337,90.680,63.586)
C2: (8.121,91.687,56.880)
OP1: (4.766,85.599,56.826)
OP2: (5.981,84.227,58.623)
C4: (5.889,92.038,57.412)
O5': (6.863,86.465,57.883)
C3': (9.456,87.790,58.279)
C1': (9.022,89.391,56.600)
O4': (8.499,88.139,56.180)
C5': (8.033,85.973,57.169)
P: (5.571,85.548,58.075)
O2: (9.254,92.118,56.617)
C4': (9.055,87.080,56.999)
C2': (9.973,89.128,57.772)
O2': (11.309,89.076,57.308)
N1: (7.898,90.299,56.908)
N3: (7.097,92.526,57.135)
N4: (4.906,92.910,57.641)
C6: (6.656,89.810,57.204)
C5: (5.633,90.636,57.460)
O3': (10.458,87.067,58.970)
OP1: (4.766,85.599,56.826)
OP2: (5.981,84.227,58.623)
C4: (5.889,92.038,57.412)
O5': (6.863,86.465,57.883)
C3': (9.456,87.790,58.279)
C1': (9.022,89.391,56.600)
O4': (8.499,88.139,56.180)
C5': (8.033,85.973,57.169)
P: (5.571,85.548,58.075)
O2: (9.254,92.118,56.617)
C4': (9.055,87.080,56.999)
C2': (9.973,89.128,57.772)
O2': (11.309,89.076,57.308)
N1: (7.898,90.299,56.908)
N3: (7.097,92.526,57.135)
N4: (4.906,92.910,57.641)
C6: (6.656,89.810,57.204)
C5: (5.633,90.636,57.460)
O3': (10.458,87.067,58.970)
Image (generated by PyMOL):