ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A2644:A2643

Extra

PDB:
ATOM 1 O3' C A2643 38.840 137.885 144.081 1.00 63.39 O
ATOM 2 P A A2644 39.338 139.298 143.498 1.00 63.15 P
ATOM 3 OP1 A A2644 38.129 140.142 143.395 1.00 63.95 O
ATOM 4 OP2 A A2644 40.182 139.071 142.296 1.00 61.83 O
ATOM 5 O5' A A2644 40.272 139.884 144.641 1.00 62.70 O
ATOM 6 C5' A A2644 39.756 140.196 145.944 1.00 62.75 C
ATOM 7 C4' A A2644 40.889 140.592 146.854 1.00 61.66 C
ATOM 8 O4' A A2644 41.808 139.483 146.992 1.00 61.84 O
ATOM 9 C3' A A2644 41.727 141.732 146.302 1.00 61.01 C
ATOM 10 O3' A A2644 41.181 142.969 146.721 1.00 57.34 O
ATOM 11 C2' A A2644 43.091 141.495 146.930 1.00 62.37 C
ATOM 12 O2' A A2644 43.261 142.062 148.208 1.00 64.76 O
ATOM 13 C1' A A2644 43.136 139.969 146.993 1.00 62.66 C
ATOM 14 N9 A A2644 43.824 139.418 145.840 1.00 63.71 N
ATOM 15 C8 A A2644 43.330 139.126 144.594 1.00 64.66 C
ATOM 16 N7 A A2644 44.233 138.657 143.767 1.00 65.61 N
ATOM 17 C5 A A2644 45.399 138.635 144.526 1.00 65.29 C
ATOM 18 C6 A A2644 46.712 138.241 144.229 1.00 64.36 C
ATOM 19 N6 A A2644 47.090 137.790 143.029 1.00 63.76 N
ATOM 20 N1 A A2644 47.632 138.331 145.213 1.00 63.19 N
ATOM 21 C2 A A2644 47.248 138.801 146.407 1.00 63.23 C
ATOM 22 N3 A A2644 46.046 139.213 146.805 1.00 64.07 N
ATOM 23 C4 A A2644 45.156 139.098 145.804 1.00 64.88 C
ATOM 24 P C A2645 40.842 144.093 145.651 1.00 54.69 P
ATOM 25 OP1 C A2645 40.336 145.232 146.457 1.00 53.76 O
ATOM 26 OP2 C A2645 39.963 143.461 144.645 1.00 53.13 O
ATOM 27 O5' C A2645 42.256 144.478 145.021 1.00 51.19 O
TER

ATOM 1 O3' C B2642 40.348 132.633 141.275 1.00 56.40 O
ATOM 2 P C B2643 40.626 134.201 140.919 1.00 57.03 P
ATOM 3 OP1 C B2643 39.535 134.690 140.035 1.00 56.00 O
ATOM 4 OP2 C B2643 42.033 134.449 140.534 1.00 54.91 O
ATOM 5 O5' C B2643 40.395 134.951 142.297 1.00 58.53 O
ATOM 6 C5' C B2643 39.104 134.925 142.930 1.00 60.80 C
ATOM 7 C4' C B2643 39.204 135.492 144.316 1.00 62.46 C
ATOM 8 O4' C B2643 40.135 134.703 145.095 1.00 62.93 O
ATOM 9 C3' C B2643 39.793 136.886 144.412 1.00 63.17 C
ATOM 10 O3' C B2643 38.840 137.885 144.081 1.00 63.39 O
ATOM 11 C2' C B2643 40.201 136.943 145.875 1.00 63.79 C
ATOM 12 O2' C B2643 39.112 137.150 146.754 1.00 65.15 O
ATOM 13 C1' C B2643 40.738 135.528 146.079 1.00 63.31 C
ATOM 14 N1 C B2643 42.200 135.476 145.933 1.00 62.65 N
ATOM 15 C2 C B2643 42.987 135.920 147.000 1.00 62.66 C
ATOM 16 O2 C B2643 42.426 136.327 148.024 1.00 62.99 O
ATOM 17 N3 C B2643 44.330 135.898 146.885 1.00 62.11 N
ATOM 18 C4 C B2643 44.894 135.447 145.763 1.00 62.29 C
ATOM 19 N4 C B2643 46.224 135.441 145.693 1.00 62.07 N
ATOM 20 C5 C B2643 44.117 134.982 144.661 1.00 62.54 C
ATOM 21 C6 C B2643 42.786 135.015 144.788 1.00 62.15 C
ATOM 22 P A B2644 39.338 139.298 143.498 1.00 63.15 P
ATOM 23 OP1 A B2644 38.129 140.142 143.395 1.00 63.95 O
ATOM 24 OP2 A B2644 40.182 139.071 142.296 1.00 61.83 O
ATOM 25 O5' A B2644 40.272 139.884 144.641 1.00 62.70 O
TER

Atoms:
OP1: (38.129,140.142,143.395)
OP2: (40.182,139.071,142.296)
C3': (41.727,141.732,146.302)
C1': (43.136,139.969,146.993)
C5': (39.756,140.196,145.944)
O4': (41.808,139.483,146.992)
C8: (43.330,139.126,144.594)
O2': (43.261,142.062,148.208)
C6: (46.712,138.241,144.229)
C5: (45.399,138.635,144.526)
C4: (45.156,139.098,145.804)
P: (39.338,139.298,143.498)
C4': (40.889,140.592,146.854)
C2': (43.091,141.495,146.930)
C2: (47.248,138.801,146.407)
N1: (47.632,138.331,145.213)
N3: (46.046,139.213,146.805)
N6: (47.090,137.790,143.029)
N7: (44.233,138.657,143.767)
N9: (43.824,139.418,145.840)
O5': (40.272,139.884,144.641)
O3': (41.181,142.969,146.721)
C2: (42.987,135.920,147.000)
OP1: (39.535,134.690,140.035)
OP2: (42.033,134.449,140.534)
C4: (44.894,135.447,145.763)
O5': (40.395,134.951,142.297)
C3': (39.793,136.886,144.412)
C1': (40.738,135.528,146.079)
O4': (40.135,134.703,145.095)
C5': (39.104,134.925,142.930)
P: (40.626,134.201,140.919)
O2: (42.426,136.327,148.024)
C4': (39.204,135.492,144.316)
C2': (40.201,136.943,145.875)
O2': (39.112,137.150,146.754)
N1: (42.200,135.476,145.933)
N3: (44.330,135.898,146.885)
N4: (46.224,135.441,145.693)
C6: (42.786,135.015,144.788)
C5: (44.117,134.982,144.661)
O3': (38.840,137.885,144.081)
Image (generated by PyMOL):
PyMOL image
show in jmol