Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2008:A2007
Extra
PDB:
ATOM 1 O3' C A2007 32.335 131.222 98.547 1.00 35.16 O
ATOM 2 P A A2008 32.653 132.645 99.192 1.00 34.13 P
ATOM 3 OP1 A A2008 31.499 133.153 99.939 1.00 32.65 O
ATOM 4 OP2 A A2008 33.292 133.485 98.151 1.00 31.79 O
ATOM 5 O5' A A2008 33.703 132.244 100.297 1.00 33.54 O
ATOM 6 C5' A A2008 33.298 131.458 101.414 1.00 34.48 C
ATOM 7 C4' A A2008 34.475 131.231 102.303 1.00 35.67 C
ATOM 8 O4' A A2008 35.526 130.619 101.523 1.00 35.43 O
ATOM 9 C3' A A2008 35.098 132.502 102.843 1.00 34.77 C
ATOM 10 O3' A A2008 34.487 132.868 104.071 1.00 34.60 O
ATOM 11 C2' A A2008 36.529 132.077 103.096 1.00 35.34 C
ATOM 12 O2' A A2008 36.572 131.354 104.308 1.00 36.91 O
ATOM 13 C1' A A2008 36.773 131.110 101.946 1.00 36.07 C
ATOM 14 N9 A A2008 37.439 131.743 100.818 1.00 37.60 N
ATOM 15 C8 A A2008 36.904 132.458 99.778 1.00 39.44 C
ATOM 16 N7 A A2008 37.790 132.870 98.907 1.00 38.67 N
ATOM 17 C5 A A2008 38.989 132.403 99.416 1.00 39.56 C
ATOM 18 C6 A A2008 40.299 132.498 98.948 1.00 40.11 C
ATOM 19 N6 A A2008 40.619 133.111 97.812 1.00 40.87 N
ATOM 20 N1 A A2008 41.270 131.933 99.686 1.00 38.88 N
ATOM 21 C2 A A2008 40.922 131.305 100.814 1.00 39.37 C
ATOM 22 N3 A A2008 39.720 131.136 101.354 1.00 38.43 N
ATOM 23 C4 A A2008 38.787 131.718 100.596 1.00 38.63 C
ATOM 24 P U A2009 34.604 134.376 104.601 1.00 35.62 P
ATOM 25 OP1 U A2009 33.217 134.727 104.943 1.00 34.83 O
ATOM 26 OP2 U A2009 35.364 135.214 103.662 1.00 32.61 O
ATOM 27 O5' U A2009 35.479 134.303 105.923 1.00 33.97 O
TER
ATOM 1 O3' A B2006 34.402 130.281 92.858 1.00 32.60 O
ATOM 2 P C B2007 34.393 131.638 93.720 1.00 32.41 P
ATOM 3 OP1 C B2007 33.253 132.469 93.294 1.00 33.78 O
ATOM 4 OP2 C B2007 35.762 132.187 93.644 1.00 32.89 O
ATOM 5 O5' C B2007 34.080 131.129 95.194 1.00 32.93 O
ATOM 6 C5' C B2007 32.889 130.378 95.461 1.00 32.70 C
ATOM 7 C4' C B2007 32.989 129.652 96.778 1.00 35.51 C
ATOM 8 O4' C B2007 33.967 128.588 96.714 1.00 36.49 O
ATOM 9 C3' C B2007 33.406 130.475 97.981 1.00 35.71 C
ATOM 10 O3' C B2007 32.335 131.222 98.547 1.00 35.16 O
ATOM 11 C2' C B2007 33.923 129.419 98.942 1.00 36.70 C
ATOM 12 O2' C B2007 32.859 128.830 99.660 1.00 37.02 O
ATOM 13 C1' C B2007 34.572 128.426 97.983 1.00 37.92 C
ATOM 14 N1 C B2007 35.984 128.772 97.872 1.00 39.33 N
ATOM 15 C2 C B2007 36.851 128.289 98.832 1.00 40.48 C
ATOM 16 O2 C B2007 36.409 127.543 99.714 1.00 40.36 O
ATOM 17 N3 C B2007 38.150 128.641 98.784 1.00 40.34 N
ATOM 18 C4 C B2007 38.586 129.447 97.816 1.00 39.50 C
ATOM 19 N4 C B2007 39.867 129.784 97.828 1.00 37.12 N
ATOM 20 C5 C B2007 37.721 129.942 96.802 1.00 40.38 C
ATOM 21 C6 C B2007 36.441 129.575 96.865 1.00 39.69 C
ATOM 22 P A B2008 32.653 132.645 99.192 1.00 34.13 P
ATOM 23 OP1 A B2008 31.499 133.153 99.939 1.00 32.65 O
ATOM 24 OP2 A B2008 33.292 133.485 98.151 1.00 31.79 O
ATOM 25 O5' A B2008 33.703 132.244 100.297 1.00 33.54 O
TER
ATOM 2 P A A2008 32.653 132.645 99.192 1.00 34.13 P
ATOM 3 OP1 A A2008 31.499 133.153 99.939 1.00 32.65 O
ATOM 4 OP2 A A2008 33.292 133.485 98.151 1.00 31.79 O
ATOM 5 O5' A A2008 33.703 132.244 100.297 1.00 33.54 O
ATOM 6 C5' A A2008 33.298 131.458 101.414 1.00 34.48 C
ATOM 7 C4' A A2008 34.475 131.231 102.303 1.00 35.67 C
ATOM 8 O4' A A2008 35.526 130.619 101.523 1.00 35.43 O
ATOM 9 C3' A A2008 35.098 132.502 102.843 1.00 34.77 C
ATOM 10 O3' A A2008 34.487 132.868 104.071 1.00 34.60 O
ATOM 11 C2' A A2008 36.529 132.077 103.096 1.00 35.34 C
ATOM 12 O2' A A2008 36.572 131.354 104.308 1.00 36.91 O
ATOM 13 C1' A A2008 36.773 131.110 101.946 1.00 36.07 C
ATOM 14 N9 A A2008 37.439 131.743 100.818 1.00 37.60 N
ATOM 15 C8 A A2008 36.904 132.458 99.778 1.00 39.44 C
ATOM 16 N7 A A2008 37.790 132.870 98.907 1.00 38.67 N
ATOM 17 C5 A A2008 38.989 132.403 99.416 1.00 39.56 C
ATOM 18 C6 A A2008 40.299 132.498 98.948 1.00 40.11 C
ATOM 19 N6 A A2008 40.619 133.111 97.812 1.00 40.87 N
ATOM 20 N1 A A2008 41.270 131.933 99.686 1.00 38.88 N
ATOM 21 C2 A A2008 40.922 131.305 100.814 1.00 39.37 C
ATOM 22 N3 A A2008 39.720 131.136 101.354 1.00 38.43 N
ATOM 23 C4 A A2008 38.787 131.718 100.596 1.00 38.63 C
ATOM 24 P U A2009 34.604 134.376 104.601 1.00 35.62 P
ATOM 25 OP1 U A2009 33.217 134.727 104.943 1.00 34.83 O
ATOM 26 OP2 U A2009 35.364 135.214 103.662 1.00 32.61 O
ATOM 27 O5' U A2009 35.479 134.303 105.923 1.00 33.97 O
TER
ATOM 1 O3' A B2006 34.402 130.281 92.858 1.00 32.60 O
ATOM 2 P C B2007 34.393 131.638 93.720 1.00 32.41 P
ATOM 3 OP1 C B2007 33.253 132.469 93.294 1.00 33.78 O
ATOM 4 OP2 C B2007 35.762 132.187 93.644 1.00 32.89 O
ATOM 5 O5' C B2007 34.080 131.129 95.194 1.00 32.93 O
ATOM 6 C5' C B2007 32.889 130.378 95.461 1.00 32.70 C
ATOM 7 C4' C B2007 32.989 129.652 96.778 1.00 35.51 C
ATOM 8 O4' C B2007 33.967 128.588 96.714 1.00 36.49 O
ATOM 9 C3' C B2007 33.406 130.475 97.981 1.00 35.71 C
ATOM 10 O3' C B2007 32.335 131.222 98.547 1.00 35.16 O
ATOM 11 C2' C B2007 33.923 129.419 98.942 1.00 36.70 C
ATOM 12 O2' C B2007 32.859 128.830 99.660 1.00 37.02 O
ATOM 13 C1' C B2007 34.572 128.426 97.983 1.00 37.92 C
ATOM 14 N1 C B2007 35.984 128.772 97.872 1.00 39.33 N
ATOM 15 C2 C B2007 36.851 128.289 98.832 1.00 40.48 C
ATOM 16 O2 C B2007 36.409 127.543 99.714 1.00 40.36 O
ATOM 17 N3 C B2007 38.150 128.641 98.784 1.00 40.34 N
ATOM 18 C4 C B2007 38.586 129.447 97.816 1.00 39.50 C
ATOM 19 N4 C B2007 39.867 129.784 97.828 1.00 37.12 N
ATOM 20 C5 C B2007 37.721 129.942 96.802 1.00 40.38 C
ATOM 21 C6 C B2007 36.441 129.575 96.865 1.00 39.69 C
ATOM 22 P A B2008 32.653 132.645 99.192 1.00 34.13 P
ATOM 23 OP1 A B2008 31.499 133.153 99.939 1.00 32.65 O
ATOM 24 OP2 A B2008 33.292 133.485 98.151 1.00 31.79 O
ATOM 25 O5' A B2008 33.703 132.244 100.297 1.00 33.54 O
TER
Atoms:
OP1: (31.499,133.153,99.939)
OP2: (33.292,133.485,98.151)
C3': (35.098,132.502,102.843)
C1': (36.773,131.110,101.946)
C5': (33.298,131.458,101.414)
O4': (35.526,130.619,101.523)
C8: (36.904,132.458,99.778)
O2': (36.572,131.354,104.308)
C6: (40.299,132.498,98.948)
C5: (38.989,132.403,99.416)
C4: (38.787,131.718,100.596)
P: (32.653,132.645,99.192)
C4': (34.475,131.231,102.303)
C2': (36.529,132.077,103.096)
C2: (40.922,131.305,100.814)
N1: (41.270,131.933,99.686)
N3: (39.720,131.136,101.354)
N6: (40.619,133.111,97.812)
N7: (37.790,132.870,98.907)
N9: (37.439,131.743,100.818)
O5': (33.703,132.244,100.297)
O3': (34.487,132.868,104.071)
OP2: (33.292,133.485,98.151)
C3': (35.098,132.502,102.843)
C1': (36.773,131.110,101.946)
C5': (33.298,131.458,101.414)
O4': (35.526,130.619,101.523)
C8: (36.904,132.458,99.778)
O2': (36.572,131.354,104.308)
C6: (40.299,132.498,98.948)
C5: (38.989,132.403,99.416)
C4: (38.787,131.718,100.596)
P: (32.653,132.645,99.192)
C4': (34.475,131.231,102.303)
C2': (36.529,132.077,103.096)
C2: (40.922,131.305,100.814)
N1: (41.270,131.933,99.686)
N3: (39.720,131.136,101.354)
N6: (40.619,133.111,97.812)
N7: (37.790,132.870,98.907)
N9: (37.439,131.743,100.818)
O5': (33.703,132.244,100.297)
O3': (34.487,132.868,104.071)
C2: (36.851,128.289,98.832)
OP1: (33.253,132.469,93.294)
OP2: (35.762,132.187,93.644)
C4: (38.586,129.447,97.816)
O5': (34.080,131.129,95.194)
C3': (33.406,130.475,97.981)
C1': (34.572,128.426,97.983)
O4': (33.967,128.588,96.714)
C5': (32.889,130.378,95.461)
P: (34.393,131.638,93.720)
O2: (36.409,127.543,99.714)
C4': (32.989,129.652,96.778)
C2': (33.923,129.419,98.942)
O2': (32.859,128.830,99.660)
N1: (35.984,128.772,97.872)
N3: (38.150,128.641,98.784)
N4: (39.867,129.784,97.828)
C6: (36.441,129.575,96.865)
C5: (37.721,129.942,96.802)
O3': (32.335,131.222,98.547)
OP1: (33.253,132.469,93.294)
OP2: (35.762,132.187,93.644)
C4: (38.586,129.447,97.816)
O5': (34.080,131.129,95.194)
C3': (33.406,130.475,97.981)
C1': (34.572,128.426,97.983)
O4': (33.967,128.588,96.714)
C5': (32.889,130.378,95.461)
P: (34.393,131.638,93.720)
O2: (36.409,127.543,99.714)
C4': (32.989,129.652,96.778)
C2': (33.923,129.419,98.942)
O2': (32.859,128.830,99.660)
N1: (35.984,128.772,97.872)
N3: (38.150,128.641,98.784)
N4: (39.867,129.784,97.828)
C6: (36.441,129.575,96.865)
C5: (37.721,129.942,96.802)
O3': (32.335,131.222,98.547)
Image (generated by PyMOL):