Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1544:A1543
Extra
PDB:
ATOM 1 O3' C A1543 -2.577 -20.221 -7.528 1.00 7.46 O
ATOM 2 P A A1544 -3.870 -19.923 -6.603 1.00 1.98 P
ATOM 3 OP1 A A1544 -4.671 -18.904 -7.336 1.00 1.98 O
ATOM 4 OP2 A A1544 -3.390 -19.606 -5.215 1.00 1.98 O
ATOM 5 O5' A A1544 -4.645 -21.315 -6.596 1.00 1.98 O
ATOM 6 C5' A A1544 -5.479 -21.687 -7.681 1.00 1.98 C
ATOM 7 C4' A A1544 -6.252 -22.944 -7.383 1.00 1.98 C
ATOM 8 O4' A A1544 -5.336 -24.032 -7.129 1.00 1.98 O
ATOM 9 C3' A A1544 -7.133 -22.907 -6.157 1.00 1.98 C
ATOM 10 O3' A A1544 -8.379 -22.297 -6.403 1.00 1.98 O
ATOM 11 C2' A A1544 -7.248 -24.369 -5.807 1.00 1.98 C
ATOM 12 O2' A A1544 -8.154 -24.996 -6.675 1.00 1.98 O
ATOM 13 C1' A A1544 -5.853 -24.873 -6.137 1.00 1.98 C
ATOM 14 N9 A A1544 -4.967 -24.806 -4.968 1.00 1.57 N
ATOM 15 C8 A A1544 -4.047 -23.829 -4.681 1.00 1.57 C
ATOM 16 N7 A A1544 -3.421 -24.000 -3.549 1.00 1.57 N
ATOM 17 C5 A A1544 -3.972 -25.170 -3.047 1.00 1.57 C
ATOM 18 C6 A A1544 -3.735 -25.893 -1.869 1.00 1.57 C
ATOM 19 N6 A A1544 -2.856 -25.547 -0.944 1.00 1.57 N
ATOM 20 N1 A A1544 -4.431 -27.011 -1.674 1.00 1.57 N
ATOM 21 C2 A A1544 -5.320 -27.376 -2.592 1.00 1.57 C
ATOM 22 N3 A A1544 -5.645 -26.791 -3.733 1.00 1.57 N
ATOM 23 C4 A A1544 -4.922 -25.678 -3.912 1.00 1.57 C
ATOM 24 P A A1545 -8.953 -21.185 -5.389 1.00 14.63 P
ATOM 25 OP1 A A1545 -10.080 -20.520 -6.064 1.00 14.63 O
ATOM 26 OP2 A A1545 -7.808 -20.359 -4.945 1.00 14.63 O
ATOM 27 O5' A A1545 -9.491 -22.053 -4.169 1.00 14.63 O
TER
ATOM 1 O3' A B1542 3.489 -20.326 -6.210 1.00 7.24 O
ATOM 2 P C B1543 2.121 -19.755 -5.603 1.00 7.46 P
ATOM 3 OP1 C B1543 1.984 -18.361 -6.075 1.00 7.46 O
ATOM 4 OP2 C B1543 2.143 -20.011 -4.140 1.00 7.46 O
ATOM 5 O5' C B1543 1.029 -20.661 -6.307 1.00 7.46 O
ATOM 6 C5' C B1543 0.628 -20.392 -7.639 1.00 7.46 C
ATOM 7 C4' C B1543 -0.463 -21.323 -8.094 1.00 7.46 C
ATOM 8 O4' C B1543 0.000 -22.696 -8.032 1.00 7.46 O
ATOM 9 C3' C B1543 -1.725 -21.322 -7.253 1.00 7.46 C
ATOM 10 O3' C B1543 -2.577 -20.221 -7.528 1.00 7.46 O
ATOM 11 C2' C B1543 -2.324 -22.678 -7.593 1.00 7.46 C
ATOM 12 O2' C B1543 -2.937 -22.662 -8.879 1.00 7.46 O
ATOM 13 C1' C B1543 -1.064 -23.540 -7.660 1.00 7.46 C
ATOM 14 N1 C B1543 -0.734 -24.148 -6.352 1.00 7.31 N
ATOM 15 C2 C B1543 -1.111 -25.457 -6.059 1.00 7.31 C
ATOM 16 O2 C B1543 -1.740 -26.079 -6.941 1.00 7.31 O
ATOM 17 N3 C B1543 -0.773 -25.995 -4.856 1.00 7.31 N
ATOM 18 C4 C B1543 -0.091 -25.283 -3.975 1.00 7.31 C
ATOM 19 N4 C B1543 0.239 -25.796 -2.792 1.00 7.31 N
ATOM 20 C5 C B1543 0.294 -23.969 -4.263 1.00 7.31 C
ATOM 21 C6 C B1543 -0.032 -23.448 -5.444 1.00 7.31 C
ATOM 22 P A B1544 -3.870 -19.923 -6.603 1.00 1.98 P
ATOM 23 OP1 A B1544 -4.671 -18.904 -7.336 1.00 1.98 O
ATOM 24 OP2 A B1544 -3.390 -19.606 -5.215 1.00 1.98 O
ATOM 25 O5' A B1544 -4.645 -21.315 -6.596 1.00 1.98 O
TER
ATOM 2 P A A1544 -3.870 -19.923 -6.603 1.00 1.98 P
ATOM 3 OP1 A A1544 -4.671 -18.904 -7.336 1.00 1.98 O
ATOM 4 OP2 A A1544 -3.390 -19.606 -5.215 1.00 1.98 O
ATOM 5 O5' A A1544 -4.645 -21.315 -6.596 1.00 1.98 O
ATOM 6 C5' A A1544 -5.479 -21.687 -7.681 1.00 1.98 C
ATOM 7 C4' A A1544 -6.252 -22.944 -7.383 1.00 1.98 C
ATOM 8 O4' A A1544 -5.336 -24.032 -7.129 1.00 1.98 O
ATOM 9 C3' A A1544 -7.133 -22.907 -6.157 1.00 1.98 C
ATOM 10 O3' A A1544 -8.379 -22.297 -6.403 1.00 1.98 O
ATOM 11 C2' A A1544 -7.248 -24.369 -5.807 1.00 1.98 C
ATOM 12 O2' A A1544 -8.154 -24.996 -6.675 1.00 1.98 O
ATOM 13 C1' A A1544 -5.853 -24.873 -6.137 1.00 1.98 C
ATOM 14 N9 A A1544 -4.967 -24.806 -4.968 1.00 1.57 N
ATOM 15 C8 A A1544 -4.047 -23.829 -4.681 1.00 1.57 C
ATOM 16 N7 A A1544 -3.421 -24.000 -3.549 1.00 1.57 N
ATOM 17 C5 A A1544 -3.972 -25.170 -3.047 1.00 1.57 C
ATOM 18 C6 A A1544 -3.735 -25.893 -1.869 1.00 1.57 C
ATOM 19 N6 A A1544 -2.856 -25.547 -0.944 1.00 1.57 N
ATOM 20 N1 A A1544 -4.431 -27.011 -1.674 1.00 1.57 N
ATOM 21 C2 A A1544 -5.320 -27.376 -2.592 1.00 1.57 C
ATOM 22 N3 A A1544 -5.645 -26.791 -3.733 1.00 1.57 N
ATOM 23 C4 A A1544 -4.922 -25.678 -3.912 1.00 1.57 C
ATOM 24 P A A1545 -8.953 -21.185 -5.389 1.00 14.63 P
ATOM 25 OP1 A A1545 -10.080 -20.520 -6.064 1.00 14.63 O
ATOM 26 OP2 A A1545 -7.808 -20.359 -4.945 1.00 14.63 O
ATOM 27 O5' A A1545 -9.491 -22.053 -4.169 1.00 14.63 O
TER
ATOM 1 O3' A B1542 3.489 -20.326 -6.210 1.00 7.24 O
ATOM 2 P C B1543 2.121 -19.755 -5.603 1.00 7.46 P
ATOM 3 OP1 C B1543 1.984 -18.361 -6.075 1.00 7.46 O
ATOM 4 OP2 C B1543 2.143 -20.011 -4.140 1.00 7.46 O
ATOM 5 O5' C B1543 1.029 -20.661 -6.307 1.00 7.46 O
ATOM 6 C5' C B1543 0.628 -20.392 -7.639 1.00 7.46 C
ATOM 7 C4' C B1543 -0.463 -21.323 -8.094 1.00 7.46 C
ATOM 8 O4' C B1543 0.000 -22.696 -8.032 1.00 7.46 O
ATOM 9 C3' C B1543 -1.725 -21.322 -7.253 1.00 7.46 C
ATOM 10 O3' C B1543 -2.577 -20.221 -7.528 1.00 7.46 O
ATOM 11 C2' C B1543 -2.324 -22.678 -7.593 1.00 7.46 C
ATOM 12 O2' C B1543 -2.937 -22.662 -8.879 1.00 7.46 O
ATOM 13 C1' C B1543 -1.064 -23.540 -7.660 1.00 7.46 C
ATOM 14 N1 C B1543 -0.734 -24.148 -6.352 1.00 7.31 N
ATOM 15 C2 C B1543 -1.111 -25.457 -6.059 1.00 7.31 C
ATOM 16 O2 C B1543 -1.740 -26.079 -6.941 1.00 7.31 O
ATOM 17 N3 C B1543 -0.773 -25.995 -4.856 1.00 7.31 N
ATOM 18 C4 C B1543 -0.091 -25.283 -3.975 1.00 7.31 C
ATOM 19 N4 C B1543 0.239 -25.796 -2.792 1.00 7.31 N
ATOM 20 C5 C B1543 0.294 -23.969 -4.263 1.00 7.31 C
ATOM 21 C6 C B1543 -0.032 -23.448 -5.444 1.00 7.31 C
ATOM 22 P A B1544 -3.870 -19.923 -6.603 1.00 1.98 P
ATOM 23 OP1 A B1544 -4.671 -18.904 -7.336 1.00 1.98 O
ATOM 24 OP2 A B1544 -3.390 -19.606 -5.215 1.00 1.98 O
ATOM 25 O5' A B1544 -4.645 -21.315 -6.596 1.00 1.98 O
TER
Atoms:
OP1: (-4.671,-18.904,-7.336)
OP2: (-3.390,-19.606,-5.215)
C3': (-7.133,-22.907,-6.157)
C1': (-5.853,-24.873,-6.137)
C5': (-5.479,-21.687,-7.681)
O4': (-5.336,-24.032,-7.129)
C8: (-4.047,-23.829,-4.681)
O2': (-8.154,-24.996,-6.675)
C6: (-3.735,-25.893,-1.869)
C5: (-3.972,-25.170,-3.047)
C4: (-4.922,-25.678,-3.912)
P: (-3.870,-19.923,-6.603)
C4': (-6.252,-22.944,-7.383)
C2': (-7.248,-24.369,-5.807)
C2: (-5.320,-27.376,-2.592)
N1: (-4.431,-27.011,-1.674)
N3: (-5.645,-26.791,-3.733)
N6: (-2.856,-25.547,-0.944)
N7: (-3.421,-24.000,-3.549)
N9: (-4.967,-24.806,-4.968)
O5': (-4.645,-21.315,-6.596)
O3': (-8.379,-22.297,-6.403)
OP2: (-3.390,-19.606,-5.215)
C3': (-7.133,-22.907,-6.157)
C1': (-5.853,-24.873,-6.137)
C5': (-5.479,-21.687,-7.681)
O4': (-5.336,-24.032,-7.129)
C8: (-4.047,-23.829,-4.681)
O2': (-8.154,-24.996,-6.675)
C6: (-3.735,-25.893,-1.869)
C5: (-3.972,-25.170,-3.047)
C4: (-4.922,-25.678,-3.912)
P: (-3.870,-19.923,-6.603)
C4': (-6.252,-22.944,-7.383)
C2': (-7.248,-24.369,-5.807)
C2: (-5.320,-27.376,-2.592)
N1: (-4.431,-27.011,-1.674)
N3: (-5.645,-26.791,-3.733)
N6: (-2.856,-25.547,-0.944)
N7: (-3.421,-24.000,-3.549)
N9: (-4.967,-24.806,-4.968)
O5': (-4.645,-21.315,-6.596)
O3': (-8.379,-22.297,-6.403)
C2: (-1.111,-25.457,-6.059)
OP1: (1.984,-18.361,-6.075)
OP2: (2.143,-20.011,-4.140)
C4: (-0.091,-25.283,-3.975)
O5': (1.029,-20.661,-6.307)
C3': (-1.725,-21.322,-7.253)
C1': (-1.064,-23.540,-7.660)
O4': (0.000,-22.696,-8.032)
C5': (0.628,-20.392,-7.639)
P: (2.121,-19.755,-5.603)
O2: (-1.740,-26.079,-6.941)
C4': (-0.463,-21.323,-8.094)
C2': (-2.324,-22.678,-7.593)
O2': (-2.937,-22.662,-8.879)
N1: (-0.734,-24.148,-6.352)
N3: (-0.773,-25.995,-4.856)
N4: (0.239,-25.796,-2.792)
C6: (-0.032,-23.448,-5.444)
C5: (0.294,-23.969,-4.263)
O3': (-2.577,-20.221,-7.528)
OP1: (1.984,-18.361,-6.075)
OP2: (2.143,-20.011,-4.140)
C4: (-0.091,-25.283,-3.975)
O5': (1.029,-20.661,-6.307)
C3': (-1.725,-21.322,-7.253)
C1': (-1.064,-23.540,-7.660)
O4': (0.000,-22.696,-8.032)
C5': (0.628,-20.392,-7.639)
P: (2.121,-19.755,-5.603)
O2: (-1.740,-26.079,-6.941)
C4': (-0.463,-21.323,-8.094)
C2': (-2.324,-22.678,-7.593)
O2': (-2.937,-22.662,-8.879)
N1: (-0.734,-24.148,-6.352)
N3: (-0.773,-25.995,-4.856)
N4: (0.239,-25.796,-2.792)
C6: (-0.032,-23.448,-5.444)
C5: (0.294,-23.969,-4.263)
O3': (-2.577,-20.221,-7.528)
Image (generated by PyMOL):