ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CCV:0539:0538

Extra

PDB:
ATOM 1 O3' C A 538 -2.152 133.773 77.590 1.00 51.64 O
ATOM 2 P A A 539 -1.907 132.191 77.621 1.00 53.38 P
ATOM 3 OP1 A A 539 -3.220 131.526 77.437 1.00 54.40 O
ATOM 4 OP2 A A 539 -1.098 131.892 78.833 1.00 52.14 O
ATOM 5 O5' A A 539 -1.044 131.908 76.311 1.00 50.48 O
ATOM 6 C5' A A 539 -1.569 132.190 74.997 1.00 47.53 C
ATOM 7 C4' A A 539 -0.461 132.134 73.978 1.00 46.83 C
ATOM 8 O4' A A 539 0.524 133.140 74.311 1.00 47.79 O
ATOM 9 C3' A A 539 0.310 130.825 73.963 1.00 46.86 C
ATOM 10 O3' A A 539 -0.318 129.908 73.078 1.00 47.36 O
ATOM 11 C2' A A 539 1.681 131.244 73.451 1.00 46.29 C
ATOM 12 O2' A A 539 1.702 131.376 72.050 1.00 44.52 O
ATOM 13 C1' A A 539 1.826 132.637 74.069 1.00 48.12 C
ATOM 14 N9 A A 539 2.584 132.715 75.321 1.00 49.74 N
ATOM 15 C8 A A 539 2.114 132.551 76.601 1.00 51.29 C
ATOM 16 N7 A A 539 3.023 132.734 77.527 1.00 51.21 N
ATOM 17 C5 A A 539 4.172 133.025 76.808 1.00 50.65 C
ATOM 18 C6 A A 539 5.481 133.325 77.209 1.00 51.39 C
ATOM 19 N6 A A 539 5.870 133.381 78.485 1.00 51.61 N
ATOM 20 N1 A A 539 6.393 133.569 76.241 1.00 52.16 N
ATOM 21 C2 A A 539 6.000 133.510 74.962 1.00 50.95 C
ATOM 22 N3 A A 539 4.801 133.239 74.463 1.00 50.07 N
ATOM 23 C4 A A 539 3.920 133.005 75.449 1.00 49.76 C
ATOM 24 P A A 540 -0.911 128.531 73.644 1.00 46.86 P
ATOM 25 OP1 A A 540 -2.016 128.106 72.745 1.00 46.47 O
ATOM 26 OP2 A A 540 -1.168 128.705 75.099 1.00 47.42 O
ATOM 27 O5' A A 540 0.287 127.506 73.452 1.00 45.54 O
TER

ATOM 1 O3' A B 537 0.120 136.221 82.700 1.00 59.20 O
ATOM 2 P C B 538 0.375 134.834 81.946 1.00 58.70 P
ATOM 3 OP1 C B 538 -0.545 133.831 82.532 1.00 58.92 O
ATOM 4 OP2 C B 538 1.837 134.584 81.963 1.00 58.89 O
ATOM 5 O5' C B 538 -0.050 135.129 80.437 1.00 57.55 O
ATOM 6 C5' C B 538 -1.363 135.610 80.101 1.00 53.19 C
ATOM 7 C4' C B 538 -1.459 135.841 78.611 1.00 53.35 C
ATOM 8 O4' C B 538 -0.537 136.890 78.218 1.00 55.02 O
ATOM 9 C3' C B 538 -1.057 134.654 77.757 1.00 53.03 C
ATOM 10 O3' C B 538 -2.152 133.773 77.590 1.00 51.64 O
ATOM 11 C2' C B 538 -0.637 135.302 76.443 1.00 54.07 C
ATOM 12 O2' C B 538 -1.723 135.626 75.604 1.00 55.24 O
ATOM 13 C1' C B 538 0.001 136.603 76.933 1.00 55.59 C
ATOM 14 N1 C B 538 1.472 136.578 77.036 1.00 57.13 N
ATOM 15 C2 C B 538 2.242 136.911 75.910 1.00 56.91 C
ATOM 16 O2 C B 538 1.669 137.160 74.838 1.00 56.88 O
ATOM 17 N3 C B 538 3.589 136.948 76.020 1.00 57.48 N
ATOM 18 C4 C B 538 4.173 136.652 77.187 1.00 59.42 C
ATOM 19 N4 C B 538 5.511 136.716 77.260 1.00 59.79 N
ATOM 20 C5 C B 538 3.416 136.280 78.336 1.00 59.10 C
ATOM 21 C6 C B 538 2.084 136.255 78.216 1.00 58.57 C
ATOM 22 P A B 539 -1.907 132.191 77.621 1.00 53.38 P
ATOM 23 OP1 A B 539 -3.220 131.526 77.437 1.00 54.40 O
ATOM 24 OP2 A B 539 -1.098 131.892 78.833 1.00 52.14 O
ATOM 25 O5' A B 539 -1.044 131.908 76.311 1.00 50.48 O
TER

Atoms:
OP1: (-3.220,131.526,77.437)
OP2: (-1.098,131.892,78.833)
C3': (0.310,130.825,73.963)
C1': (1.826,132.637,74.069)
C5': (-1.569,132.190,74.997)
O4': (0.524,133.140,74.311)
C8: (2.114,132.551,76.601)
O2': (1.702,131.376,72.050)
C6: (5.481,133.325,77.209)
C5: (4.172,133.025,76.808)
C4: (3.920,133.005,75.449)
P: (-1.907,132.191,77.621)
C4': (-0.461,132.134,73.978)
C2': (1.681,131.244,73.451)
C2: (6.000,133.510,74.962)
N1: (6.393,133.569,76.241)
N3: (4.801,133.239,74.463)
N6: (5.870,133.381,78.485)
N7: (3.023,132.734,77.527)
N9: (2.584,132.715,75.321)
O5': (-1.044,131.908,76.311)
O3': (-0.318,129.908,73.078)
C2: (2.242,136.911,75.910)
OP1: (-0.545,133.831,82.532)
OP2: (1.837,134.584,81.963)
C4: (4.173,136.652,77.187)
O5': (-0.050,135.129,80.437)
C3': (-1.057,134.654,77.757)
C1': (0.001,136.603,76.933)
O4': (-0.537,136.890,78.218)
C5': (-1.363,135.610,80.101)
P: (0.375,134.834,81.946)
O2: (1.669,137.160,74.838)
C4': (-1.459,135.841,78.611)
C2': (-0.637,135.302,76.443)
O2': (-1.723,135.626,75.604)
N1: (1.472,136.578,77.036)
N3: (3.589,136.948,76.020)
N4: (5.511,136.716,77.260)
C6: (2.084,136.255,78.216)
C5: (3.416,136.280,78.336)
O3': (-2.152,133.773,77.590)
Image (generated by PyMOL):
PyMOL image
show in jmol